RNA–Protein interactions for RNA: ENST00000317677.9

CPNE1-201, Transcript of copine 1, humanhuman

TSL 1 (best) BASIC

Gene CPNE1, Length 1,961 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-201ENST00000317677 LYPD3O95274 346 aa11.96□□□□□ -0.5
CPNE1-201ENST00000317677 IFNA4P05014 189 aa11.96□□□□□ -0.5
CPNE1-201ENST00000317677 GKN3PP0CG01 181 aa11.96□□□□□ -0.5
CPNE1-201ENST00000317677 CT45A8P0DMV1 189 aa11.96□□□□□ -0.5
CPNE1-201ENST00000317677 CT45A9P0DMV2 189 aa11.96□□□□□ -0.5
CPNE1-201ENST00000317677 DNASE1P24855 282 aa11.96□□□□□ -0.5
CPNE1-201ENST00000317677 IDH2P48735 452 aaKnown RBP11.96□□□□□ -0.5
CPNE1-201ENST00000317677 CENPAP49450 140 aa11.96□□□□□ -0.5
CPNE1-201ENST00000317677 TAS2R41P59536 307 aa11.96□□□□□ -0.5
CPNE1-201ENST00000317677 CCL7P80098 99 aa11.96□□□□□ -0.5
CPNE1-201ENST00000317677 FGL1Q08830 312 aa11.96□□□□□ -0.5
CPNE1-201ENST00000317677 NR0B2Q15466 257 aa11.96□□□□□ -0.5
CPNE1-201ENST00000317677 RSPO4Q2I0M5 234 aaPredicted RBP11.96□□□□□ -0.5
CPNE1-201ENST00000317677 CT45A2Q5DJT8 189 aa11.96□□□□□ -0.5
CPNE1-201ENST00000317677 PDSS1Q5T2R2 415 aa11.96□□□□□ -0.5
CPNE1-201ENST00000317677 MRPL2Q5T653 305 aaKnown RBP11.96□□□□□ -0.5
CPNE1-201ENST00000317677 C1orf94Q6P1W5 598 aa11.96□□□□□ -0.5
CPNE1-201ENST00000317677 TMEM71Q6P5X7 295 aa11.96□□□□□ -0.5
CPNE1-201ENST00000317677 RASSF6Q6ZTQ3 369 aa11.96□□□□□ -0.5
CPNE1-201ENST00000317677 PRICKLE2Q7Z3G6 844 aa11.96□□□□□ -0.5
CPNE1-201ENST00000317677 NANOGP1Q8N7R0 232 aa11.96□□□□□ -0.5
CPNE1-201ENST00000317677 C16orf52Q8NHV5 167 aa11.96□□□□□ -0.5
CPNE1-201ENST00000317677 PTPMT1Q8WUK0 201 aaPredicted RBP11.96□□□□□ -0.5
CPNE1-201ENST00000317677 PCNPQ8WW12 178 aaKnown RBP11.96□□□□□ -0.5
CPNE1-201ENST00000317677 DUSP23Q9BVJ7 150 aa11.96□□□□□ -0.5
CPNE1-201ENST00000317677 MND1Q9BWT6 205 aa11.96□□□□□ -0.5
CPNE1-201ENST00000317677 PARD6AQ9NPB6 346 aa11.96□□□□□ -0.5
CPNE1-201ENST00000317677 BIN3Q9NQY0 253 aa11.96□□□□□ -0.5
CPNE1-201ENST00000317677 FGF21Q9NSA1 209 aa11.96□□□□□ -0.5
CPNE1-201ENST00000317677 PFDN2Q9UHV9 154 aa11.96□□□□□ -0.5
CPNE1-201ENST00000317677 TMEM5Q9Y2B1 443 aa11.96□□□□□ -0.5
CPNE1-201ENST00000317677 CDHR4A6H8M9 788 aa11.95□□□□□ -0.5
CPNE1-201ENST00000317677 OR6C65A6NJZ3 312 aa11.95□□□□□ -0.5
CPNE1-201ENST00000317677 GNB5O14775 395 aa11.95□□□□□ -0.5
CPNE1-201ENST00000317677 NUPL2O15504 423 aaKnown RBP11.95□□□□□ -0.5
CPNE1-201ENST00000317677 CFIP05156 583 aa11.95□□□□□ -0.5
CPNE1-201ENST00000317677 DBIP07108 87 aaKnown RBP11.95□□□□□ -0.5
CPNE1-201ENST00000317677 SULT1A3P0DMM9 295 aa11.95□□□□□ -0.5
CPNE1-201ENST00000317677 SULT1A4P0DMN0 295 aa11.95□□□□□ -0.5
CPNE1-201ENST00000317677 NID1P14543 1247 aa11.95□□□□□ -0.5
CPNE1-201ENST00000317677 PNLIPP16233 465 aa11.95□□□□□ -0.5
CPNE1-201ENST00000317677 INPP1P49441 399 aa11.95□□□□□ -0.5
CPNE1-201ENST00000317677 AKR1D1P51857 326 aa11.95□□□□□ -0.5
CPNE1-201ENST00000317677 PGDP52209 483 aa11.95□□□□□ -0.5
CPNE1-201ENST00000317677 FOXL2P58012 376 aa11.95□□□□□ -0.5
CPNE1-201ENST00000317677 CDC42P60953 191 aa11.95□□□□□ -0.5
CPNE1-201ENST00000317677 DHODHQ02127 395 aa11.95□□□□□ -0.5
CPNE1-201ENST00000317677 ILKQ13418 452 aa11.95□□□□□ -0.5
CPNE1-201ENST00000317677 SQSTM1Q13501 440 aa11.95□□□□□ -0.5
CPNE1-201ENST00000317677 GPR176Q14439 515 aa11.95□□□□□ -0.5
CPNE1-201ENST00000317677 NNATQ16517 81 aa11.95□□□□□ -0.5
CPNE1-201ENST00000317677 C1orf189Q5VU69 101 aa11.95□□□□□ -0.5
CPNE1-201ENST00000317677 HACD4Q5VWC8 232 aa11.95□□□□□ -0.5
CPNE1-201ENST00000317677 CHMP1BQ7LBR1 199 aa11.95□□□□□ -0.5
CPNE1-201ENST00000317677 GDF7Q7Z4P5 450 aa11.95□□□□□ -0.5
CPNE1-201ENST00000317677 KMT5CQ86Y97 462 aa11.95□□□□□ -0.5
CPNE1-201ENST00000317677 RCBTB1Q8NDN9 531 aa11.95□□□□□ -0.5
CPNE1-201ENST00000317677 SGK3Q96BR1 496 aa11.95□□□□□ -0.5
CPNE1-201ENST00000317677 MVB12AQ96EY5 273 aa11.95□□□□□ -0.5
CPNE1-201ENST00000317677 KCTD7Q96MP8 289 aa11.95□□□□□ -0.5
CPNE1-201ENST00000317677 ARRDC1-AS1Q9H2J1 176 aa11.95□□□□□ -0.5
CPNE1-201ENST00000317677 ESRP2Q9H6T0 727 aaKnown RBP11.95□□□□□ -0.5
CPNE1-201ENST00000317677 BRD7Q9NPI1 651 aa11.95□□□□□ -0.5
CPNE1-201ENST00000317677 DLL4Q9NR61 685 aa11.95□□□□□ -0.5
CPNE1-201ENST00000317677 SLC13A4Q9UKG4 626 aa11.95□□□□□ -0.5
CPNE1-201ENST00000317677 FRYLO94915 3013 aa11.95□□□□□ -0.5
CPNE1-201ENST00000317677 AGRPO00253 132 aa11.94□□□□□ -0.5
CPNE1-201ENST00000317677 PIP5K1CO60331 668 aa11.94□□□□□ -0.5
CPNE1-201ENST00000317677 CSO75390 466 aaKnown RBP11.94□□□□□ -0.5
CPNE1-201ENST00000317677 AK1P00568 194 aa11.94□□□□□ -0.5
CPNE1-201ENST00000317677 NMBP08949 121 aa11.94□□□□□ -0.5
CPNE1-201ENST00000317677 POU1F1P28069 291 aa11.94□□□□□ -0.5
CPNE1-201ENST00000317677 SOX3P41225 446 aa11.94□□□□□ -0.5
CPNE1-201ENST00000317677 RFX3P48380 749 aa11.94□□□□□ -0.5
CPNE1-201ENST00000317677 DSG2Q14126 1118 aa11.94□□□□□ -0.5
CPNE1-201ENST00000317677 VWA2Q5GFL6 755 aa11.94□□□□□ -0.5
CPNE1-201ENST00000317677 C12orf73Q69YU5 71 aa11.94□□□□□ -0.5
CPNE1-201ENST00000317677 CD300LDQ6UXZ3 194 aa11.94□□□□□ -0.5
CPNE1-201ENST00000317677 C3P1Q6ZMU1 363 aa11.94□□□□□ -0.5
CPNE1-201ENST00000317677 WDR88Q6ZMY6 472 aa11.94□□□□□ -0.5
CPNE1-201ENST00000317677 COX15Q7KZN9 410 aa11.94□□□□□ -0.5
CPNE1-201ENST00000317677 STPG2Q8N412 459 aa11.94□□□□□ -0.5
CPNE1-201ENST00000317677 EID2Q8N6I1 236 aa11.94□□□□□ -0.5
CPNE1-201ENST00000317677 PTCHD1Q96NR3 888 aa11.94□□□□□ -0.5
CPNE1-201ENST00000317677 LMF1Q96S06 567 aa11.94□□□□□ -0.5
CPNE1-201ENST00000317677 PRSS27Q9BQR3 290 aa11.94□□□□□ -0.5
CPNE1-201ENST00000317677 KATNB1Q9BVA0 655 aa11.94□□□□□ -0.5
CPNE1-201ENST00000317677 POLR2J3Q9H1A7 115 aaKnown RBP11.94□□□□□ -0.5
CPNE1-201ENST00000317677 OR10A5Q9H207 317 aa11.94□□□□□ -0.5
CPNE1-201ENST00000317677 SLC22A11Q9NSA0 550 aa11.94□□□□□ -0.5
CPNE1-201ENST00000317677 ZNF275Q9NSD4 429 aaPredicted RBP11.94□□□□□ -0.5
CPNE1-201ENST00000317677 KLHL28Q9NXS3 571 aa11.94□□□□□ -0.5
CPNE1-201ENST00000317677 CACNA1AO00555 2505 aa11.94□□□□□ -0.5
CPNE1-201ENST00000317677 NPIPB9F8W1W9 429 aa11.94□□□□□ -0.5
CPNE1-201ENST00000317677 GTPBP1O00178 669 aaKnown RBP11.94□□□□□ -0.5
CPNE1-201ENST00000317677 PRAMEF2O60811 474 aa11.94□□□□□ -0.5
CPNE1-201ENST00000317677 TIAF1O95411 115 aa11.94□□□□□ -0.5
CPNE1-201ENST00000317677 ADRB1P08588 477 aa11.94□□□□□ -0.5
CPNE1-201ENST00000317677 PEPDP12955 493 aa11.94□□□□□ -0.5
CPNE1-201ENST00000317677 CPEP16870 476 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms