RNA–Protein interactions for RNA: ENST00000318007.9

PDLIM5-202, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 1,960 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-202ENST00000318007 UBE2FQ969M7 185 aa13.78□□□□□ -0.2
PDLIM5-202ENST00000318007 TRIB1Q96RU8 372 aa13.78□□□□□ -0.2
PDLIM5-202ENST00000318007 ADI1Q9BV57 179 aa13.78□□□□□ -0.2
PDLIM5-202ENST00000318007 PRRG4Q9BZD6 226 aa13.78□□□□□ -0.2
PDLIM5-202ENST00000318007 CHST11Q9NPF2 352 aa13.78□□□□□ -0.2
PDLIM5-202ENST00000318007 MED29Q9NX70 200 aa13.78□□□□□ -0.2
PDLIM5-202ENST00000318007 RALYQ9UKM9 306 aaKnown RBP13.78□□□□□ -0.2
PDLIM5-202ENST00000318007 CDH10Q9Y6N8 788 aa13.78□□□□□ -0.2
PDLIM5-202ENST00000318007 PLPP3O14495 311 aa13.77□□□□□ -0.21
PDLIM5-202ENST00000318007 AQP7O14520 342 aa13.77□□□□□ -0.21
PDLIM5-202ENST00000318007 PMS2P2O95744 297 aa13.77□□□□□ -0.21
PDLIM5-202ENST00000318007 ABOP16442 354 aa13.77□□□□□ -0.21
PDLIM5-202ENST00000318007 NOS3P29474 1203 aa13.77□□□□□ -0.21
PDLIM5-202ENST00000318007 PTGS2P35354 604 aa13.77□□□□□ -0.21
PDLIM5-202ENST00000318007 TDGF1P3P51864 188 aa13.77□□□□□ -0.21
PDLIM5-202ENST00000318007 SLC35A1P78382 337 aa13.77□□□□□ -0.21
PDLIM5-202ENST00000318007 PUDPQ08623 228 aa13.77□□□□□ -0.21
PDLIM5-202ENST00000318007 GINS1Q14691 196 aa13.77□□□□□ -0.21
PDLIM5-202ENST00000318007 C5orf46Q6UWT4 87 aa13.77□□□□□ -0.21
PDLIM5-202ENST00000318007 GFRALQ6UXV0 394 aa13.77□□□□□ -0.21
PDLIM5-202ENST00000318007 H1FNTQ75WM6 255 aaPredicted RBP13.77□□□□□ -0.21
PDLIM5-202ENST00000318007 CD163Q86VB7 1156 aa13.77□□□□□ -0.21
PDLIM5-202ENST00000318007 PACRGLQ8N7B6 248 aa13.77□□□□□ -0.21
PDLIM5-202ENST00000318007 CLDN22Q8N7P3 220 aa13.77□□□□□ -0.21
PDLIM5-202ENST00000318007 OR4Q3Q8NH05 313 aa13.77□□□□□ -0.21
PDLIM5-202ENST00000318007 CPT1CQ8TCG5 803 aa13.77□□□□□ -0.21
PDLIM5-202ENST00000318007 OTULINQ96BN8 352 aa13.77□□□□□ -0.21
PDLIM5-202ENST00000318007 EMC6Q9BV81 110 aa13.77□□□□□ -0.21
PDLIM5-202ENST00000318007 FAM118AQ9NWS6 357 aa13.77□□□□□ -0.21
PDLIM5-202ENST00000318007 GPR52Q9Y2T5 361 aa13.77□□□□□ -0.21
PDLIM5-202ENST00000318007 CLCA1A8K7I4 914 aa13.76□□□□□ -0.21
PDLIM5-202ENST00000318007 MS4A18H0YCH9 400 aa13.76□□□□□ -0.21
PDLIM5-202ENST00000318007 H7C1C5 153 aa13.76□□□□□ -0.21
PDLIM5-202ENST00000318007 PTP4A3O75365 173 aa13.76□□□□□ -0.21
PDLIM5-202ENST00000318007 AQP8O94778 261 aa13.76□□□□□ -0.21
PDLIM5-202ENST00000318007 NDUFB2O95178 105 aa13.76□□□□□ -0.21
PDLIM5-202ENST00000318007 SLC2A10O95528 541 aa13.76□□□□□ -0.21
PDLIM5-202ENST00000318007 SFTPCP11686 197 aa13.76□□□□□ -0.21
PDLIM5-202ENST00000318007 CDH2P19022 906 aaPredicted RBP13.76□□□□□ -0.21
PDLIM5-202ENST00000318007 CTXN1P60606 82 aa13.76□□□□□ -0.21
PDLIM5-202ENST00000318007 RAC3P60763 192 aa13.76□□□□□ -0.21
PDLIM5-202ENST00000318007 LCN6P62502 163 aa13.76□□□□□ -0.21
PDLIM5-202ENST00000318007 RPS4XP62701 263 aaKnown RBP13.76□□□□□ -0.21
PDLIM5-202ENST00000318007 COX10Q12887 443 aa13.76□□□□□ -0.21
PDLIM5-202ENST00000318007 ZNF239Q16600 458 aaKnown RBP13.76□□□□□ -0.21
PDLIM5-202ENST00000318007 MS4A18Q3C1V0 323 aa13.76□□□□□ -0.21
PDLIM5-202ENST00000318007 NHSL2Q5HYW2 709 aa13.76□□□□□ -0.21
PDLIM5-202ENST00000318007 ZNF324BQ6AW86 544 aaPredicted RBP13.76□□□□□ -0.21
PDLIM5-202ENST00000318007 ACSM5Q6NUN0 579 aa13.76□□□□□ -0.21
PDLIM5-202ENST00000318007 RPRMLQ8N4K4 120 aa13.76□□□□□ -0.21
PDLIM5-202ENST00000318007 SARAFQ96BY9 339 aa13.76□□□□□ -0.21
PDLIM5-202ENST00000318007 RASD2Q96D21 266 aa13.76□□□□□ -0.21
PDLIM5-202ENST00000318007 BBC3Q96PG8 261 aaPredicted RBP13.76□□□□□ -0.21
PDLIM5-202ENST00000318007 ERMAPQ96PL5 475 aaPredicted RBP13.76□□□□□ -0.21
PDLIM5-202ENST00000318007 PLSCR2Q9NRY7 297 aa13.76□□□□□ -0.21
PDLIM5-202ENST00000318007 RASSF1Q9NS23 344 aa13.76□□□□□ -0.21
PDLIM5-202ENST00000318007 HIF3AQ9Y2N7 669 aa13.76□□□□□ -0.21
PDLIM5-202ENST00000318007 IER3IP1Q9Y5U9 82 aa13.76□□□□□ -0.21
PDLIM5-202ENST00000318007 NBASA2RRP1 2371 aa13.76□□□□□ -0.21
PDLIM5-202ENST00000318007 LOC100130705A0A1B0GUX0 176 aa13.76□□□□□ -0.21
PDLIM5-202ENST00000318007 LINC01387J3KSC0 135 aa13.76□□□□□ -0.21
PDLIM5-202ENST00000318007 IMPA2O14732 288 aa13.76□□□□□ -0.21
PDLIM5-202ENST00000318007 BCKDKO14874 412 aa13.76□□□□□ -0.21
PDLIM5-202ENST00000318007 TGM6O95932 706 aa13.76□□□□□ -0.21
PDLIM5-202ENST00000318007 UQCRC1P31930 480 aa13.76□□□□□ -0.21
PDLIM5-202ENST00000318007 CLK1P49759 484 aaKnown RBP13.76□□□□□ -0.21
PDLIM5-202ENST00000318007 RPS3AP61247 264 aaKnown RBP13.76□□□□□ -0.21
PDLIM5-202ENST00000318007 RFX4Q33E94 735 aa13.76□□□□□ -0.21
PDLIM5-202ENST00000318007 WLSQ5T9L3 541 aa13.76□□□□□ -0.21
PDLIM5-202ENST00000318007 EEF1A1P5Q5VTE0 462 aa13.76□□□□□ -0.21
PDLIM5-202ENST00000318007 PAQR6Q6TCH4 344 aa13.76□□□□□ -0.21
PDLIM5-202ENST00000318007 WDFY1Q8IWB7 410 aa13.76□□□□□ -0.21
PDLIM5-202ENST00000318007 CHERPQ8IWX8 916 aaKnown RBP13.76□□□□□ -0.21
PDLIM5-202ENST00000318007 GCNT2Q8N0V5 402 aa13.76□□□□□ -0.21
PDLIM5-202ENST00000318007 DHRSXQ8N5I4 330 aa13.76□□□□□ -0.21
PDLIM5-202ENST00000318007 ZNF555Q8NEP9 628 aa13.76□□□□□ -0.21
PDLIM5-202ENST00000318007 FAM81AQ8TBF8 368 aa13.76□□□□□ -0.21
PDLIM5-202ENST00000318007 CNBD2Q96M20 576 aa13.76□□□□□ -0.21
PDLIM5-202ENST00000318007 SLX1AQ9BQ83 275 aa13.76□□□□□ -0.21
PDLIM5-202ENST00000318007 POLDIP3Q9BY77 421 aaKnown RBP13.76□□□□□ -0.21
PDLIM5-202ENST00000318007 GRIP2Q9C0E4 1043 aa13.76□□□□□ -0.21
PDLIM5-202ENST00000318007 MRPL39Q9NYK5 338 aaKnown RBP13.76□□□□□ -0.21
PDLIM5-202ENST00000318007 IL20Q9NYY1 176 aa13.76□□□□□ -0.21
PDLIM5-202ENST00000318007 TVP23BQ9NYZ1 205 aa13.76□□□□□ -0.21
PDLIM5-202ENST00000318007 TINAGQ9UJW2 476 aa13.76□□□□□ -0.21
PDLIM5-202ENST00000318007 TRAPPC4Q9Y296 219 aa13.76□□□□□ -0.21
PDLIM5-202ENST00000318007 GMPPBQ9Y5P6 360 aa13.76□□□□□ -0.21
PDLIM5-202ENST00000318007 RCBTB2O95199 551 aa13.75□□□□□ -0.21
PDLIM5-202ENST00000318007 FKBP2P26885 142 aaKnown RBP13.75□□□□□ -0.21
PDLIM5-202ENST00000318007 PDSS1Q5T2R2 415 aa13.75□□□□□ -0.21
PDLIM5-202ENST00000318007 CARD17Q5XLA6 110 aa13.75□□□□□ -0.21
PDLIM5-202ENST00000318007 SLC27A4Q6P1M0 643 aa13.75□□□□□ -0.21
PDLIM5-202ENST00000318007 CD300LDQ6UXZ3 194 aa13.75□□□□□ -0.21
PDLIM5-202ENST00000318007 RPTNQ6XPR3 784 aa13.75□□□□□ -0.21
PDLIM5-202ENST00000318007 FCRLAQ7L513 359 aa13.75□□□□□ -0.21
PDLIM5-202ENST00000318007 BCDIN3DQ7Z5W3 292 aaKnown RBP13.75□□□□□ -0.21
PDLIM5-202ENST00000318007 PARP8Q8N3A8 854 aa13.75□□□□□ -0.21
PDLIM5-202ENST00000318007 OR2T33Q8NG76 320 aa13.75□□□□□ -0.21
PDLIM5-202ENST00000318007 CPNE4Q96A23 557 aaPredicted RBP13.75□□□□□ -0.21
PDLIM5-202ENST00000318007 ZHX1-C8orf76Q96EF9 292 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms