RNA–Protein interactions for RNA: ENST00000316097.12

SCAMP4-201, Transcript of secretory carrier membrane protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCAMP4, Length 2,684 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-201ENST00000316097 STPG2Q8N412 459 aa15.75■□□□□ 0.11
SCAMP4-201ENST00000316097 AVL9Q8NBF6 648 aa15.75■□□□□ 0.11
SCAMP4-201ENST00000316097 CYB561A3Q8NBI2 242 aa15.75■□□□□ 0.11
SCAMP4-201ENST00000316097 CADM4Q8NFZ8 388 aa15.75■□□□□ 0.11
SCAMP4-201ENST00000316097 OR9A2Q8NGT5 310 aa15.75■□□□□ 0.11
SCAMP4-201ENST00000316097 CNOT9Q92600 299 aaKnown RBP15.75■□□□□ 0.11
SCAMP4-201ENST00000316097 CLDN23Q96B33 292 aa15.75■□□□□ 0.11
SCAMP4-201ENST00000316097 CD180Q99467 661 aa15.75■□□□□ 0.11
SCAMP4-201ENST00000316097 IFT27Q9BW83 186 aa15.75■□□□□ 0.11
SCAMP4-201ENST00000316097 TWSG1Q9GZX9 223 aa15.75■□□□□ 0.11
SCAMP4-201ENST00000316097 KRCC1Q9NPI7 259 aaPredicted RBP15.75■□□□□ 0.11
SCAMP4-201ENST00000316097 ZNF275Q9NSD4 429 aaPredicted RBP15.75■□□□□ 0.11
SCAMP4-201ENST00000316097 SIDT1Q9NXL6 827 aaKnown RBP15.75■□□□□ 0.11
SCAMP4-201ENST00000316097 ING1Q9UK53 422 aaPredicted RBP15.75■□□□□ 0.11
SCAMP4-201ENST00000316097 FBXL4Q9UKA2 621 aa15.75■□□□□ 0.11
SCAMP4-201ENST00000316097 CTDSPLO15194 276 aa15.75■□□□□ 0.11
SCAMP4-201ENST00000316097 GYPBP06028 91 aa15.75■□□□□ 0.11
SCAMP4-201ENST00000316097 MAKP20794 623 aa15.75■□□□□ 0.11
SCAMP4-201ENST00000316097 PSMA6P60900 246 aaKnown RBP15.75■□□□□ 0.11
SCAMP4-201ENST00000316097 DHODHQ02127 395 aa15.75■□□□□ 0.11
SCAMP4-201ENST00000316097 ELOCQ15369 112 aa15.75■□□□□ 0.11
SCAMP4-201ENST00000316097 APOOLQ6UXV4 268 aa15.75■□□□□ 0.11
SCAMP4-201ENST00000316097 RFLNBQ8N5W9 214 aa15.75■□□□□ 0.11
SCAMP4-201ENST00000316097 TEX19Q8NA77 164 aa15.75■□□□□ 0.11
SCAMP4-201ENST00000316097 OR52I2Q8NH67 350 aa15.75■□□□□ 0.11
SCAMP4-201ENST00000316097 SMPDL3BQ92485 455 aa15.75■□□□□ 0.11
SCAMP4-201ENST00000316097 LCORQ96JN0 433 aaPredicted RBP15.75■□□□□ 0.11
SCAMP4-201ENST00000316097 DERL3Q96Q80 235 aa15.75■□□□□ 0.11
SCAMP4-201ENST00000316097 DPYSL5Q9BPU6 564 aa15.75■□□□□ 0.11
SCAMP4-201ENST00000316097 ADGRL4Q9HBW9 690 aa15.75■□□□□ 0.11
SCAMP4-201ENST00000316097 NANSQ9NR45 359 aa15.75■□□□□ 0.11
SCAMP4-201ENST00000316097 C20orf141Q9NUB4 165 aa15.75■□□□□ 0.11
SCAMP4-201ENST00000316097 CALML5Q9NZT1 146 aa15.75■□□□□ 0.11
SCAMP4-201ENST00000316097 TRAV1-2A0A0B4J238 106 aa15.74■□□□□ 0.11
SCAMP4-201ENST00000316097 A0A0J9YY10 115 aa15.74■□□□□ 0.11
SCAMP4-201ENST00000316097 FAM86C2PA6NEL3 165 aa15.74■□□□□ 0.11
SCAMP4-201ENST00000316097 MCRIP1C9JLW8 97 aa15.74■□□□□ 0.11
SCAMP4-201ENST00000316097 EMC8O43402 210 aa15.74■□□□□ 0.11
SCAMP4-201ENST00000316097 TP53I3Q53FA7 332 aa15.74■□□□□ 0.11
SCAMP4-201ENST00000316097 FAAP20Q6NZ36 180 aa15.74■□□□□ 0.11
SCAMP4-201ENST00000316097 SLC48A1Q6P1K1 146 aa15.74■□□□□ 0.11
SCAMP4-201ENST00000316097 THSD4Q6ZMP0 1018 aa15.74■□□□□ 0.11
SCAMP4-201ENST00000316097 OOSP2Q86WS3 158 aa15.74■□□□□ 0.11
SCAMP4-201ENST00000316097 FAM71CQ8NEG0 241 aa15.74■□□□□ 0.11
SCAMP4-201ENST00000316097 GAL3ST3Q96A11 431 aa15.74■□□□□ 0.11
SCAMP4-201ENST00000316097 RERGQ96A58 199 aaPredicted RBP15.74■□□□□ 0.11
SCAMP4-201ENST00000316097 PEX11GQ96HA9 241 aa15.74■□□□□ 0.11
SCAMP4-201ENST00000316097 HS6ST2Q96MM7 605 aa15.74■□□□□ 0.11
SCAMP4-201ENST00000316097 MAP3K3Q99759 626 aa15.74■□□□□ 0.11
SCAMP4-201ENST00000316097 ZNF443Q9Y2A4 671 aaPredicted RBP15.74■□□□□ 0.11
SCAMP4-201ENST00000316097 A8MXK9 166 aa15.74■□□□□ 0.11
SCAMP4-201ENST00000316097 TPPPO94811 219 aa15.74■□□□□ 0.11
SCAMP4-201ENST00000316097 GIPP09681 153 aaPredicted RBP15.74■□□□□ 0.11
SCAMP4-201ENST00000316097 ANXA7P20073 488 aaKnown RBP15.74■□□□□ 0.11
SCAMP4-201ENST00000316097 FOXK2Q01167 660 aa15.74■□□□□ 0.11
SCAMP4-201ENST00000316097 UBE2NLQ5JXB2 153 aa15.74■□□□□ 0.11
SCAMP4-201ENST00000316097 ARMC6Q6NXE6 501 aa15.74■□□□□ 0.11
SCAMP4-201ENST00000316097 NHLRC1Q6VVB1 395 aa15.74■□□□□ 0.11
SCAMP4-201ENST00000316097 MARC2Q969Z3 335 aa15.74■□□□□ 0.11
SCAMP4-201ENST00000316097 ST6GALNAC2Q9UJ37 374 aa15.74■□□□□ 0.11
SCAMP4-201ENST00000316097 PCDHGA9Q9Y5G4 932 aaKnown RBP15.74■□□□□ 0.11
SCAMP4-201ENST00000316097 KHDRBS3O75525 346 aaKnown RBP15.73■□□□□ 0.11
SCAMP4-201ENST00000316097 ATP1B1P05026 303 aa15.73■□□□□ 0.11
SCAMP4-201ENST00000316097 HCCSP53701 268 aa15.73■□□□□ 0.11
SCAMP4-201ENST00000316097 GLDNQ6ZMI3 551 aaPredicted RBP15.73■□□□□ 0.11
SCAMP4-201ENST00000316097 WDR88Q6ZMY6 472 aa15.73■□□□□ 0.11
SCAMP4-201ENST00000316097 SERPINA12Q8IW75 414 aa15.73■□□□□ 0.11
SCAMP4-201ENST00000316097 NT5CQ8TCD5 201 aa15.73■□□□□ 0.11
SCAMP4-201ENST00000316097 LDAHQ9H6V9 325 aa15.73■□□□□ 0.11
SCAMP4-201ENST00000316097 NOX3Q9HBY0 568 aa15.73■□□□□ 0.11
SCAMP4-201ENST00000316097 CMC2Q9NRP2 79 aa15.73■□□□□ 0.11
SCAMP4-201ENST00000316097 MED9Q9NWA0 146 aa15.73■□□□□ 0.11
SCAMP4-201ENST00000316097 KLK11Q9UBX7 282 aa15.73■□□□□ 0.11
SCAMP4-201ENST00000316097 ENTPD2Q9Y5L3 495 aa15.73■□□□□ 0.11
SCAMP4-201ENST00000316097 HRH3Q9Y5N1 445 aa15.73■□□□□ 0.11
SCAMP4-201ENST00000316097 ARPC5O15511 151 aa15.73■□□□□ 0.11
SCAMP4-201ENST00000316097 SUSD5O60279 629 aa15.73■□□□□ 0.11
SCAMP4-201ENST00000316097 LDB3O75112 727 aa15.73■□□□□ 0.11
SCAMP4-201ENST00000316097 CSNK2A2P19784 350 aaPredicted RBP15.73■□□□□ 0.11
SCAMP4-201ENST00000316097 NT5EP21589 574 aa15.73■□□□□ 0.11
SCAMP4-201ENST00000316097 GFERP55789 205 aa15.73■□□□□ 0.11
SCAMP4-201ENST00000316097 NXPH1P58417 271 aa15.73■□□□□ 0.11
SCAMP4-201ENST00000316097 RAP2BP61225 183 aa15.73■□□□□ 0.11
SCAMP4-201ENST00000316097 HLXQ14774 488 aaPredicted RBP15.73■□□□□ 0.11
SCAMP4-201ENST00000316097 PUS10Q3MIT2 529 aaKnown RBP15.73■□□□□ 0.11
SCAMP4-201ENST00000316097 LNX2Q8N448 690 aa15.73■□□□□ 0.11
SCAMP4-201ENST00000316097 SPICQ8N5J4 248 aa15.73■□□□□ 0.11
SCAMP4-201ENST00000316097 TMEM52Q8NDY8 209 aa15.73■□□□□ 0.11
SCAMP4-201ENST00000316097 ADAMTS15Q8TE58 950 aa15.73■□□□□ 0.11
SCAMP4-201ENST00000316097 MOAP1Q96BY2 351 aa15.73■□□□□ 0.11
SCAMP4-201ENST00000316097 ORAI1Q96D31 301 aa15.73■□□□□ 0.11
SCAMP4-201ENST00000316097 SLC35A4Q96G79 324 aa15.73■□□□□ 0.11
SCAMP4-201ENST00000316097 OR14A2Q96R54 314 aa15.73■□□□□ 0.11
SCAMP4-201ENST00000316097 SLC38A3Q99624 504 aa15.73■□□□□ 0.11
SCAMP4-201ENST00000316097 PRSS27Q9BQR3 290 aa15.73■□□□□ 0.11
SCAMP4-201ENST00000316097 IFT46Q9NQC8 304 aa15.73■□□□□ 0.11
SCAMP4-201ENST00000316097 FSCN3Q9NQT6 498 aa15.73■□□□□ 0.11
SCAMP4-201ENST00000316097 CENPVL1A0A0U1RR11 272 aa15.72■□□□□ 0.11
SCAMP4-201ENST00000316097 A0A1B0GVT2 93 aa15.72■□□□□ 0.11
SCAMP4-201ENST00000316097 PDCD5O14737 125 aa15.72■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms