RNA–Protein interactions for RNA: ENST00000316763.7

VRK3-201, Transcript of vaccinia related kinase 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VRK3, Length 1,938 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-201ENST00000316763 SEC16AO15027 2179 aa12.93□□□□□ -0.34
VRK3-201ENST00000316763 FAM240BA0A1B0GVZ2 78 aa12.93□□□□□ -0.34
VRK3-201ENST00000316763 CENPXA8MT69 81 aa12.93□□□□□ -0.34
VRK3-201ENST00000316763 GNB5O14775 395 aa12.93□□□□□ -0.34
VRK3-201ENST00000316763 SCRG1O75711 98 aa12.93□□□□□ -0.34
VRK3-201ENST00000316763 MT-CO3P00414 261 aa12.93□□□□□ -0.34
VRK3-201ENST00000316763 GYPBP06028 91 aa12.93□□□□□ -0.34
VRK3-201ENST00000316763 HIST1H1CP16403 213 aaKnown RBP12.93□□□□□ -0.34
VRK3-201ENST00000316763 ELK1P19419 428 aa12.93□□□□□ -0.34
VRK3-201ENST00000316763 SDHBP21912 280 aa12.93□□□□□ -0.34
VRK3-201ENST00000316763 HLA-DMAP28067 261 aa12.93□□□□□ -0.34
VRK3-201ENST00000316763 PYCR1P32322 319 aa12.93□□□□□ -0.34
VRK3-201ENST00000316763 RORAP35398 523 aa12.93□□□□□ -0.34
VRK3-201ENST00000316763 PLA2G5P39877 138 aa12.93□□□□□ -0.34
VRK3-201ENST00000316763 GGTLC2Q14390 218 aa12.93□□□□□ -0.34
VRK3-201ENST00000316763 PON3Q15166 354 aa12.93□□□□□ -0.34
VRK3-201ENST00000316763 NDUFA5Q16718 116 aa12.93□□□□□ -0.34
VRK3-201ENST00000316763 ARHGAP40Q5TG30 622 aa12.93□□□□□ -0.34
VRK3-201ENST00000316763 HES3Q5TGS1 186 aa12.93□□□□□ -0.34
VRK3-201ENST00000316763 COX15Q7KZN9 410 aa12.93□□□□□ -0.34
VRK3-201ENST00000316763 PPP1R3BQ86XI6 285 aa12.93□□□□□ -0.34
VRK3-201ENST00000316763 SYS1Q8N2H4 156 aa12.93□□□□□ -0.34
VRK3-201ENST00000316763 ZNF527Q8NB42 609 aa12.93□□□□□ -0.34
VRK3-201ENST00000316763 DUSP18Q8NEJ0 188 aa12.93□□□□□ -0.34
VRK3-201ENST00000316763 SDR9C7Q8NEX9 313 aa12.93□□□□□ -0.34
VRK3-201ENST00000316763 OR7G1Q8NGA0 311 aa12.93□□□□□ -0.34
VRK3-201ENST00000316763 ST6GAL2Q96JF0 529 aa12.93□□□□□ -0.34
VRK3-201ENST00000316763 TGIF2Q9GZN2 237 aa12.93□□□□□ -0.34
VRK3-201ENST00000316763 CYSLTR2Q9NS75 346 aa12.93□□□□□ -0.34
VRK3-201ENST00000316763 FBXL4Q9UKA2 621 aa12.93□□□□□ -0.34
VRK3-201ENST00000316763 N6AMT1Q9Y5N5 214 aa12.93□□□□□ -0.34
VRK3-201ENST00000316763 KNTC1P50748 2209 aa12.93□□□□□ -0.34
VRK3-201ENST00000316763 IGLV3-12A0A075B6K2 115 aa12.92□□□□□ -0.34
VRK3-201ENST00000316763 OR7A10O76100 309 aa12.92□□□□□ -0.34
VRK3-201ENST00000316763 RBMS1P29558 406 aaKnown RBP12.92□□□□□ -0.34
VRK3-201ENST00000316763 CCKBRP32239 447 aa12.92□□□□□ -0.34
VRK3-201ENST00000316763 ACVR1BP36896 505 aa12.92□□□□□ -0.34
VRK3-201ENST00000316763 PRPS1P60891 318 aa12.92□□□□□ -0.34
VRK3-201ENST00000316763 NNATQ16517 81 aa12.92□□□□□ -0.34
VRK3-201ENST00000316763 ACSM3Q53FZ2 586 aa12.92□□□□□ -0.34
VRK3-201ENST00000316763 SLC35D3Q5M8T2 416 aa12.92□□□□□ -0.34
VRK3-201ENST00000316763 ZNF385CQ66K41 422 aaPredicted RBP12.92□□□□□ -0.34
VRK3-201ENST00000316763 ZNF57Q68EA5 555 aaPredicted RBP12.92□□□□□ -0.34
VRK3-201ENST00000316763 SFXN4Q6P4A7 337 aa12.92□□□□□ -0.34
VRK3-201ENST00000316763 PXKQ7Z7A4 578 aa12.92□□□□□ -0.34
VRK3-201ENST00000316763 SLC35F2Q8IXU6 374 aa12.92□□□□□ -0.34
VRK3-201ENST00000316763 UBE2J2Q8N2K1 259 aa12.92□□□□□ -0.34
VRK3-201ENST00000316763 ZNF615Q8N8J6 731 aa12.92□□□□□ -0.34
VRK3-201ENST00000316763 C7orf57Q8NEG2 295 aa12.92□□□□□ -0.34
VRK3-201ENST00000316763 SLC7A6Q92536 515 aa12.92□□□□□ -0.34
VRK3-201ENST00000316763 ZMYND19Q96E35 227 aaPredicted RBP12.92□□□□□ -0.34
VRK3-201ENST00000316763 YIPF2Q9BWQ6 316 aa12.92□□□□□ -0.34
VRK3-201ENST00000316763 HDHD2Q9H0R4 259 aa12.92□□□□□ -0.34
VRK3-201ENST00000316763 APMAPQ9HDC9 416 aa12.92□□□□□ -0.34
VRK3-201ENST00000316763 B3GAT2Q9NPZ5 323 aa12.92□□□□□ -0.34
VRK3-201ENST00000316763 PTPRBP23467 1997 aa12.92□□□□□ -0.34
VRK3-201ENST00000316763 MCIDASD6RGH6 385 aa12.92□□□□□ -0.34
VRK3-201ENST00000316763 DVL2O14641 736 aa12.92□□□□□ -0.34
VRK3-201ENST00000316763 OGG1O15527 345 aa12.92□□□□□ -0.34
VRK3-201ENST00000316763 PNMTP11086 282 aa12.92□□□□□ -0.34
VRK3-201ENST00000316763 PSKH1P11801 424 aa12.92□□□□□ -0.34
VRK3-201ENST00000316763 HPGDP15428 266 aa12.92□□□□□ -0.34
VRK3-201ENST00000316763 EFNA3P52797 238 aa12.92□□□□□ -0.34
VRK3-201ENST00000316763 MC2RQ01718 297 aa12.92□□□□□ -0.34
VRK3-201ENST00000316763 BCL2A1Q16548 175 aa12.92□□□□□ -0.34
VRK3-201ENST00000316763 ISXQ2M1V0 245 aa12.92□□□□□ -0.34
VRK3-201ENST00000316763 VWA2Q5GFL6 755 aa12.92□□□□□ -0.34
VRK3-201ENST00000316763 OR5J2Q8NH18 312 aa12.92□□□□□ -0.34
VRK3-201ENST00000316763 OR4C3Q8NH37 302 aa12.92□□□□□ -0.34
VRK3-201ENST00000316763 UBASH3BQ8TF42 649 aa12.92□□□□□ -0.34
VRK3-201ENST00000316763 SNX33Q8WV41 574 aa12.92□□□□□ -0.34
VRK3-201ENST00000316763 GHSRQ92847 366 aa12.92□□□□□ -0.34
VRK3-201ENST00000316763 PGLYRP3Q96LB9 341 aa12.92□□□□□ -0.34
VRK3-201ENST00000316763 KCNJ15Q99712 375 aa12.92□□□□□ -0.34
VRK3-201ENST00000316763 SLC7A5P2Q9GIP4 190 aa12.92□□□□□ -0.34
VRK3-201ENST00000316763 KLHL1Q9NR64 748 aa12.92□□□□□ -0.34
VRK3-201ENST00000316763 RASD1Q9Y272 281 aa12.92□□□□□ -0.34
VRK3-201ENST00000316763 RBMX2Q9Y388 322 aaKnown RBP12.92□□□□□ -0.34
VRK3-201ENST00000316763 NPFFR2Q9Y5X5 522 aa12.92□□□□□ -0.34
VRK3-201ENST00000316763 TRAV1-2A0A0B4J238 106 aa12.91□□□□□ -0.34
VRK3-201ENST00000316763 ELOA3DA6NLF2 546 aaPredicted RBP12.91□□□□□ -0.34
VRK3-201ENST00000316763 ARPC3O15145 178 aa12.91□□□□□ -0.34
VRK3-201ENST00000316763 TRIM3O75382 744 aaPredicted RBP12.91□□□□□ -0.34
VRK3-201ENST00000316763 SC5DO75845 299 aa12.91□□□□□ -0.34
VRK3-201ENST00000316763 ARL6IP5O75915 188 aa12.91□□□□□ -0.34
VRK3-201ENST00000316763 CD1AP06126 327 aa12.91□□□□□ -0.34
VRK3-201ENST00000316763 RAB3BP20337 219 aa12.91□□□□□ -0.34
VRK3-201ENST00000316763 NPR2P20594 1047 aa12.91□□□□□ -0.34
VRK3-201ENST00000316763 ADH7P40394 386 aa12.91□□□□□ -0.34
VRK3-201ENST00000316763 DIO1P49895 249 aa12.91□□□□□ -0.34
VRK3-201ENST00000316763 DCDP81605 110 aaKnown RBP12.91□□□□□ -0.34
VRK3-201ENST00000316763 MRPS15P82914 257 aaKnown RBP12.91□□□□□ -0.34
VRK3-201ENST00000316763 NDUFAF6Q330K2 333 aa12.91□□□□□ -0.34
VRK3-201ENST00000316763 ELOA3BQ3SY89 546 aa12.91□□□□□ -0.34
VRK3-201ENST00000316763 NKAIN1Q4KMZ8 207 aa12.91□□□□□ -0.34
VRK3-201ENST00000316763 KLHL26Q53HC5 615 aa12.91□□□□□ -0.34
VRK3-201ENST00000316763 WBP2NLQ6ICG8 309 aa12.91□□□□□ -0.34
VRK3-201ENST00000316763 NR2C2APQ86WQ0 139 aa12.91□□□□□ -0.34
VRK3-201ENST00000316763 LSRQ86X29 649 aaPredicted RBP12.91□□□□□ -0.34
VRK3-201ENST00000316763 SAMD12Q8N8I0 201 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms