RNA–Protein interactions for RNA: ENST00000314045.11

DDX54-202, Transcript of DEAD-box helicase 54, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene DDX54, Length 4,380 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-202ENST00000314045 SLC25A24Q6NUK1 477 aa12.53□□□□□ -0.4
DDX54-202ENST00000314045 IP6K3Q96PC2 410 aa12.53□□□□□ -0.4
DDX54-202ENST00000314045 FUZQ9BT04 418 aa12.53□□□□□ -0.4
DDX54-202ENST00000314045 A4GNTQ9UNA3 340 aa12.53□□□□□ -0.4
DDX54-202ENST00000314045 CAMK2AQ9UQM7 478 aa12.53□□□□□ -0.4
DDX54-202ENST00000314045 IGKV1-8A0A0C4DH67 115 aa12.53□□□□□ -0.4
DDX54-202ENST00000314045 METTL15A6NJ78 407 aa12.53□□□□□ -0.4
DDX54-202ENST00000314045 TOX3O15405 576 aaPredicted RBP12.53□□□□□ -0.4
DDX54-202ENST00000314045 ERGP11308 486 aa12.53□□□□□ -0.4
DDX54-202ENST00000314045 CFL1P23528 166 aaKnown RBP12.53□□□□□ -0.4
DDX54-202ENST00000314045 CBX5P45973 191 aa12.53□□□□□ -0.4
DDX54-202ENST00000314045 NOVA1P51513 510 aaKnown RBP12.53□□□□□ -0.4
DDX54-202ENST00000314045 BCAP31P51572 246 aa12.53□□□□□ -0.4
DDX54-202ENST00000314045 CARD18P57730 90 aa12.53□□□□□ -0.4
DDX54-202ENST00000314045 ZNF517Q6ZMY9 492 aaPredicted RBP12.53□□□□□ -0.4
DDX54-202ENST00000314045 FCAMRQ8WWV6 532 aa12.53□□□□□ -0.4
DDX54-202ENST00000314045 TEAD3Q99594 435 aa12.53□□□□□ -0.4
DDX54-202ENST00000314045 IRF2BPLQ9H1B7 796 aa12.53□□□□□ -0.4
DDX54-202ENST00000314045 UCK1Q9HA47 277 aa12.53□□□□□ -0.4
DDX54-202ENST00000314045 POLE4Q9NR33 117 aa12.53□□□□□ -0.4
DDX54-202ENST00000314045 FBXO34Q9NWN3 711 aa12.53□□□□□ -0.4
DDX54-202ENST00000314045 GRIP1Q9Y3R0 1128 aa12.53□□□□□ -0.4
DDX54-202ENST00000314045 ALDH3B2P48448 385 aa12.53□□□□□ -0.4
DDX54-202ENST00000314045 ART1P52961 327 aa12.53□□□□□ -0.4
DDX54-202ENST00000314045 TGFBR3Q03167 851 aa12.53□□□□□ -0.4
DDX54-202ENST00000314045 RAB11BQ15907 218 aa12.53□□□□□ -0.4
DDX54-202ENST00000314045 C4orf46Q504U0 113 aa12.53□□□□□ -0.4
DDX54-202ENST00000314045 C3orf33Q6P1S2 294 aa12.53□□□□□ -0.4
DDX54-202ENST00000314045 XKRXQ6PP77 449 aa12.53□□□□□ -0.4
DDX54-202ENST00000314045 ARMC10Q8N2F6 343 aa12.53□□□□□ -0.4
DDX54-202ENST00000314045 TMEM178AQ8NBL3 297 aa12.53□□□□□ -0.4
DDX54-202ENST00000314045 TTC9Q92623 222 aa12.53□□□□□ -0.4
DDX54-202ENST00000314045 FCRL1Q96LA6 429 aa12.53□□□□□ -0.4
DDX54-202ENST00000314045 SLC25A18Q9H1K4 315 aa12.53□□□□□ -0.4
DDX54-202ENST00000314045 DUSP21Q9H596 190 aa12.53□□□□□ -0.4
DDX54-202ENST00000314045 WIF1Q9Y5W5 379 aa12.53□□□□□ -0.4
DDX54-202ENST00000314045 CCDC163A0A0D9SF12 145 aa12.52□□□□□ -0.4
DDX54-202ENST00000314045 ARGFXA6NJG6 315 aa12.52□□□□□ -0.4
DDX54-202ENST00000314045 GPRIN2O60269 458 aa12.52□□□□□ -0.4
DDX54-202ENST00000314045 PRTGQ2VWP7 1150 aa12.52□□□□□ -0.4
DDX54-202ENST00000314045 RPL22L1Q6P5R6 122 aaKnown RBP12.52□□□□□ -0.4
DDX54-202ENST00000314045 WDR74Q6RFH5 385 aaPredicted RBP12.52□□□□□ -0.4
DDX54-202ENST00000314045 SLC46A3Q7Z3Q1 461 aa12.52□□□□□ -0.4
DDX54-202ENST00000314045 YRDCQ86U90 279 aaKnown RBP12.52□□□□□ -0.4
DDX54-202ENST00000314045 GRAMD2AQ8IUY3 354 aa12.52□□□□□ -0.4
DDX54-202ENST00000314045 ASB17Q8WXJ9 295 aa12.52□□□□□ -0.4
DDX54-202ENST00000314045 SGCZQ96LD1 299 aa12.52□□□□□ -0.4
DDX54-202ENST00000314045 LMF1Q96S06 567 aa12.52□□□□□ -0.4
DDX54-202ENST00000314045 GINS4Q9BRT9 223 aa12.52□□□□□ -0.4
DDX54-202ENST00000314045 PLEKHA6Q9Y2H5 1048 aa12.52□□□□□ -0.4
DDX54-202ENST00000314045 ARRDC5A6NEK1 342 aa12.52□□□□□ -0.41
DDX54-202ENST00000314045 FTCDNL1E5RQL4 147 aa12.52□□□□□ -0.41
DDX54-202ENST00000314045 PDGFBP01127 241 aaPredicted RBP12.52□□□□□ -0.41
DDX54-202ENST00000314045 PCBP3P57721 371 aaKnown RBP12.52□□□□□ -0.41
DDX54-202ENST00000314045 SYT6Q5T7P8 510 aaPredicted RBP12.52□□□□□ -0.41
DDX54-202ENST00000314045 NIPAL3Q6P499 406 aa12.52□□□□□ -0.41
DDX54-202ENST00000314045 C10orf111Q8N326 155 aa12.52□□□□□ -0.41
DDX54-202ENST00000314045 D2HGDHQ8N465 521 aa12.52□□□□□ -0.41
DDX54-202ENST00000314045 CNEP1R1Q8N9A8 125 aa12.52□□□□□ -0.41
DDX54-202ENST00000314045 ABCG5Q9H222 651 aa12.52□□□□□ -0.41
DDX54-202ENST00000314045 LRFN1Q9P244 771 aa12.52□□□□□ -0.41
DDX54-202ENST00000314045 KLK4Q9Y5K2 254 aa12.52□□□□□ -0.41
DDX54-202ENST00000314045 GGT3PA6NGU5 568 aa12.52□□□□□ -0.41
DDX54-202ENST00000314045 CBX7O95931 251 aa12.52□□□□□ -0.41
DDX54-202ENST00000314045 SMIM18P0DKX4 95 aa12.52□□□□□ -0.41
DDX54-202ENST00000314045 LCN1P31025 176 aa12.52□□□□□ -0.41
DDX54-202ENST00000314045 MAN2A2P49641 1150 aa12.52□□□□□ -0.41
DDX54-202ENST00000314045 SIRPAP78324 504 aa12.52□□□□□ -0.41
DDX54-202ENST00000314045 SF3B4Q15427 424 aaKnown RBP eCLIP12.52□□□□□ -0.412e-6■■■■■ 28.8
DDX54-202ENST00000314045 C9orf135Q5VTT2 229 aa12.52□□□□□ -0.41
DDX54-202ENST00000314045 FAM205BPQ63HN1 556 aa12.52□□□□□ -0.41
DDX54-202ENST00000314045 PM20D2Q8IYS1 436 aa12.52□□□□□ -0.41
DDX54-202ENST00000314045 TRMT10AQ8TBZ6 339 aaKnown RBP12.52□□□□□ -0.41
DDX54-202ENST00000314045 FNDC8Q8TC99 324 aa12.52□□□□□ -0.41
DDX54-202ENST00000314045 ELP5Q8TE02 316 aa12.52□□□□□ -0.41
DDX54-202ENST00000314045 NANOS1Q8WY41 292 aaKnown RBP12.52□□□□□ -0.41
DDX54-202ENST00000314045 ST8SIA1Q92185 356 aa12.52□□□□□ -0.41
DDX54-202ENST00000314045 DCBLD2Q96PD2 775 aa12.52□□□□□ -0.41
DDX54-202ENST00000314045 CMC2Q9NRP2 79 aa12.52□□□□□ -0.41
DDX54-202ENST00000314045 PARPBPQ9NWS1 579 aa12.52□□□□□ -0.41
DDX54-202ENST00000314045 PATJQ8NI35 1801 aa12.52□□□□□ -0.41
DDX54-202ENST00000314045 LOC100509620A0A075B734 347 aa12.51□□□□□ -0.41
DDX54-202ENST00000314045 SLC43A1O75387 559 aa12.51□□□□□ -0.41
DDX54-202ENST00000314045 SLC2A10O95528 541 aa12.51□□□□□ -0.41
DDX54-202ENST00000314045 ABCD3P28288 659 aa12.51□□□□□ -0.41
DDX54-202ENST00000314045 MPEG1Q2M385 716 aa12.51□□□□□ -0.41
DDX54-202ENST00000314045 C8orf82Q6P1X6 216 aaPredicted RBP12.51□□□□□ -0.41
DDX54-202ENST00000314045 UNQ6126/PRO20091Q6UXV3 157 aa12.51□□□□□ -0.41
DDX54-202ENST00000314045 GHSRQ92847 366 aa12.51□□□□□ -0.41
DDX54-202ENST00000314045 TCEAL3Q969E4 200 aa12.51□□□□□ -0.41
DDX54-202ENST00000314045 ARHGDIGQ99819 225 aa12.51□□□□□ -0.41
DDX54-202ENST00000314045 SLC19A3Q9BZV2 496 aa12.51□□□□□ -0.41
DDX54-202ENST00000314045 RBMXL2O75526 392 aaKnown RBP12.51□□□□□ -0.41
DDX54-202ENST00000314045 GATBO75879 557 aaKnown RBP12.51□□□□□ -0.41
DDX54-202ENST00000314045 NKAPLQ5M9Q1 402 aa12.51□□□□□ -0.41
DDX54-202ENST00000314045 ABHD12BQ7Z5M8 362 aaPredicted RBP12.51□□□□□ -0.41
DDX54-202ENST00000314045 FRMD6Q96NE9 622 aa12.51□□□□□ -0.41
DDX54-202ENST00000314045 EMC6Q9BV81 110 aa12.51□□□□□ -0.41
DDX54-202ENST00000314045 BEX2Q9BXY8 128 aa12.51□□□□□ -0.41
DDX54-202ENST00000314045 BEX1Q9HBH7 125 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 219.8 ms