RNA–Protein interactions for RNA: ENST00000328839.3

PPP4R4-202, Transcript of protein phosphatase 4 regulatory subunit 4, humanhuman

TSL 1 (best) BASIC

Gene PPP4R4, Length 876 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R4-202ENST00000328839 PRR14Q9BWN1 585 aa21.78■■□□□ 1.08
PPP4R4-202ENST00000328839 PARD6BQ9BYG5 372 aa21.78■■□□□ 1.08
PPP4R4-202ENST00000328839 SEC61A2Q9H9S3 476 aa21.78■■□□□ 1.08
PPP4R4-202ENST00000328839 MYOZ1Q9NP98 299 aaPredicted RBP21.78■■□□□ 1.08
PPP4R4-202ENST00000328839 ARPC4-TTLL3A0A0A6YYG9 625 aa21.77■■□□□ 1.08
PPP4R4-202ENST00000328839 IGHV4-61A0A0C4DH41 118 aa21.77■■□□□ 1.08
PPP4R4-202ENST00000328839 A0A0G2JPF8 293 aa21.77■■□□□ 1.08
PPP4R4-202ENST00000328839 HNRNPCL2B2RXH8 293 aa21.77■■□□□ 1.08
PPP4R4-202ENST00000328839 HNRNPCL3B7ZW38 293 aa21.77■■□□□ 1.08
PPP4R4-202ENST00000328839 HNRNPCL1O60812 293 aaKnown RBP21.77■■□□□ 1.08
PPP4R4-202ENST00000328839 NPIPB7O75200 414 aa21.77■■□□□ 1.08
PPP4R4-202ENST00000328839 ZCCHC18P0CG32 403 aa21.77■■□□□ 1.08
PPP4R4-202ENST00000328839 HNRNPCL4P0DMR1 293 aa21.77■■□□□ 1.08
PPP4R4-202ENST00000328839 ZNF43P17038 809 aa21.77■■□□□ 1.08
PPP4R4-202ENST00000328839 TNFAIP8L3Q5GJ75 292 aa21.77■■□□□ 1.08
PPP4R4-202ENST00000328839 FAM120AOSQ5T036 256 aa21.77■■□□□ 1.08
PPP4R4-202ENST00000328839 MFSD8Q8NHS3 518 aa21.77■■□□□ 1.08
PPP4R4-202ENST00000328839 LINC00470Q9BZP3 86 aa21.77■■□□□ 1.08
PPP4R4-202ENST00000328839 THUMPD1Q9NXG2 353 aaKnown RBP21.77■■□□□ 1.08
PPP4R4-202ENST00000328839 IFT52Q9Y366 437 aa21.77■■□□□ 1.08
PPP4R4-202ENST00000328839 CHST2Q9Y4C5 530 aa21.77■■□□□ 1.08
PPP4R4-202ENST00000328839 PDE5AO76074 875 aa21.76■■□□□ 1.07
PPP4R4-202ENST00000328839 CALCRP30988 508 aa21.76■■□□□ 1.07
PPP4R4-202ENST00000328839 SH3BGRP55822 239 aaPredicted RBP21.76■■□□□ 1.07
PPP4R4-202ENST00000328839 SRSF2Q01130 221 aaKnown RBP21.76■■□□□ 1.07
PPP4R4-202ENST00000328839 IL1RL1Q01638 556 aa21.76■■□□□ 1.07
PPP4R4-202ENST00000328839 MAGEE2Q8TD90 523 aaPredicted RBP21.76■■□□□ 1.07
PPP4R4-202ENST00000328839 VPS33AQ96AX1 596 aa21.76■■□□□ 1.07
PPP4R4-202ENST00000328839 ZNF317Q96PQ6 595 aaPredicted RBP21.76■■□□□ 1.07
PPP4R4-202ENST00000328839 NELFAQ9H3P2 528 aa21.76■■□□□ 1.07
PPP4R4-202ENST00000328839 CRNNQ9UBG3 495 aaPredicted RBP21.76■■□□□ 1.07
PPP4R4-202ENST00000328839 RPS6KB2Q9UBS0 482 aa21.76■■□□□ 1.07
PPP4R4-202ENST00000328839 SLCO1B7G3V0H7 640 aa21.75■■□□□ 1.07
PPP4R4-202ENST00000328839 SNNO75324 88 aaPredicted RBP21.75■■□□□ 1.07
PPP4R4-202ENST00000328839 CELA3BP08861 270 aa21.75■■□□□ 1.07
PPP4R4-202ENST00000328839 HNF1AP20823 631 aa21.75■■□□□ 1.07
PPP4R4-202ENST00000328839 WDR4P57081 412 aaKnown RBP21.75■■□□□ 1.07
PPP4R4-202ENST00000328839 ARF1P84077 181 aaKnown RBP21.75■■□□□ 1.07
PPP4R4-202ENST00000328839 SLC9B1Q4ZJI4 515 aa21.75■■□□□ 1.07
PPP4R4-202ENST00000328839 GPR137CQ8N3F9 429 aa21.75■■□□□ 1.07
PPP4R4-202ENST00000328839 OR4F15Q8NGB8 312 aa21.75■■□□□ 1.07
PPP4R4-202ENST00000328839 OR9I1Q8NGQ6 314 aa21.75■■□□□ 1.07
PPP4R4-202ENST00000328839 KTI12Q96EK9 354 aaPredicted RBP21.75■■□□□ 1.07
PPP4R4-202ENST00000328839 PTDSS2Q9BVG9 487 aa21.75■■□□□ 1.07
PPP4R4-202ENST00000328839 BPESC1Q9GZL8 116 aa21.75■■□□□ 1.07
PPP4R4-202ENST00000328839 RAB1BQ9H0U4 201 aa21.75■■□□□ 1.07
PPP4R4-202ENST00000328839 PLK3Q9H4B4 646 aa21.75■■□□□ 1.07
PPP4R4-202ENST00000328839 MOV10Q9HCE1 1003 aaKnown RBP21.75■■□□□ 1.07
PPP4R4-202ENST00000328839 ZIM2Q9NZV7 527 aa21.75■■□□□ 1.07
PPP4R4-202ENST00000328839 SEC14L4Q9UDX3 406 aa21.75■■□□□ 1.07
PPP4R4-202ENST00000328839 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP21.75■■□□□ 1.071e-6■□□□□ 9.8
PPP4R4-202ENST00000328839 TMEM120BA0PK00 339 aa21.74■■□□□ 1.07
PPP4R4-202ENST00000328839 FTCDNL1E5RQL4 147 aa21.74■■□□□ 1.07
PPP4R4-202ENST00000328839 SLC43A1O75387 559 aa21.74■■□□□ 1.07
PPP4R4-202ENST00000328839 TGFAP01135 160 aa21.74■■□□□ 1.07
PPP4R4-202ENST00000328839 NUDT7P0C024 238 aa21.74■■□□□ 1.07
PPP4R4-202ENST00000328839 PPOXP50336 477 aa21.74■■□□□ 1.07
PPP4R4-202ENST00000328839 IDH3GP51553 393 aaPredicted RBP21.74■■□□□ 1.07
PPP4R4-202ENST00000328839 POLR2JP52435 117 aaKnown RBP21.74■■□□□ 1.07
PPP4R4-202ENST00000328839 EGR4Q05215 589 aa21.74■■□□□ 1.07
PPP4R4-202ENST00000328839 NPRL3Q12980 569 aa21.74■■□□□ 1.07
PPP4R4-202ENST00000328839 C1DQ13901 141 aaKnown RBP21.74■■□□□ 1.07
PPP4R4-202ENST00000328839 EFNB3Q15768 340 aa21.74■■□□□ 1.07
PPP4R4-202ENST00000328839 C3orf36Q3SXR2 165 aa21.74■■□□□ 1.07
PPP4R4-202ENST00000328839 MAL2Q969L2 176 aa21.74■■□□□ 1.07
PPP4R4-202ENST00000328839 RCE1Q9Y256 329 aa21.74■■□□□ 1.07
PPP4R4-202ENST00000328839 C5orf58C9J3I9 102 aa21.73■■□□□ 1.07
PPP4R4-202ENST00000328839 hCG_2039718K7EN88 272 aa21.73■■□□□ 1.07
PPP4R4-202ENST00000328839 UBDO15205 165 aa21.73■■□□□ 1.07
PPP4R4-202ENST00000328839 IGLV1-44P01699 117 aa21.73■■□□□ 1.07
PPP4R4-202ENST00000328839 ERCC1P07992 297 aaPredicted RBP21.73■■□□□ 1.07
PPP4R4-202ENST00000328839 CAPZA2P47755 286 aa21.73■■□□□ 1.07
PPP4R4-202ENST00000328839 MSANTD1Q6ZTZ1 278 aa21.73■■□□□ 1.07
PPP4R4-202ENST00000328839 CROCCP2Q86T23 111 aa21.73■■□□□ 1.07
PPP4R4-202ENST00000328839 MYPOPQ86VE0 399 aaPredicted RBP21.73■■□□□ 1.07
PPP4R4-202ENST00000328839 ZNF540Q8NDQ6 660 aa21.73■■□□□ 1.07
PPP4R4-202ENST00000328839 MAELQ96JY0 434 aaKnown RBP21.73■■□□□ 1.07
PPP4R4-202ENST00000328839 OXGR1Q96P68 337 aa21.73■■□□□ 1.07
PPP4R4-202ENST00000328839 GPR35Q9HC97 309 aa21.73■■□□□ 1.07
PPP4R4-202ENST00000328839 SDR39U1Q9NRG7 319 aaPredicted RBP21.73■■□□□ 1.07
PPP4R4-202ENST00000328839 SVEP1Q4LDE5 3571 aa21.73■■□□□ 1.07
PPP4R4-202ENST00000328839 VSTM5A8MXK1 200 aa21.72■■□□□ 1.07
PPP4R4-202ENST00000328839 IGKV3-15P01624 115 aa21.72■■□□□ 1.07
PPP4R4-202ENST00000328839 HOXB1P14653 301 aaPredicted RBP21.72■■□□□ 1.07
PPP4R4-202ENST00000328839 ZNF23P17027 643 aa21.72■■□□□ 1.07
PPP4R4-202ENST00000328839 THBS4P35443 961 aa21.72■■□□□ 1.07
PPP4R4-202ENST00000328839 HGFACQ04756 655 aa21.72■■□□□ 1.07
PPP4R4-202ENST00000328839 RGNQ15493 299 aa21.72■■□□□ 1.07
PPP4R4-202ENST00000328839 CEACAM16Q2WEN9 425 aa21.72■■□□□ 1.07
PPP4R4-202ENST00000328839 SPATA21Q7Z572 469 aa21.72■■□□□ 1.07
PPP4R4-202ENST00000328839 SVOPLQ8N434 492 aa21.72■■□□□ 1.07
PPP4R4-202ENST00000328839 NUP37Q8NFH4 326 aa21.72■■□□□ 1.07
PPP4R4-202ENST00000328839 BBS10Q8TAM1 723 aa21.72■■□□□ 1.07
PPP4R4-202ENST00000328839 C19orf24Q9BVV8 132 aa21.72■■□□□ 1.07
PPP4R4-202ENST00000328839 RAD21L1Q9H4I0 556 aa21.72■■□□□ 1.07
PPP4R4-202ENST00000328839 PCDHB14Q9Y5E9 798 aa21.72■■□□□ 1.07
PPP4R4-202ENST00000328839 SH3PXD2BA1X283 911 aa21.71■■□□□ 1.07
PPP4R4-202ENST00000328839 LRP5LA4QPB2 252 aa21.71■■□□□ 1.07
PPP4R4-202ENST00000328839 M0R082 166 aa21.71■■□□□ 1.07
PPP4R4-202ENST00000328839 AIM2O14862 343 aa21.71■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms