RNA–Protein interactions for RNA: ENST00000316105.6

PCDHB9-201, Transcript of protocadherin beta 9, humanhuman

APPRIS P1 BASIC

Gene PCDHB9, Length 4,415 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB9-201ENST00000316105 LIMS3P0CW19 117 aa12.32□□□□□ -0.44
PCDHB9-201ENST00000316105 LIMS4P0CW20 117 aa12.32□□□□□ -0.44
PCDHB9-201ENST00000316105 TGM1P22735 817 aa12.32□□□□□ -0.44
PCDHB9-201ENST00000316105 P2RY14Q15391 338 aa12.32□□□□□ -0.44
PCDHB9-201ENST00000316105 BAK1Q16611 211 aa12.32□□□□□ -0.44
PCDHB9-201ENST00000316105 RAET1LQ5VY80 246 aa12.32□□□□□ -0.44
PCDHB9-201ENST00000316105 LYSMD4Q5XG99 296 aa12.32□□□□□ -0.44
PCDHB9-201ENST00000316105 CCDC190Q86UF4 302 aa12.32□□□□□ -0.44
PCDHB9-201ENST00000316105 MORN4Q8NDC4 146 aa12.32□□□□□ -0.44
PCDHB9-201ENST00000316105 BEST4Q8NFU0 473 aa12.32□□□□□ -0.44
PCDHB9-201ENST00000316105 SLC2A12Q8TD20 617 aa12.32□□□□□ -0.44
PCDHB9-201ENST00000316105 HAVCR2Q8TDQ0 301 aa12.32□□□□□ -0.44
PCDHB9-201ENST00000316105 NEK7Q8TDX7 302 aa12.32□□□□□ -0.44
PCDHB9-201ENST00000316105 HYLS1Q96M11 299 aa12.32□□□□□ -0.44
PCDHB9-201ENST00000316105 FAM60AQ9NP50 221 aa12.32□□□□□ -0.44
PCDHB9-201ENST00000316105 NRIP3Q9NQ35 241 aa12.32□□□□□ -0.44
PCDHB9-201ENST00000316105 ACOXLQ9NUZ1 547 aa12.32□□□□□ -0.44
PCDHB9-201ENST00000316105 WSB2Q9NYS7 404 aaPredicted RBP12.32□□□□□ -0.44
PCDHB9-201ENST00000316105 PFDN2Q9UHV9 154 aa12.32□□□□□ -0.44
PCDHB9-201ENST00000316105 SCP2D1Q9UJQ7 156 aa12.32□□□□□ -0.44
PCDHB9-201ENST00000316105 SPAG17Q6Q759 2223 aa12.32□□□□□ -0.44
PCDHB9-201ENST00000316105 TRBV11-1A0A0K0K1C0 115 aa12.32□□□□□ -0.44
PCDHB9-201ENST00000316105 CDC42EP2O14613 210 aa12.32□□□□□ -0.44
PCDHB9-201ENST00000316105 EFR3AQ14156 821 aa12.32□□□□□ -0.44
PCDHB9-201ENST00000316105 FZD2Q14332 565 aa12.32□□□□□ -0.44
PCDHB9-201ENST00000316105 MED11Q9P086 117 aa12.32□□□□□ -0.44
PCDHB9-201ENST00000316105 NOP16Q9Y3C1 178 aaKnown RBP12.32□□□□□ -0.44
PCDHB9-201ENST00000316105 SPTA1P02549 2419 aa12.32□□□□□ -0.44
PCDHB9-201ENST00000316105 CT62P0C5K7 136 aa12.31□□□□□ -0.44
PCDHB9-201ENST00000316105 SRFP11831 508 aa12.31□□□□□ -0.44
PCDHB9-201ENST00000316105 POU3F1Q03052 451 aaPredicted RBP12.31□□□□□ -0.44
PCDHB9-201ENST00000316105 TFF2Q03403 129 aa12.31□□□□□ -0.44
PCDHB9-201ENST00000316105 FAM53BQ14153 422 aa12.31□□□□□ -0.44
PCDHB9-201ENST00000316105 AKIRIN2Q53H80 203 aa12.31□□□□□ -0.44
PCDHB9-201ENST00000316105 FAM27D1Q5T7N8 215 aa12.31□□□□□ -0.44
PCDHB9-201ENST00000316105 PRAMEF17Q5VTA0 474 aa12.31□□□□□ -0.44
PCDHB9-201ENST00000316105 KCTD20Q7Z5Y7 419 aa12.31□□□□□ -0.44
PCDHB9-201ENST00000316105 OR13C5Q8NGS8 318 aa12.31□□□□□ -0.44
PCDHB9-201ENST00000316105 GPBAR1Q8TDU6 330 aa12.31□□□□□ -0.44
PCDHB9-201ENST00000316105 NUBP2Q9Y5Y2 271 aa12.31□□□□□ -0.44
PCDHB9-201ENST00000316105 IGHV3-20A0A0C4DH32 117 aa12.31□□□□□ -0.44
PCDHB9-201ENST00000316105 LAMTOR5O43504 91 aa12.31□□□□□ -0.44
PCDHB9-201ENST00000316105 HRO43593 1189 aa12.31□□□□□ -0.44
PCDHB9-201ENST00000316105 ELK1P19419 428 aa12.31□□□□□ -0.44
PCDHB9-201ENST00000316105 PTCRAQ6ISU1 281 aaPredicted RBP12.31□□□□□ -0.44
PCDHB9-201ENST00000316105 SYT9Q86SS6 491 aa12.31□□□□□ -0.44
PCDHB9-201ENST00000316105 MCEMP1Q8IX19 187 aa12.31□□□□□ -0.44
PCDHB9-201ENST00000316105 MOKQ9UQ07 419 aa12.31□□□□□ -0.44
PCDHB9-201ENST00000316105 NOX1Q9Y5S8 564 aa12.31□□□□□ -0.44
PCDHB9-201ENST00000316105 PRAMEF25A6NGN4 478 aa12.31□□□□□ -0.44
PCDHB9-201ENST00000316105 HYAL3O43820 417 aaPredicted RBP12.31□□□□□ -0.44
PCDHB9-201ENST00000316105 CREBL2O60519 120 aaPredicted RBP12.31□□□□□ -0.44
PCDHB9-201ENST00000316105 SPNP16150 400 aa12.31□□□□□ -0.44
PCDHB9-201ENST00000316105 CDC20Q12834 499 aa12.31□□□□□ -0.44
PCDHB9-201ENST00000316105 ELAVL1Q15717 326 aaKnown RBP12.31□□□□□ -0.44
PCDHB9-201ENST00000316105 PCGF3Q3KNV8 242 aa12.31□□□□□ -0.44
PCDHB9-201ENST00000316105 SLC43A2Q8N370 569 aa12.31□□□□□ -0.44
PCDHB9-201ENST00000316105 NXF5Q9H1B4 397 aaKnown RBP12.31□□□□□ -0.44
PCDHB9-201ENST00000316105 OR51J1Q9H342 316 aa12.31□□□□□ -0.44
PCDHB9-201ENST00000316105 RCE1Q9Y256 329 aa12.31□□□□□ -0.44
PCDHB9-201ENST00000316105 GLCEO94923 617 aa12.31□□□□□ -0.44
PCDHB9-201ENST00000316105 NKX2-2O95096 273 aa12.31□□□□□ -0.44
PCDHB9-201ENST00000316105 PRICKLE4Q2TBC4 344 aa12.31□□□□□ -0.44
PCDHB9-201ENST00000316105 LYPD4Q6UWN0 246 aa12.31□□□□□ -0.44
PCDHB9-201ENST00000316105 UEVLDQ8IX04 471 aa12.31□□□□□ -0.44
PCDHB9-201ENST00000316105 OR2T35Q8NGX2 323 aa12.31□□□□□ -0.44
PCDHB9-201ENST00000316105 DEDD2Q8WXF8 326 aa12.31□□□□□ -0.44
PCDHB9-201ENST00000316105 TMEM106AQ96A25 262 aa12.31□□□□□ -0.44
PCDHB9-201ENST00000316105 ZNF681Q96N22 645 aa12.31□□□□□ -0.44
PCDHB9-201ENST00000316105 OR5B2Q96R09 309 aa12.31□□□□□ -0.44
PCDHB9-201ENST00000316105 GPA33Q99795 319 aa12.31□□□□□ -0.44
PCDHB9-201ENST00000316105 POTEKPQ9BYX7 375 aa12.31□□□□□ -0.44
PCDHB9-201ENST00000316105 SRRQ9GZT4 340 aa12.31□□□□□ -0.44
PCDHB9-201ENST00000316105 TBC1D24Q9ULP9 559 aa12.31□□□□□ -0.44
PCDHB9-201ENST00000316105 RPH3AQ9Y2J0 694 aaPredicted RBP12.31□□□□□ -0.44
PCDHB9-201ENST00000316105 BOLA1Q9Y3E2 137 aa12.31□□□□□ -0.44
PCDHB9-201ENST00000316105 UNC13CQ8NB66 2214 aa12.31□□□□□ -0.44
PCDHB9-201ENST00000316105 SCN2AQ99250 2005 aa12.3□□□□□ -0.44
PCDHB9-201ENST00000316105 TMED7-TICAM2A0A0A6YYA0 188 aa12.3□□□□□ -0.44
PCDHB9-201ENST00000316105 C5orf51A6NDU8 294 aa12.3□□□□□ -0.44
PCDHB9-201ENST00000316105 A6NL46 340 aa12.3□□□□□ -0.44
PCDHB9-201ENST00000316105 NPIPA2E9PIF3 369 aa12.3□□□□□ -0.44
PCDHB9-201ENST00000316105 NPIPA3F8WFD2 350 aa12.3□□□□□ -0.44
PCDHB9-201ENST00000316105 SCRG1O75711 98 aa12.3□□□□□ -0.44
PCDHB9-201ENST00000316105 FOSL2P15408 326 aa12.3□□□□□ -0.44
PCDHB9-201ENST00000316105 DUSP3P51452 185 aaPredicted RBP12.3□□□□□ -0.44
PCDHB9-201ENST00000316105 SF3B4Q15427 424 aaKnown RBP eCLIP12.3□□□□□ -0.44
PCDHB9-201ENST00000316105 HYAL4Q2M3T9 481 aa12.3□□□□□ -0.44
PCDHB9-201ENST00000316105 EEF1A1P5Q5VTE0 462 aa12.3□□□□□ -0.44
PCDHB9-201ENST00000316105 ZNF584Q8IVC4 421 aa12.3□□□□□ -0.44
PCDHB9-201ENST00000316105 SFTPA2Q8IWL1 248 aa12.3□□□□□ -0.44
PCDHB9-201ENST00000316105 FBLIM1Q8WUP2 373 aa12.3□□□□□ -0.44
PCDHB9-201ENST00000316105 TSSK2Q96PF2 358 aa12.3□□□□□ -0.44
PCDHB9-201ENST00000316105 MLXQ9UH92 298 aa12.3□□□□□ -0.44
PCDHB9-201ENST00000316105 MGAT4AQ9UM21 535 aa12.3□□□□□ -0.44
PCDHB9-201ENST00000316105 TMED7Q9Y3B3 224 aa12.3□□□□□ -0.44
PCDHB9-201ENST00000316105 TRAV36DV7A0A075B6V5 113 aa12.3□□□□□ -0.44
PCDHB9-201ENST00000316105 C2orf72A6NCS6 295 aa12.3□□□□□ -0.44
PCDHB9-201ENST00000316105 MEIS3P1A6NDR6 274 aa12.3□□□□□ -0.44
PCDHB9-201ENST00000316105 A6NIZ1 184 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms