RNA–Protein interactions for RNA: ENST00000325110.10

HMGCS1-201, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGCS1, Length 3,506 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-201ENST00000325110 CAMK2AQ9UQM7 478 aa11.82□□□□□ -0.52
HMGCS1-201ENST00000325110 SZT2Q5T011 3432 aa11.82□□□□□ -0.52
HMGCS1-201ENST00000325110 A0A0G2JK05 382 aa11.81□□□□□ -0.52
HMGCS1-201ENST00000325110 UBE2QL1A1L167 161 aa11.81□□□□□ -0.52
HMGCS1-201ENST00000325110 ZFPL1O95159 310 aa11.81□□□□□ -0.52
HMGCS1-201ENST00000325110 FCARP24071 287 aa11.81□□□□□ -0.52
HMGCS1-201ENST00000325110 BTCP35070 178 aa11.81□□□□□ -0.52
HMGCS1-201ENST00000325110 PSG6Q00889 435 aa11.81□□□□□ -0.52
HMGCS1-201ENST00000325110 GRK1Q15835 563 aa11.81□□□□□ -0.52
HMGCS1-201ENST00000325110 CD276Q5ZPR3 534 aa11.81□□□□□ -0.52
HMGCS1-201ENST00000325110 TMED4Q7Z7H5 227 aa11.81□□□□□ -0.52
HMGCS1-201ENST00000325110 OR52B4Q8NGK2 314 aa11.81□□□□□ -0.52
HMGCS1-201ENST00000325110 SCMH1Q96GD3 660 aa11.81□□□□□ -0.52
HMGCS1-201ENST00000325110 BMFQ96LC9 184 aa11.81□□□□□ -0.52
HMGCS1-201ENST00000325110 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP11.81□□□□□ -0.521e-46■■□□□ 11.5
HMGCS1-201ENST00000325110 EMC7Q9NPA0 242 aa11.81□□□□□ -0.52
HMGCS1-201ENST00000325110 ZC4H2Q9NQZ6 224 aa11.81□□□□□ -0.52
HMGCS1-201ENST00000325110 DNAJB12Q9NXW2 375 aaKnown RBP11.81□□□□□ -0.52
HMGCS1-201ENST00000325110 COPZ2Q9P299 210 aa11.81□□□□□ -0.52
HMGCS1-201ENST00000325110 GRHPRQ9UBQ7 328 aa11.81□□□□□ -0.52
HMGCS1-201ENST00000325110 A0A0J9YY10 115 aa11.81□□□□□ -0.52
HMGCS1-201ENST00000325110 RGS11O94810 467 aa11.81□□□□□ -0.52
HMGCS1-201ENST00000325110 APBB3O95704 486 aa11.81□□□□□ -0.52
HMGCS1-201ENST00000325110 IGKV1D-16P01601 117 aa11.81□□□□□ -0.52
HMGCS1-201ENST00000325110 ZNF250P15622 560 aa11.81□□□□□ -0.52
HMGCS1-201ENST00000325110 GSG1Q2KHT4 349 aa11.81□□□□□ -0.52
HMGCS1-201ENST00000325110 TCTE1Q5JU00 501 aa11.81□□□□□ -0.52
HMGCS1-201ENST00000325110 WDR45BQ5MNZ6 344 aa11.81□□□□□ -0.52
HMGCS1-201ENST00000325110 LIPNQ5VXI9 398 aa11.81□□□□□ -0.52
HMGCS1-201ENST00000325110 Q6ZTK2 550 aa11.81□□□□□ -0.52
HMGCS1-201ENST00000325110 OR5AK2Q8NH90 309 aa11.81□□□□□ -0.52
HMGCS1-201ENST00000325110 NT5CQ8TCD5 201 aa11.81□□□□□ -0.52
HMGCS1-201ENST00000325110 PMEPA1Q969W9 287 aa11.81□□□□□ -0.52
HMGCS1-201ENST00000325110 STACQ99469 402 aa11.81□□□□□ -0.52
HMGCS1-201ENST00000325110 GDF15Q99988 308 aa11.81□□□□□ -0.52
HMGCS1-201ENST00000325110 PBX4Q9BYU1 374 aa11.81□□□□□ -0.52
HMGCS1-201ENST00000325110 NRSN2Q9GZP1 204 aa11.81□□□□□ -0.52
HMGCS1-201ENST00000325110 K7EQS6 105 aa11.81□□□□□ -0.52
HMGCS1-201ENST00000325110 TNFP01375 233 aa11.81□□□□□ -0.52
HMGCS1-201ENST00000325110 RNH1P13489 461 aaKnown RBP11.81□□□□□ -0.52
HMGCS1-201ENST00000325110 GRM7Q14831 915 aa11.81□□□□□ -0.52
HMGCS1-201ENST00000325110 ZMYND11Q15326 602 aa11.81□□□□□ -0.52
HMGCS1-201ENST00000325110 PCGF3Q3KNV8 242 aa11.81□□□□□ -0.52
HMGCS1-201ENST00000325110 ALG10Q5BKT4 473 aa11.81□□□□□ -0.52
HMGCS1-201ENST00000325110 BTN2A1Q7KYR7 527 aa11.81□□□□□ -0.52
HMGCS1-201ENST00000325110 OR51Q1Q8NH59 317 aa11.81□□□□□ -0.52
HMGCS1-201ENST00000325110 HRASLSQ9HDD0 168 aa11.81□□□□□ -0.52
HMGCS1-201ENST00000325110 ST6GALNAC2Q9UJ37 374 aa11.81□□□□□ -0.52
HMGCS1-201ENST00000325110 ZNF281Q9Y2X9 895 aa11.81□□□□□ -0.52
HMGCS1-201ENST00000325110 MAB21L2Q9Y586 359 aa11.81□□□□□ -0.52
HMGCS1-201ENST00000325110 LEUTXA8MZ59 168 aa11.8□□□□□ -0.52
HMGCS1-201ENST00000325110 ATF4P18848 351 aaPredicted RBP11.8□□□□□ -0.52
HMGCS1-201ENST00000325110 CCKBRP32239 447 aa11.8□□□□□ -0.52
HMGCS1-201ENST00000325110 CCR9P51686 369 aa11.8□□□□□ -0.52
HMGCS1-201ENST00000325110 ART1P52961 327 aa11.8□□□□□ -0.52
HMGCS1-201ENST00000325110 C4orf46Q504U0 113 aa11.8□□□□□ -0.52
HMGCS1-201ENST00000325110 UBE2NLQ5JXB2 153 aa11.8□□□□□ -0.52
HMGCS1-201ENST00000325110 ZDHHC1Q8WTX9 485 aa11.8□□□□□ -0.52
HMGCS1-201ENST00000325110 NARFLQ9H6Q4 476 aa11.8□□□□□ -0.52
HMGCS1-201ENST00000325110 ZFP64Q9NPA5 681 aa11.8□□□□□ -0.52
HMGCS1-201ENST00000325110 FBXL21Q9UKT6 434 aa11.8□□□□□ -0.52
HMGCS1-201ENST00000325110 CYP8B1Q9UNU6 501 aa11.8□□□□□ -0.52
HMGCS1-201ENST00000325110 A0A1B0GVI7 797 aa11.8□□□□□ -0.52
HMGCS1-201ENST00000325110 IFITM5A6NNB3 132 aa11.8□□□□□ -0.52
HMGCS1-201ENST00000325110 NUPL2O15504 423 aaKnown RBP11.8□□□□□ -0.52
HMGCS1-201ENST00000325110 HCRTR2O43614 444 aa11.8□□□□□ -0.52
HMGCS1-201ENST00000325110 PDGFAP04085 211 aa11.8□□□□□ -0.52
HMGCS1-201ENST00000325110 CDK2P24941 298 aa11.8□□□□□ -0.52
HMGCS1-201ENST00000325110 MMP15P51511 669 aa11.8□□□□□ -0.52
HMGCS1-201ENST00000325110 ALKAL2Q6UX46 152 aa11.8□□□□□ -0.52
HMGCS1-201ENST00000325110 LRRC69Q6ZNQ3 347 aa11.8□□□□□ -0.52
HMGCS1-201ENST00000325110 POMGNT2Q8NAT1 580 aa11.8□□□□□ -0.52
HMGCS1-201ENST00000325110 BAHD1Q8TBE0 780 aaPredicted RBP11.8□□□□□ -0.52
HMGCS1-201ENST00000325110 SMIM4Q8WVI0 70 aa11.8□□□□□ -0.52
HMGCS1-201ENST00000325110 RLN3Q8WXF3 142 aa11.8□□□□□ -0.52
HMGCS1-201ENST00000325110 TMEM106AQ96A25 262 aa11.8□□□□□ -0.52
HMGCS1-201ENST00000325110 UBL7Q96S82 380 aaPredicted RBP11.8□□□□□ -0.52
HMGCS1-201ENST00000325110 ADOQ96SZ5 270 aa11.8□□□□□ -0.52
HMGCS1-201ENST00000325110 COMMD4Q9H0A8 199 aa11.8□□□□□ -0.52
HMGCS1-201ENST00000325110 PILRAQ9UKJ1 303 aa11.8□□□□□ -0.52
HMGCS1-201ENST00000325110 PRUNE2Q8WUY3 3088 aa11.8□□□□□ -0.52
HMGCS1-201ENST00000325110 MPDZO75970 2070 aa11.8□□□□□ -0.52
HMGCS1-201ENST00000325110 CYR61O00622 381 aa11.8□□□□□ -0.52
HMGCS1-201ENST00000325110 XKRYO14609 159 aa11.8□□□□□ -0.52
HMGCS1-201ENST00000325110 CREBL2O60519 120 aaPredicted RBP11.8□□□□□ -0.52
HMGCS1-201ENST00000325110 TACSTD2P09758 323 aa11.8□□□□□ -0.52
HMGCS1-201ENST00000325110 MAZP56270 477 aaKnown RBP11.8□□□□□ -0.52
HMGCS1-201ENST00000325110 CEBPEQ15744 281 aa11.8□□□□□ -0.52
HMGCS1-201ENST00000325110 C9orf50Q5SZB4 431 aa11.8□□□□□ -0.52
HMGCS1-201ENST00000325110 DVL3Q92997 716 aaPredicted RBP11.8□□□□□ -0.52
HMGCS1-201ENST00000325110 ZNF436Q9C0F3 470 aaPredicted RBP11.8□□□□□ -0.52
HMGCS1-201ENST00000325110 SYT4Q9H2B2 425 aa11.8□□□□□ -0.52
HMGCS1-201ENST00000325110 TTYH1Q9H313 450 aaPredicted RBP11.8□□□□□ -0.52
HMGCS1-201ENST00000325110 KCNK15Q9H427 330 aa11.8□□□□□ -0.52
HMGCS1-201ENST00000325110 ZMAT3Q9HA38 289 aaKnown RBP11.8□□□□□ -0.52
HMGCS1-201ENST00000325110 GPN1Q9HCN4 374 aaPredicted RBP11.8□□□□□ -0.52
HMGCS1-201ENST00000325110 LYRM4Q9HD34 91 aa11.8□□□□□ -0.52
HMGCS1-201ENST00000325110 C2orf42Q9NWW7 574 aa11.8□□□□□ -0.52
HMGCS1-201ENST00000325110 B3GNT2Q9NY97 397 aa11.8□□□□□ -0.52
HMGCS1-201ENST00000325110 ASXL3Q9C0F0 2248 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms