RNA–Protein interactions for RNA: ENST00000329399.6

PDLIM1-201, Transcript of PDZ and LIM domain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM1, Length 1,452 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-201ENST00000329399 CBLN3Q6UW01 205 aa14.82□□□□□ -0.04
PDLIM1-201ENST00000329399 SATL1Q86VE3 508 aa14.82□□□□□ -0.04
PDLIM1-201ENST00000329399 DOLPP1Q86YN1 238 aa14.82□□□□□ -0.04
PDLIM1-201ENST00000329399 GHDCQ8N2G8 530 aa14.82□□□□□ -0.04
PDLIM1-201ENST00000329399 LNX2Q8N448 690 aa14.82□□□□□ -0.04
PDLIM1-201ENST00000329399 PFN4Q8NHR9 129 aa14.82□□□□□ -0.04
PDLIM1-201ENST00000329399 GPR119Q8TDV5 335 aa14.82□□□□□ -0.04
PDLIM1-201ENST00000329399 DTNBP1Q96EV8 351 aa14.82□□□□□ -0.04
PDLIM1-201ENST00000329399 SIGLEC11Q96RL6 698 aa14.82□□□□□ -0.04
PDLIM1-201ENST00000329399 RACGAP1Q9H0H5 632 aa14.82□□□□□ -0.04
PDLIM1-201ENST00000329399 OR52D1Q9H346 318 aa14.82□□□□□ -0.04
PDLIM1-201ENST00000329399 EGLN3Q9H6Z9 239 aa14.82□□□□□ -0.04
PDLIM1-201ENST00000329399 ZFP64Q9NPA5 681 aa14.82□□□□□ -0.04
PDLIM1-201ENST00000329399 MRPS18AQ9NVS2 196 aaKnown RBP14.82□□□□□ -0.04
PDLIM1-201ENST00000329399 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP14.82□□□□□ -0.04
PDLIM1-201ENST00000329399 PCNX3Q9H6A9 2034 aa14.81□□□□□ -0.04
PDLIM1-201ENST00000329399 CYSRT1A8MQ03 144 aa14.81□□□□□ -0.04
PDLIM1-201ENST00000329399 ETV2O00321 342 aaPredicted RBP14.81□□□□□ -0.04
PDLIM1-201ENST00000329399 CDC42EP2O14613 210 aa14.81□□□□□ -0.04
PDLIM1-201ENST00000329399 PIP5K1CO60331 668 aa14.81□□□□□ -0.04
PDLIM1-201ENST00000329399 ZG16O60844 167 aa14.81□□□□□ -0.04
PDLIM1-201ENST00000329399 OR7A10O76100 309 aa14.81□□□□□ -0.04
PDLIM1-201ENST00000329399 CDK1P06493 297 aa14.81□□□□□ -0.04
PDLIM1-201ENST00000329399 APOBEC1P41238 236 aaKnown RBP14.81□□□□□ -0.04
PDLIM1-201ENST00000329399 CA7P43166 264 aa14.81□□□□□ -0.04
PDLIM1-201ENST00000329399 SLC15A1P46059 708 aa14.81□□□□□ -0.04
PDLIM1-201ENST00000329399 LSM11P83369 360 aaKnown RBP eCLIP14.81□□□□□ -0.047e-14■■■■■ 59.8
PDLIM1-201ENST00000329399 CRYZQ08257 329 aaKnown RBP14.81□□□□□ -0.04
PDLIM1-201ENST00000329399 ARMC4Q5T2S8 1044 aa14.81□□□□□ -0.04
PDLIM1-201ENST00000329399 ACSM5Q6NUN0 579 aa14.81□□□□□ -0.04
PDLIM1-201ENST00000329399 STX19Q8N4C7 294 aa14.81□□□□□ -0.04
PDLIM1-201ENST00000329399 TCEANCQ8N8B7 351 aa14.81□□□□□ -0.04
PDLIM1-201ENST00000329399 GATSQ8NAP1 163 aa14.81□□□□□ -0.04
PDLIM1-201ENST00000329399 STK35Q8TDR2 534 aa14.81□□□□□ -0.04
PDLIM1-201ENST00000329399 DUSP19Q8WTR2 217 aa14.81□□□□□ -0.04
PDLIM1-201ENST00000329399 SSC4DQ8WTU2 575 aa14.81□□□□□ -0.04
PDLIM1-201ENST00000329399 UBE2FQ969M7 185 aa14.81□□□□□ -0.04
PDLIM1-201ENST00000329399 RELTQ969Z4 430 aa14.81□□□□□ -0.04
PDLIM1-201ENST00000329399 CDCA4Q9BXL8 241 aa14.81□□□□□ -0.04
PDLIM1-201ENST00000329399 UBQLN3Q9H347 655 aa14.81□□□□□ -0.04
PDLIM1-201ENST00000329399 TAS2R10Q9NYW0 307 aa14.81□□□□□ -0.04
PDLIM1-201ENST00000329399 ENO4A6NNW6 628 aa14.8□□□□□ -0.04
PDLIM1-201ENST00000329399 GNB5O14775 395 aa14.8□□□□□ -0.04
PDLIM1-201ENST00000329399 SURF4O15260 269 aa14.8□□□□□ -0.04
PDLIM1-201ENST00000329399 PRODHO43272 600 aa14.8□□□□□ -0.04
PDLIM1-201ENST00000329399 TLX2O43763 284 aaPredicted RBP14.8□□□□□ -0.04
PDLIM1-201ENST00000329399 NDUFB2O95178 105 aa14.8□□□□□ -0.04
PDLIM1-201ENST00000329399 NUDT14O95848 222 aa14.8□□□□□ -0.04
PDLIM1-201ENST00000329399 MT-ATP6P00846 226 aa14.8□□□□□ -0.04
PDLIM1-201ENST00000329399 GAS1P54826 345 aa14.8□□□□□ -0.04
PDLIM1-201ENST00000329399 MFSD13AQ14CX5 517 aa14.8□□□□□ -0.04
PDLIM1-201ENST00000329399 TBCEQ15813 527 aaPredicted RBP14.8□□□□□ -0.04
PDLIM1-201ENST00000329399 NDUFAF6Q330K2 333 aa14.8□□□□□ -0.04
PDLIM1-201ENST00000329399 SLC22A16Q86VW1 577 aa14.8□□□□□ -0.04
PDLIM1-201ENST00000329399 GID4Q8IVV7 300 aa14.8□□□□□ -0.04
PDLIM1-201ENST00000329399 OR8D4Q8NGM9 314 aa14.8□□□□□ -0.04
PDLIM1-201ENST00000329399 RORBQ92753 470 aa14.8□□□□□ -0.04
PDLIM1-201ENST00000329399 GGHQ92820 318 aa14.8□□□□□ -0.04
PDLIM1-201ENST00000329399 BCL7BQ9BQE9 202 aa14.8□□□□□ -0.04
PDLIM1-201ENST00000329399 PLA2G12AQ9BZM1 189 aa14.8□□□□□ -0.04
PDLIM1-201ENST00000329399 CCDC90BQ9GZT6 254 aa14.8□□□□□ -0.04
PDLIM1-201ENST00000329399 DSN1Q9H410 356 aa14.8□□□□□ -0.04
PDLIM1-201ENST00000329399 ZNF703Q9H7S9 590 aaPredicted RBP14.8□□□□□ -0.04
PDLIM1-201ENST00000329399 METTL7AQ9H8H3 244 aa14.8□□□□□ -0.04
PDLIM1-201ENST00000329399 C20orf141Q9NUB4 165 aa14.8□□□□□ -0.04
PDLIM1-201ENST00000329399 KLRF1Q9NZS2 232 aa14.8□□□□□ -0.04
PDLIM1-201ENST00000329399 SLC6A5Q9Y345 797 aa14.8□□□□□ -0.04
PDLIM1-201ENST00000329399 UNC79Q9P2D8 2635 aa14.8□□□□□ -0.04
PDLIM1-201ENST00000329399 A1L4Q6 167 aa14.79□□□□□ -0.04
PDLIM1-201ENST00000329399 FAM47E-STBD1D6RA91 191 aa14.79□□□□□ -0.04
PDLIM1-201ENST00000329399 CCL21O00585 134 aa14.79□□□□□ -0.04
PDLIM1-201ENST00000329399 OIP5O43482 229 aa14.79□□□□□ -0.04
PDLIM1-201ENST00000329399 SCO2O43819 266 aa14.79□□□□□ -0.04
PDLIM1-201ENST00000329399 OR2T1O43869 369 aa14.79□□□□□ -0.04
PDLIM1-201ENST00000329399 SEC14L2O76054 403 aa14.79□□□□□ -0.04
PDLIM1-201ENST00000329399 CLDN1O95832 211 aa14.79□□□□□ -0.04
PDLIM1-201ENST00000329399 IFNGP01579 166 aa14.79□□□□□ -0.04
PDLIM1-201ENST00000329399 IGHG3P01860 377 aa14.79□□□□□ -0.04
PDLIM1-201ENST00000329399 HTR1AP08908 422 aa14.79□□□□□ -0.04
PDLIM1-201ENST00000329399 PEPDP12955 493 aa14.79□□□□□ -0.04
PDLIM1-201ENST00000329399 APEHP13798 732 aaKnown RBP14.79□□□□□ -0.04
PDLIM1-201ENST00000329399 FUT1P19526 365 aa14.79□□□□□ -0.04
PDLIM1-201ENST00000329399 PCMT1P22061 227 aa14.79□□□□□ -0.04
PDLIM1-201ENST00000329399 TACR3P29371 465 aa14.79□□□□□ -0.04
PDLIM1-201ENST00000329399 RNF144AP50876 292 aaPredicted RBP14.79□□□□□ -0.04
PDLIM1-201ENST00000329399 EMX1Q04741 257 aaPredicted RBP14.79□□□□□ -0.04
PDLIM1-201ENST00000329399 RAB40BQ12829 278 aa14.79□□□□□ -0.04
PDLIM1-201ENST00000329399 CDSNQ15517 529 aa14.79□□□□□ -0.04
PDLIM1-201ENST00000329399 SMN1Q16637 294 aaKnown RBP14.79□□□□□ -0.04
PDLIM1-201ENST00000329399 SLC25A53Q5H9E4 307 aa14.79□□□□□ -0.04
PDLIM1-201ENST00000329399 NXNL2Q5VZ03 156 aa14.79□□□□□ -0.04
PDLIM1-201ENST00000329399 XAF1Q6GPH4 301 aa14.79□□□□□ -0.04
PDLIM1-201ENST00000329399 OR5M10Q6IEU7 315 aa14.79□□□□□ -0.04
PDLIM1-201ENST00000329399 ARHGAP11AQ6P4F7 1023 aa14.79□□□□□ -0.04
PDLIM1-201ENST00000329399 DPY19L2P2Q6ZN68 376 aa14.79□□□□□ -0.04
PDLIM1-201ENST00000329399 TRILQ7L0X0 811 aa14.79□□□□□ -0.04
PDLIM1-201ENST00000329399 FAM109AQ8N4B1 249 aa14.79□□□□□ -0.04
PDLIM1-201ENST00000329399 RPRMLQ8N4K4 120 aa14.79□□□□□ -0.04
PDLIM1-201ENST00000329399 WDSUB1Q8N9V3 476 aa14.79□□□□□ -0.04
PDLIM1-201ENST00000329399 MUL1Q969V5 352 aa14.79□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms