RNA–Protein interactions for RNA: ENST00000315571.5

LDLRAD3-201, Transcript of low density lipoprotein receptor class A domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LDLRAD3, Length 3,798 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAD3-201ENST00000315571 SOCS5O75159 536 aa10.78□□□□□ -0.68
LDLRAD3-201ENST00000315571 F10P00742 488 aa10.78□□□□□ -0.68
LDLRAD3-201ENST00000315571 PTHLHP12272 177 aa10.78□□□□□ -0.68
LDLRAD3-201ENST00000315571 PRPS1L1P21108 318 aa10.78□□□□□ -0.68
LDLRAD3-201ENST00000315571 C5AR1P21730 350 aa10.78□□□□□ -0.68
LDLRAD3-201ENST00000315571 PPIBP23284 216 aaKnown RBP10.78□□□□□ -0.68
LDLRAD3-201ENST00000315571 ADRA1AP35348 466 aa10.78□□□□□ -0.68
LDLRAD3-201ENST00000315571 STC1P52823 247 aa10.78□□□□□ -0.68
LDLRAD3-201ENST00000315571 CNTN1Q12860 1018 aa10.78□□□□□ -0.68
LDLRAD3-201ENST00000315571 SIRPB2Q5JXA9 342 aa10.78□□□□□ -0.68
LDLRAD3-201ENST00000315571 CDPF1Q6NVV7 123 aa10.78□□□□□ -0.68
LDLRAD3-201ENST00000315571 SMARCD3Q6STE5 483 aa10.78□□□□□ -0.68
LDLRAD3-201ENST00000315571 SLC36A4Q6YBV0 504 aa10.78□□□□□ -0.68
LDLRAD3-201ENST00000315571 KCTD9Q7L273 389 aa10.78□□□□□ -0.68
LDLRAD3-201ENST00000315571 OR52I2Q8NH67 350 aa10.78□□□□□ -0.68
LDLRAD3-201ENST00000315571 CASTOR1Q8WTX7 329 aa10.78□□□□□ -0.68
LDLRAD3-201ENST00000315571 MTERF1Q99551 399 aaKnown RBP10.78□□□□□ -0.68
LDLRAD3-201ENST00000315571 MRPL37Q9BZE1 423 aaKnown RBP10.78□□□□□ -0.68
LDLRAD3-201ENST00000315571 GPR61Q9BZJ8 451 aa10.78□□□□□ -0.68
LDLRAD3-201ENST00000315571 GDF2Q9UK05 429 aaPredicted RBP10.78□□□□□ -0.68
LDLRAD3-201ENST00000315571 PRUNE2Q8WUY3 3088 aa10.78□□□□□ -0.68
LDLRAD3-201ENST00000315571 EYSQ5T1H1 3165 aa10.77□□□□□ -0.68
LDLRAD3-201ENST00000315571 GXYLT2A0PJZ3 443 aa10.77□□□□□ -0.68
LDLRAD3-201ENST00000315571 MEIS3P1A6NDR6 274 aa10.77□□□□□ -0.68
LDLRAD3-201ENST00000315571 ANTXRLA6NF34 631 aa10.77□□□□□ -0.68
LDLRAD3-201ENST00000315571 TCF21O43680 179 aa10.77□□□□□ -0.68
LDLRAD3-201ENST00000315571 KLF8O95600 359 aaPredicted RBP10.77□□□□□ -0.68
LDLRAD3-201ENST00000315571 ADAP00813 363 aa10.77□□□□□ -0.68
LDLRAD3-201ENST00000315571 IFNGP01579 166 aa10.77□□□□□ -0.68
LDLRAD3-201ENST00000315571 PRNPP04156 253 aa10.77□□□□□ -0.68
LDLRAD3-201ENST00000315571 CPN1P15169 458 aa10.77□□□□□ -0.68
LDLRAD3-201ENST00000315571 MUC1P15941 1255 aaPredicted RBP10.77□□□□□ -0.68
LDLRAD3-201ENST00000315571 PTNP21246 168 aa10.77□□□□□ -0.68
LDLRAD3-201ENST00000315571 AVPR2P30518 371 aa10.77□□□□□ -0.68
LDLRAD3-201ENST00000315571 NTSR1P30989 418 aa10.77□□□□□ -0.68
LDLRAD3-201ENST00000315571 BTCP35070 178 aa10.77□□□□□ -0.68
LDLRAD3-201ENST00000315571 ELAVL3Q14576 367 aaKnown RBP10.77□□□□□ -0.68
LDLRAD3-201ENST00000315571 IHHQ14623 411 aa10.77□□□□□ -0.68
LDLRAD3-201ENST00000315571 SF1Q15637 639 aaKnown RBP10.77□□□□□ -0.68
LDLRAD3-201ENST00000315571 LBHQ53QV2 105 aaPredicted RBP10.77□□□□□ -0.68
LDLRAD3-201ENST00000315571 ARSIQ5FYB1 569 aa10.77□□□□□ -0.68
LDLRAD3-201ENST00000315571 ZNF705AQ6ZN79 300 aaPredicted RBP10.77□□□□□ -0.68
LDLRAD3-201ENST00000315571 NDUFAF7Q7L592 441 aa10.77□□□□□ -0.68
LDLRAD3-201ENST00000315571 GJD3Q8N144 294 aa10.77□□□□□ -0.68
LDLRAD3-201ENST00000315571 OR2AK2Q8NG84 335 aa10.77□□□□□ -0.68
LDLRAD3-201ENST00000315571 RNF141Q8WVD5 230 aa10.77□□□□□ -0.68
LDLRAD3-201ENST00000315571 PPCDCQ96CD2 204 aa10.77□□□□□ -0.68
LDLRAD3-201ENST00000315571 LANCL2Q9NS86 450 aa10.77□□□□□ -0.68
LDLRAD3-201ENST00000315571 LSM2Q9Y333 95 aaKnown RBP10.77□□□□□ -0.68
LDLRAD3-201ENST00000315571 ENPP4Q9Y6X5 453 aa10.77□□□□□ -0.68
LDLRAD3-201ENST00000315571 TICRRQ7Z2Z1 1910 aa10.77□□□□□ -0.68
LDLRAD3-201ENST00000315571 PIKFYVEQ9Y2I7 2098 aa10.77□□□□□ -0.68
LDLRAD3-201ENST00000315571 LEFTY1O75610 366 aa10.77□□□□□ -0.69
LDLRAD3-201ENST00000315571 STK16O75716 305 aa10.77□□□□□ -0.69
LDLRAD3-201ENST00000315571 OR8U8P0C7N1 319 aa10.77□□□□□ -0.69
LDLRAD3-201ENST00000315571 LAMP1P11279 417 aa10.77□□□□□ -0.69
LDLRAD3-201ENST00000315571 TLX1P31314 330 aaPredicted RBP10.77□□□□□ -0.69
LDLRAD3-201ENST00000315571 RAG2P55895 527 aa10.77□□□□□ -0.69
LDLRAD3-201ENST00000315571 VEZF1Q14119 521 aa10.77□□□□□ -0.69
LDLRAD3-201ENST00000315571 POM121L1PQ3SYA9 428 aa10.77□□□□□ -0.69
LDLRAD3-201ENST00000315571 RRNAD1Q96FB5 475 aaKnown RBP10.77□□□□□ -0.69
LDLRAD3-201ENST00000315571 CDKN2AIPNLQ96HQ2 116 aa10.77□□□□□ -0.69
LDLRAD3-201ENST00000315571 TMEM235A6NFC5 223 aa10.77□□□□□ -0.69
LDLRAD3-201ENST00000315571 C19orf67A6NJJ6 358 aa10.77□□□□□ -0.69
LDLRAD3-201ENST00000315571 SULT2B1O00204 365 aa10.77□□□□□ -0.69
LDLRAD3-201ENST00000315571 PSMD9O00233 223 aa10.77□□□□□ -0.69
LDLRAD3-201ENST00000315571 TFPIP10646 304 aa10.77□□□□□ -0.69
LDLRAD3-201ENST00000315571 KIR2DL1P43626 348 aaPredicted RBP10.77□□□□□ -0.69
LDLRAD3-201ENST00000315571 RHEBQ15382 184 aa10.77□□□□□ -0.69
LDLRAD3-201ENST00000315571 SLC25A35Q3KQZ1 300 aa10.77□□□□□ -0.69
LDLRAD3-201ENST00000315571 C4orf17Q53FE4 359 aa10.77□□□□□ -0.69
LDLRAD3-201ENST00000315571 SYT14P1Q58G82 188 aa10.77□□□□□ -0.69
LDLRAD3-201ENST00000315571 IQCHQ86VS3 1027 aa10.77□□□□□ -0.69
LDLRAD3-201ENST00000315571 UBALD2Q8IYN6 164 aa10.77□□□□□ -0.69
LDLRAD3-201ENST00000315571 ZNF582Q96NG8 517 aaPredicted RBP10.77□□□□□ -0.69
LDLRAD3-201ENST00000315571 LAT2Q9GZY6 243 aa10.77□□□□□ -0.69
LDLRAD3-201ENST00000315571 RHOFQ9HBH0 211 aa10.77□□□□□ -0.69
LDLRAD3-201ENST00000315571 LHX9Q9NQ69 397 aa10.77□□□□□ -0.69
LDLRAD3-201ENST00000315571 WNT16Q9UBV4 365 aa10.77□□□□□ -0.69
LDLRAD3-201ENST00000315571 COL4A3Q01955 1670 aa10.77□□□□□ -0.69
LDLRAD3-201ENST00000315571 MARCH11A6NNE9 402 aa10.76□□□□□ -0.69
LDLRAD3-201ENST00000315571 CCSO14618 274 aa10.76□□□□□ -0.69
LDLRAD3-201ENST00000315571 PDYNP01213 254 aa10.76□□□□□ -0.69
LDLRAD3-201ENST00000315571 TPT1P13693 172 aaKnown RBP10.76□□□□□ -0.69
LDLRAD3-201ENST00000315571 GNSP15586 552 aa10.76□□□□□ -0.69
LDLRAD3-201ENST00000315571 ITPKAP23677 461 aa10.76□□□□□ -0.69
LDLRAD3-201ENST00000315571 ZNF140P52738 457 aaPredicted RBP10.76□□□□□ -0.69
LDLRAD3-201ENST00000315571 MRPS21P82921 87 aaKnown RBP10.76□□□□□ -0.69
LDLRAD3-201ENST00000315571 FOXO1Q12778 655 aa10.76□□□□□ -0.69
LDLRAD3-201ENST00000315571 C9orf64Q5T6V5 341 aa10.76□□□□□ -0.69
LDLRAD3-201ENST00000315571 TNFAIP8L2Q6P589 184 aaPredicted RBP10.76□□□□□ -0.69
LDLRAD3-201ENST00000315571 CERS6Q6ZMG9 384 aa10.76□□□□□ -0.69
LDLRAD3-201ENST00000315571 HMGN2P46Q86SG4 172 aa10.76□□□□□ -0.69
LDLRAD3-201ENST00000315571 TPRA1Q86W33 373 aa10.76□□□□□ -0.69
LDLRAD3-201ENST00000315571 VPS25Q9BRG1 176 aa10.76□□□□□ -0.69
LDLRAD3-201ENST00000315571 OR51V1Q9H2C8 321 aa10.76□□□□□ -0.69
LDLRAD3-201ENST00000315571 KRCC1Q9NPI7 259 aaPredicted RBP10.76□□□□□ -0.69
LDLRAD3-201ENST00000315571 TRIM36Q9NQ86 728 aa10.76□□□□□ -0.69
LDLRAD3-201ENST00000315571 ACER3Q9NUN7 267 aa10.76□□□□□ -0.69
LDLRAD3-201ENST00000315571 C1QTNF3-AMACRE9PGA6 284 aa10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms