RNA–Protein interactions for RNA: ENST00000312989.11

PPP1CA-201, Transcript of protein phosphatase 1 catalytic subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene PPP1CA, Length 1,389 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1CA-201ENST00000312989 CD8AP01732 235 aa12.79□□□□□ -0.36
PPP1CA-201ENST00000312989 CD3EP07766 207 aa12.79□□□□□ -0.36
PPP1CA-201ENST00000312989 HLA-DOBP13765 273 aa12.79□□□□□ -0.36
PPP1CA-201ENST00000312989 PTH2RP49190 550 aa12.79□□□□□ -0.36
PPP1CA-201ENST00000312989 CYLC2Q14093 348 aaPredicted RBP12.79□□□□□ -0.36
PPP1CA-201ENST00000312989 MS4A18Q3C1V0 323 aa12.79□□□□□ -0.36
PPP1CA-201ENST00000312989 ENTPD8Q5MY95 495 aa12.79□□□□□ -0.36
PPP1CA-201ENST00000312989 SHEQ5VZ18 495 aa12.79□□□□□ -0.36
PPP1CA-201ENST00000312989 ZNF613Q6PF04 617 aa12.79□□□□□ -0.36
PPP1CA-201ENST00000312989 B3GLCTQ6Y288 498 aa12.79□□□□□ -0.36
PPP1CA-201ENST00000312989 PATL1Q86TB9 770 aaKnown RBP12.79□□□□□ -0.36
PPP1CA-201ENST00000312989 TREML1Q86YW5 311 aa12.79□□□□□ -0.36
PPP1CA-201ENST00000312989 SLC30A8Q8IWU4 369 aa12.79□□□□□ -0.36
PPP1CA-201ENST00000312989 TMEM123Q8N131 208 aa12.79□□□□□ -0.36
PPP1CA-201ENST00000312989 C17orf78Q8N4C9 275 aa12.79□□□□□ -0.36
PPP1CA-201ENST00000312989 ALKBH3Q96Q83 286 aaPredicted RBP12.79□□□□□ -0.36
PPP1CA-201ENST00000312989 MCHR1Q99705 422 aa12.79□□□□□ -0.36
PPP1CA-201ENST00000312989 PRSS27Q9BQR3 290 aa12.79□□□□□ -0.36
PPP1CA-201ENST00000312989 TMEM43Q9BTV4 400 aa12.79□□□□□ -0.36
PPP1CA-201ENST00000312989 LINC00470Q9BZP3 86 aa12.79□□□□□ -0.36
PPP1CA-201ENST00000312989 CMTM6Q9NX76 183 aa12.79□□□□□ -0.36
PPP1CA-201ENST00000312989 RPS6KB2Q9UBS0 482 aa12.79□□□□□ -0.36
PPP1CA-201ENST00000312989 RCE1Q9Y256 329 aa12.79□□□□□ -0.36
PPP1CA-201ENST00000312989 B3GALT5Q9Y2C3 310 aa12.79□□□□□ -0.36
PPP1CA-201ENST00000312989 MAGED1Q9Y5V3 778 aaPredicted RBP12.79□□□□□ -0.36
PPP1CA-201ENST00000312989 SETD2Q9BYW2 2564 aaPredicted RBP12.79□□□□□ -0.36
PPP1CA-201ENST00000312989 ABCD4O14678 606 aa12.78□□□□□ -0.36
PPP1CA-201ENST00000312989 ATP8B1O43520 1251 aa12.78□□□□□ -0.36
PPP1CA-201ENST00000312989 CHP2O43745 196 aa12.78□□□□□ -0.36
PPP1CA-201ENST00000312989 OR2T1O43869 369 aa12.78□□□□□ -0.36
PPP1CA-201ENST00000312989 SMPD2O60906 423 aa12.78□□□□□ -0.36
PPP1CA-201ENST00000312989 NPPAP01160 153 aa12.78□□□□□ -0.36
PPP1CA-201ENST00000312989 VEZF1Q14119 521 aa12.78□□□□□ -0.36
PPP1CA-201ENST00000312989 PHYHD1Q5SRE7 291 aa12.78□□□□□ -0.36
PPP1CA-201ENST00000312989 TMEM225Q6GV28 225 aa12.78□□□□□ -0.36
PPP1CA-201ENST00000312989 OR7E24Q6IFN5 339 aa12.78□□□□□ -0.36
PPP1CA-201ENST00000312989 PRSS57Q6UWY2 283 aa12.78□□□□□ -0.36
PPP1CA-201ENST00000312989 SSX8Q7RTT4 187 aa12.78□□□□□ -0.36
PPP1CA-201ENST00000312989 CIARTQ8N365 385 aaPredicted RBP12.78□□□□□ -0.36
PPP1CA-201ENST00000312989 POU5F2Q8N7G0 328 aa12.78□□□□□ -0.36
PPP1CA-201ENST00000312989 POMGNT2Q8NAT1 580 aa12.78□□□□□ -0.36
PPP1CA-201ENST00000312989 OR1K1Q8NGR3 316 aa12.78□□□□□ -0.36
PPP1CA-201ENST00000312989 ADAMTS16Q8TE57 1224 aa12.78□□□□□ -0.36
PPP1CA-201ENST00000312989 RCN3Q96D15 328 aa12.78□□□□□ -0.36
PPP1CA-201ENST00000312989 ZNF837Q96EG3 531 aaPredicted RBP12.78□□□□□ -0.36
PPP1CA-201ENST00000312989 PERPQ96FX8 193 aa12.78□□□□□ -0.36
PPP1CA-201ENST00000312989 OXGR1Q96P68 337 aa12.78□□□□□ -0.36
PPP1CA-201ENST00000312989 GSX1Q9H4S2 264 aaPredicted RBP12.78□□□□□ -0.36
PPP1CA-201ENST00000312989 TMEM27Q9HBJ8 222 aa12.78□□□□□ -0.36
PPP1CA-201ENST00000312989 NGBQ9NPG2 151 aa12.78□□□□□ -0.36
PPP1CA-201ENST00000312989 MRGBPQ9NV56 204 aa12.78□□□□□ -0.36
PPP1CA-201ENST00000312989 CAPN7Q9Y6W3 813 aa12.78□□□□□ -0.36
PPP1CA-201ENST00000312989 CIB4A0PJX0 185 aa12.77□□□□□ -0.37
PPP1CA-201ENST00000312989 CCT8L1PA6NM43 557 aa12.77□□□□□ -0.37
PPP1CA-201ENST00000312989 CPSF4LA6NMK7 179 aaKnown RBP12.77□□□□□ -0.37
PPP1CA-201ENST00000312989 FAM220BPB1ANY3 271 aa12.77□□□□□ -0.37
PPP1CA-201ENST00000312989 E7EQL1 145 aa12.77□□□□□ -0.37
PPP1CA-201ENST00000312989 RPL36A-HNRNPH2H7BZ11 118 aa12.77□□□□□ -0.37
PPP1CA-201ENST00000312989 AIM2O14862 343 aa12.77□□□□□ -0.37
PPP1CA-201ENST00000312989 TMCC2O75069 709 aa12.77□□□□□ -0.37
PPP1CA-201ENST00000312989 TNFRSF1BP20333 461 aa12.77□□□□□ -0.37
PPP1CA-201ENST00000312989 FUT4P22083 530 aa12.77□□□□□ -0.37
PPP1CA-201ENST00000312989 CBLP22681 906 aa12.77□□□□□ -0.37
PPP1CA-201ENST00000312989 CD40P25942 277 aa12.77□□□□□ -0.37
PPP1CA-201ENST00000312989 HIKESHIQ53FT3 197 aa12.77□□□□□ -0.37
PPP1CA-201ENST00000312989 NIPAL3Q6P499 406 aa12.77□□□□□ -0.37
PPP1CA-201ENST00000312989 H1FNTQ75WM6 255 aaPredicted RBP12.77□□□□□ -0.37
PPP1CA-201ENST00000312989 DTX2Q86UW9 622 aa12.77□□□□□ -0.37
PPP1CA-201ENST00000312989 RANBP3LQ86VV4 465 aaPredicted RBP12.77□□□□□ -0.37
PPP1CA-201ENST00000312989 VANGL1Q8TAA9 524 aaPredicted RBP12.77□□□□□ -0.37
PPP1CA-201ENST00000312989 BCL2L2Q92843 193 aaPredicted RBP12.77□□□□□ -0.37
PPP1CA-201ENST00000312989 FBXW5Q969U6 566 aa12.77□□□□□ -0.37
PPP1CA-201ENST00000312989 MUCL1Q96DR8 90 aa12.77□□□□□ -0.37
PPP1CA-201ENST00000312989 OR2M2Q96R28 347 aa12.77□□□□□ -0.37
PPP1CA-201ENST00000312989 SMR3AQ99954 134 aa12.77□□□□□ -0.37
PPP1CA-201ENST00000312989 MYLK2Q9H1R3 596 aa12.77□□□□□ -0.37
PPP1CA-201ENST00000312989 MRPL39Q9NYK5 338 aaKnown RBP12.77□□□□□ -0.37
PPP1CA-201ENST00000312989 UPB1Q9UBR1 384 aa12.77□□□□□ -0.37
PPP1CA-201ENST00000312989 LAMP3Q9UQV4 416 aa12.77□□□□□ -0.37
PPP1CA-201ENST00000312989 ZANQ9Y493 2812 aa12.76□□□□□ -0.37
PPP1CA-201ENST00000312989 CADP27708 2225 aa12.76□□□□□ -0.37
PPP1CA-201ENST00000312989 ZNF503-AS2A6NEH8 195 aa12.76□□□□□ -0.37
PPP1CA-201ENST00000312989 FOSL1P15407 271 aa12.76□□□□□ -0.37
PPP1CA-201ENST00000312989 ZNF83P51522 516 aa12.76□□□□□ -0.37
PPP1CA-201ENST00000312989 CLDN17P56750 224 aa12.76□□□□□ -0.37
PPP1CA-201ENST00000312989 NCALDP61601 193 aa12.76□□□□□ -0.37
PPP1CA-201ENST00000312989 MAPRE2Q15555 327 aa12.76□□□□□ -0.37
PPP1CA-201ENST00000312989 TBRG1Q3YBR2 411 aa12.76□□□□□ -0.37
PPP1CA-201ENST00000312989 HSP90B2PQ58FF3 399 aa12.76□□□□□ -0.37
PPP1CA-201ENST00000312989 INTS11Q5TA45 600 aaKnown RBP12.76□□□□□ -0.37
PPP1CA-201ENST00000312989 C11orf71Q6IPW1 123 aa12.76□□□□□ -0.37
PPP1CA-201ENST00000312989 SLC15A3Q8IY34 581 aa12.76□□□□□ -0.37
PPP1CA-201ENST00000312989 SCAIQ8N9R8 606 aa12.76□□□□□ -0.37
PPP1CA-201ENST00000312989 SMAP2Q8WU79 429 aaPredicted RBP12.76□□□□□ -0.37
PPP1CA-201ENST00000312989 COX4I2Q96KJ9 171 aa12.76□□□□□ -0.37
PPP1CA-201ENST00000312989 SH3GL1Q99961 368 aa12.76□□□□□ -0.37
PPP1CA-201ENST00000312989 TRAF4Q9BUZ4 470 aaPredicted RBP12.76□□□□□ -0.37
PPP1CA-201ENST00000312989 C1QTNF6Q9BXI9 259 aa12.76□□□□□ -0.37
PPP1CA-201ENST00000312989 MEPEQ9NQ76 525 aaPredicted RBP12.76□□□□□ -0.37
PPP1CA-201ENST00000312989 AMDHD2Q9Y303 409 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 68.3 ms