RNA–Protein interactions for RNA: ENST00000320876.10

SMCHD1-201, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMCHD1, Length 8,821 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-201ENST00000320876 FAM57BQ71RH2 274 aa15.72■□□□□ 0.11
SMCHD1-201ENST00000320876 MEX3DQ86XN8 651 aaKnown RBP15.72■□□□□ 0.11
SMCHD1-201ENST00000320876 WDTC1Q8N5D0 677 aa15.72■□□□□ 0.11
SMCHD1-201ENST00000320876 INTS12Q96CB8 462 aaKnown RBP15.72■□□□□ 0.11
SMCHD1-201ENST00000320876 RTP3Q9BQQ7 232 aa15.72■□□□□ 0.11
SMCHD1-201ENST00000320876 SCML1Q9UN30 329 aa15.72■□□□□ 0.11
SMCHD1-201ENST00000320876 AQP9O43315 295 aa15.72■□□□□ 0.11
SMCHD1-201ENST00000320876 FOLR3P41439 243 aa15.72■□□□□ 0.11
SMCHD1-201ENST00000320876 CLINT1Q14677 625 aa15.72■□□□□ 0.11
SMCHD1-201ENST00000320876 PRELID3BQ9Y3B1 194 aa15.72■□□□□ 0.11
SMCHD1-201ENST00000320876 MTCP1P56278 107 aa15.72■□□□□ 0.11
SMCHD1-201ENST00000320876 ZNF280AP59817 542 aaPredicted RBP15.72■□□□□ 0.11
SMCHD1-201ENST00000320876 CBLL1Q75N03 491 aa15.72■□□□□ 0.11
SMCHD1-201ENST00000320876 OBP2BQ9NPH6 170 aa15.72■□□□□ 0.11
SMCHD1-201ENST00000320876 CBLCQ9ULV8 474 aa15.72■□□□□ 0.11
SMCHD1-201ENST00000320876 GAB2Q9UQC2 676 aa15.72■□□□□ 0.11
SMCHD1-201ENST00000320876 CICQ96RK0 1608 aaPredicted RBP15.72■□□□□ 0.11
SMCHD1-201ENST00000320876 LOC100289279A0A1B0GTE1 492 aa15.72■□□□□ 0.11
SMCHD1-201ENST00000320876 TRAF3IP2O43734 574 aaPredicted RBP15.72■□□□□ 0.11
SMCHD1-201ENST00000320876 SIX6O95475 246 aa15.72■□□□□ 0.11
SMCHD1-201ENST00000320876 SPI1P17947 270 aa15.72■□□□□ 0.11
SMCHD1-201ENST00000320876 TACR3P29371 465 aa15.72■□□□□ 0.11
SMCHD1-201ENST00000320876 FAM74A1Q5RGS3 127 aa15.72■□□□□ 0.11
SMCHD1-201ENST00000320876 MYO7AQ13402 2215 aa15.72■□□□□ 0.11
SMCHD1-201ENST00000320876 DDOSTP39656 456 aa15.72■□□□□ 0.11
SMCHD1-201ENST00000320876 AMDHD1Q96NU7 426 aa15.72■□□□□ 0.11
SMCHD1-201ENST00000320876 OR51B6Q9H340 312 aa15.72■□□□□ 0.11
SMCHD1-201ENST00000320876 CAMK2AQ9UQM7 478 aa15.72■□□□□ 0.11
SMCHD1-201ENST00000320876 SVILO95425 2214 aa15.72■□□□□ 0.11
SMCHD1-201ENST00000320876 FAM183AA6NL82 134 aa15.72■□□□□ 0.11
SMCHD1-201ENST00000320876 TO15178 435 aa15.72■□□□□ 0.11
SMCHD1-201ENST00000320876 SLC16A7O60669 478 aa15.72■□□□□ 0.11
SMCHD1-201ENST00000320876 SNCAP37840 140 aa15.72■□□□□ 0.11
SMCHD1-201ENST00000320876 RPL13AP40429 203 aaKnown RBP15.72■□□□□ 0.11
SMCHD1-201ENST00000320876 RPS25P62851 125 aaKnown RBP15.72■□□□□ 0.11
SMCHD1-201ENST00000320876 TMUB2Q71RG4 321 aa15.72■□□□□ 0.11
SMCHD1-201ENST00000320876 ADGRE4PQ86SQ3 457 aa15.72■□□□□ 0.11
SMCHD1-201ENST00000320876 FIBINQ8TAL6 211 aa15.72■□□□□ 0.11
SMCHD1-201ENST00000320876 FRS3O43559 492 aa15.72■□□□□ 0.11
SMCHD1-201ENST00000320876 POU3F2P20265 443 aaPredicted RBP15.72■□□□□ 0.11
SMCHD1-201ENST00000320876 HCCSP53701 268 aa15.72■□□□□ 0.11
SMCHD1-201ENST00000320876 GPRIN1Q7Z2K8 1008 aa15.72■□□□□ 0.11
SMCHD1-201ENST00000320876 SIAH3Q8IW03 269 aa15.72■□□□□ 0.11
SMCHD1-201ENST00000320876 TPPP3Q9BW30 176 aa15.72■□□□□ 0.11
SMCHD1-201ENST00000320876 TIGD3Q6B0B8 471 aa15.71■□□□□ 0.11
SMCHD1-201ENST00000320876 NECAP2Q9NVZ3 263 aa15.71■□□□□ 0.11
SMCHD1-201ENST00000320876 MOKQ9UQ07 419 aa15.71■□□□□ 0.11
SMCHD1-201ENST00000320876 SMLR1H3BR10 107 aa15.71■□□□□ 0.11
SMCHD1-201ENST00000320876 CA12O43570 354 aa15.71■□□□□ 0.11
SMCHD1-201ENST00000320876 ZNF91Q05481 1191 aa15.71■□□□□ 0.11
SMCHD1-201ENST00000320876 CNTN4Q8IWV2 1026 aa15.71■□□□□ 0.11
SMCHD1-201ENST00000320876 SECTM1Q8WVN6 248 aa15.71■□□□□ 0.11
SMCHD1-201ENST00000320876 VN1R3Q9BXE9 311 aa15.71■□□□□ 0.11
SMCHD1-201ENST00000320876 KDM4EB2RXH2 506 aaPredicted RBP15.71■□□□□ 0.11
SMCHD1-201ENST00000320876 NAGAP17050 411 aa15.71■□□□□ 0.11
SMCHD1-201ENST00000320876 SIRPAP78324 504 aa15.71■□□□□ 0.11
SMCHD1-201ENST00000320876 WDR88Q6ZMY6 472 aa15.71■□□□□ 0.11
SMCHD1-201ENST00000320876 TMEM217Q8N7C4 229 aa15.71■□□□□ 0.11
SMCHD1-201ENST00000320876 TCRBP04435 133 aa15.71■□□□□ 0.11
SMCHD1-201ENST00000320876 HMGN2P05204 90 aaKnown RBP15.71■□□□□ 0.11
SMCHD1-201ENST00000320876 OR8U8P0C7N1 319 aa15.71■□□□□ 0.11
SMCHD1-201ENST00000320876 SGK494L7N484 410 aa15.71■□□□□ 0.11
SMCHD1-201ENST00000320876 ZNF728P0DKX0 622 aa15.71■□□□□ 0.11
SMCHD1-201ENST00000320876 SRMP19623 302 aa15.71■□□□□ 0.11
SMCHD1-201ENST00000320876 MEP1BQ16820 701 aa15.71■□□□□ 0.11
SMCHD1-201ENST00000320876 Q499Y3 187 aa15.71■□□□□ 0.11
SMCHD1-201ENST00000320876 OR7E24Q6IFN5 339 aa15.71■□□□□ 0.11
SMCHD1-201ENST00000320876 H3F3CQ6NXT2 135 aa15.71■□□□□ 0.11
SMCHD1-201ENST00000320876 KCNRGQ8N5I3 272 aa15.71■□□□□ 0.11
SMCHD1-201ENST00000320876 LRFN5Q96NI6 719 aa15.71■□□□□ 0.11
SMCHD1-201ENST00000320876 OR7D2Q96RA2 312 aa15.71■□□□□ 0.11
SMCHD1-201ENST00000320876 ITGB4P16144 1822 aa15.71■□□□□ 0.11
SMCHD1-201ENST00000320876 ZFP92A6NM28 416 aa15.71■□□□□ 0.11
SMCHD1-201ENST00000320876 BMP1P13497 986 aa15.71■□□□□ 0.11
SMCHD1-201ENST00000320876 IDUAP35475 653 aa15.71■□□□□ 0.11
SMCHD1-201ENST00000320876 NLGN4YQ8NFZ3 816 aaPredicted RBP15.71■□□□□ 0.11
SMCHD1-201ENST00000320876 DOK4Q8TEW6 326 aa15.71■□□□□ 0.11
SMCHD1-201ENST00000320876 SUSD2Q9UGT4 822 aa15.71■□□□□ 0.11
SMCHD1-201ENST00000320876 EPHA4P54764 986 aa15.71■□□□□ 0.1
SMCHD1-201ENST00000320876 OR5AR1Q8NGP9 310 aa15.71■□□□□ 0.1
SMCHD1-201ENST00000320876 SLX4Q8IY92 1834 aa15.71■□□□□ 0.1
SMCHD1-201ENST00000320876 NPIPA5A0A0B4J1W7 369 aa15.7■□□□□ 0.1
SMCHD1-201ENST00000320876 NPIPA7E9PJI5 369 aa15.7■□□□□ 0.1
SMCHD1-201ENST00000320876 NPIPA8P0DM63 369 aa15.7■□□□□ 0.1
SMCHD1-201ENST00000320876 CD68P34810 354 aaPredicted RBP15.7■□□□□ 0.1
SMCHD1-201ENST00000320876 RUNX2Q13950 521 aa15.7■□□□□ 0.1
SMCHD1-201ENST00000320876 OR8U1Q8NH10 309 aa15.7■□□□□ 0.1
SMCHD1-201ENST00000320876 PIGCQ92535 297 aa15.7■□□□□ 0.1
SMCHD1-201ENST00000320876 SLC25A46Q96AG3 418 aa15.7■□□□□ 0.1
SMCHD1-201ENST00000320876 CD63P08962 238 aa15.7■□□□□ 0.1
SMCHD1-201ENST00000320876 TSPAN31Q12999 210 aa15.7■□□□□ 0.1
SMCHD1-201ENST00000320876 GTDC1Q4AE62 458 aa15.7■□□□□ 0.1
SMCHD1-201ENST00000320876 MOB1BQ7L9L4 216 aa15.7■□□□□ 0.1
SMCHD1-201ENST00000320876 LRRC18Q8N456 261 aa15.7■□□□□ 0.1
SMCHD1-201ENST00000320876 WDR76Q9H967 626 aa15.7■□□□□ 0.1
SMCHD1-201ENST00000320876 UBQLN4Q9NRR5 601 aa15.7■□□□□ 0.1
SMCHD1-201ENST00000320876 SEC16AO15027 2179 aa15.7■□□□□ 0.1
SMCHD1-201ENST00000320876 HBA1P69905 142 aa15.7■□□□□ 0.1
SMCHD1-201ENST00000320876 NPSR1Q6W5P4 371 aa15.7■□□□□ 0.1
SMCHD1-201ENST00000320876 SIGLECL1Q8N7X8 197 aa15.7■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms