RNA–Protein interactions for RNA: ENST00000330045.11

BRCC3-201, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

TSL 1 (best) BASIC

Gene BRCC3, Length 2,496 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-201ENST00000330045 ISXQ2M1V0 245 aa14.04□□□□□ -0.16
BRCC3-201ENST00000330045 OOSP2Q86WS3 158 aa14.04□□□□□ -0.16
BRCC3-201ENST00000330045 ZNF761Q86XN6 746 aaPredicted RBP14.04□□□□□ -0.16
BRCC3-201ENST00000330045 OR11G2Q8NGC1 345 aa14.04□□□□□ -0.16
BRCC3-201ENST00000330045 OR4C3Q8NH37 302 aa14.04□□□□□ -0.16
BRCC3-201ENST00000330045 OR52I2Q8NH67 350 aa14.04□□□□□ -0.16
BRCC3-201ENST00000330045 NXPE2Q96DL1 559 aa14.04□□□□□ -0.16
BRCC3-201ENST00000330045 SLC25A38Q96DW6 304 aa14.04□□□□□ -0.16
BRCC3-201ENST00000330045 WSB2Q9NYS7 404 aaPredicted RBP14.04□□□□□ -0.16
BRCC3-201ENST00000330045 EMC3Q9P0I2 261 aa14.04□□□□□ -0.16
BRCC3-201ENST00000330045 FLVCR2Q9UPI3 526 aa14.04□□□□□ -0.16
BRCC3-201ENST00000330045 V9GY05 133 aa14.04□□□□□ -0.16
BRCC3-201ENST00000330045 A0A1B0GTQ1 180 aa14.03□□□□□ -0.16
BRCC3-201ENST00000330045 A0A1B0GVT2 93 aa14.03□□□□□ -0.16
BRCC3-201ENST00000330045 SERINC4A6NH21 518 aa14.03□□□□□ -0.16
BRCC3-201ENST00000330045 FAM171A2A8MVW0 826 aa14.03□□□□□ -0.16
BRCC3-201ENST00000330045 ICMTO60725 284 aa14.03□□□□□ -0.16
BRCC3-201ENST00000330045 CDC123O75794 336 aaPredicted RBP14.03□□□□□ -0.16
BRCC3-201ENST00000330045 ZFPL1O95159 310 aa14.03□□□□□ -0.16
BRCC3-201ENST00000330045 TNFP01375 233 aa14.03□□□□□ -0.16
BRCC3-201ENST00000330045 PSMB1P20618 241 aaKnown RBP14.03□□□□□ -0.16
BRCC3-201ENST00000330045 ZNF81P51508 661 aa14.03□□□□□ -0.16
BRCC3-201ENST00000330045 ZP1P60852 638 aa14.03□□□□□ -0.16
BRCC3-201ENST00000330045 PRPS1P60891 318 aa14.03□□□□□ -0.16
BRCC3-201ENST00000330045 IL10RAQ13651 578 aa14.03□□□□□ -0.16
BRCC3-201ENST00000330045 ZNF267Q14586 743 aaPredicted RBP14.03□□□□□ -0.16
BRCC3-201ENST00000330045 SERPINA12Q8IW75 414 aa14.03□□□□□ -0.16
BRCC3-201ENST00000330045 SUN5Q8TC36 379 aa14.03□□□□□ -0.16
BRCC3-201ENST00000330045 SLC37A2Q8TED4 501 aa14.03□□□□□ -0.16
BRCC3-201ENST00000330045 DPCDQ9BVM2 203 aaPredicted RBP14.03□□□□□ -0.16
BRCC3-201ENST00000330045 ZNF436Q9C0F3 470 aaPredicted RBP14.03□□□□□ -0.16
BRCC3-201ENST00000330045 LIN7BQ9HAP6 207 aa14.03□□□□□ -0.16
BRCC3-201ENST00000330045 KLHL9Q9P2J3 617 aa14.03□□□□□ -0.16
BRCC3-201ENST00000330045 EIF3KQ9UBQ5 218 aaKnown RBP14.03□□□□□ -0.16
BRCC3-201ENST00000330045 A0A0A6YYC8 382 aaPredicted RBP14.03□□□□□ -0.16
BRCC3-201ENST00000330045 I3L1I5 382 aaPredicted RBP14.03□□□□□ -0.16
BRCC3-201ENST00000330045 FOXS1O43638 330 aa14.03□□□□□ -0.16
BRCC3-201ENST00000330045 ITGA10O75578 1167 aa14.03□□□□□ -0.16
BRCC3-201ENST00000330045 ST6GAL1P15907 406 aa14.03□□□□□ -0.16
BRCC3-201ENST00000330045 AKT2P31751 481 aa14.03□□□□□ -0.16
BRCC3-201ENST00000330045 CLDN12P56749 244 aa14.03□□□□□ -0.16
BRCC3-201ENST00000330045 AP3S2P59780 193 aa14.03□□□□□ -0.16
BRCC3-201ENST00000330045 RPS4XP62701 263 aaKnown RBP14.03□□□□□ -0.16
BRCC3-201ENST00000330045 SIGIRRQ6IA17 410 aa14.03□□□□□ -0.16
BRCC3-201ENST00000330045 LEG1Q6P5S2 330 aa14.03□□□□□ -0.16
BRCC3-201ENST00000330045 GPBAR1Q8TDU6 330 aa14.03□□□□□ -0.16
BRCC3-201ENST00000330045 C3orf49Q96BT1 292 aa14.03□□□□□ -0.16
BRCC3-201ENST00000330045 ALG12Q9BV10 488 aa14.03□□□□□ -0.16
BRCC3-201ENST00000330045 CLEC4MQ9H2X3 399 aaPredicted RBP14.03□□□□□ -0.16
BRCC3-201ENST00000330045 TCEAL2Q9H3H9 227 aaPredicted RBP14.03□□□□□ -0.16
BRCC3-201ENST00000330045 HCN3Q9P1Z3 774 aa14.03□□□□□ -0.16
BRCC3-201ENST00000330045 OR10H1Q9Y4A9 318 aa14.03□□□□□ -0.16
BRCC3-201ENST00000330045 NPTNQ9Y639 398 aa14.03□□□□□ -0.16
BRCC3-201ENST00000330045 NAP1L6A6NFF2 107 aa14.02□□□□□ -0.16
BRCC3-201ENST00000330045 MBTPS2O43462 519 aa14.02□□□□□ -0.16
BRCC3-201ENST00000330045 PRAMEF2O60811 474 aa14.02□□□□□ -0.16
BRCC3-201ENST00000330045 PRAF2O60831 178 aa14.02□□□□□ -0.16
BRCC3-201ENST00000330045 TMEM127O75204 238 aa14.02□□□□□ -0.16
BRCC3-201ENST00000330045 KRT33AO76009 404 aa14.02□□□□□ -0.16
BRCC3-201ENST00000330045 TGM6O95932 706 aa14.02□□□□□ -0.16
BRCC3-201ENST00000330045 CT45A8P0DMV1 189 aa14.02□□□□□ -0.16
BRCC3-201ENST00000330045 CT45A9P0DMV2 189 aa14.02□□□□□ -0.16
BRCC3-201ENST00000330045 SSTR2P30874 369 aa14.02□□□□□ -0.16
BRCC3-201ENST00000330045 IKZF1Q13422 519 aa14.02□□□□□ -0.16
BRCC3-201ENST00000330045 SNTA1Q13424 505 aa14.02□□□□□ -0.16
BRCC3-201ENST00000330045 CT45A2Q5DJT8 189 aa14.02□□□□□ -0.16
BRCC3-201ENST00000330045 TMEM255AQ5JRV8 349 aa14.02□□□□□ -0.16
BRCC3-201ENST00000330045 LINC01590Q5TEZ4 76 aa14.02□□□□□ -0.16
BRCC3-201ENST00000330045 ARHGEF39Q8N4T4 335 aa14.02□□□□□ -0.16
BRCC3-201ENST00000330045 OR2T35Q8NGX2 323 aa14.02□□□□□ -0.16
BRCC3-201ENST00000330045 MOSPD2Q8NHP6 518 aa14.02□□□□□ -0.16
BRCC3-201ENST00000330045 FCAMRQ8WWV6 532 aa14.02□□□□□ -0.16
BRCC3-201ENST00000330045 RGP1Q92546 391 aaPredicted RBP14.02□□□□□ -0.16
BRCC3-201ENST00000330045 S100A16Q96FQ6 103 aaKnown RBP14.02□□□□□ -0.16
BRCC3-201ENST00000330045 OR10A4Q9H209 315 aa14.02□□□□□ -0.16
BRCC3-201ENST00000330045 NANSQ9NR45 359 aa14.02□□□□□ -0.16
BRCC3-201ENST00000330045 RXFP3Q9NSD7 469 aa14.02□□□□□ -0.16
BRCC3-201ENST00000330045 KLK11Q9UBX7 282 aa14.02□□□□□ -0.16
BRCC3-201ENST00000330045 TCRBV21S2A2A0A5A6 115 aa14.02□□□□□ -0.17
BRCC3-201ENST00000330045 PRR32B1ATL7 298 aa14.02□□□□□ -0.17
BRCC3-201ENST00000330045 BLOC1S5-TXNDC5H3BN57 136 aa14.02□□□□□ -0.17
BRCC3-201ENST00000330045 CTNSO60931 367 aa14.02□□□□□ -0.17
BRCC3-201ENST00000330045 RNH1P13489 461 aaKnown RBP14.02□□□□□ -0.17
BRCC3-201ENST00000330045 CDKN2AP42771 156 aaKnown RBP14.02□□□□□ -0.17
BRCC3-201ENST00000330045 VEGFCP49767 419 aa14.02□□□□□ -0.17
BRCC3-201ENST00000330045 SELENOPP49908 381 aa14.02□□□□□ -0.17
BRCC3-201ENST00000330045 PGDP52209 483 aa14.02□□□□□ -0.17
BRCC3-201ENST00000330045 ZNF684Q5T5D7 378 aa14.02□□□□□ -0.17
BRCC3-201ENST00000330045 EID2Q8N6I1 236 aa14.02□□□□□ -0.17
BRCC3-201ENST00000330045 BCORP1Q8N888 145 aa14.02□□□□□ -0.17
BRCC3-201ENST00000330045 ZNF511Q8NB15 262 aa14.02□□□□□ -0.17
BRCC3-201ENST00000330045 RNF166Q96A37 237 aaPredicted RBP14.02□□□□□ -0.17
BRCC3-201ENST00000330045 Q96M85 177 aa14.02□□□□□ -0.17
BRCC3-201ENST00000330045 GPX7Q96SL4 187 aaPredicted RBP14.02□□□□□ -0.17
BRCC3-201ENST00000330045 SLC19A3Q9BZV2 496 aa14.02□□□□□ -0.17
BRCC3-201ENST00000330045 METTL17Q9H7H0 456 aaPredicted RBP14.02□□□□□ -0.17
BRCC3-201ENST00000330045 DMDP11532 3685 aa14.02□□□□□ -0.17
BRCC3-201ENST00000330045 VPS13AQ96RL7 3174 aa14.02□□□□□ -0.17
BRCC3-201ENST00000330045 KIR2DS5A0A0G2JLQ3 304 aa14.01□□□□□ -0.17
BRCC3-201ENST00000330045 A0A0G2JNG1 304 aa14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms