RNA–Protein interactions for RNA: ENST00000308537.4

PDZRN3-202, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 1 (best) BASIC

Gene PDZRN3, Length 1,136 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-202ENST00000308537 ANGPT4Q9Y264 503 aa17.36■□□□□ 0.37
PDZRN3-202ENST00000308537 CR1P17927 2039 aa17.35■□□□□ 0.37
PDZRN3-202ENST00000308537 SONP18583 2426 aaKnown RBP17.35■□□□□ 0.37
PDZRN3-202ENST00000308537 LOC102725191A0A1B0GVB3 256 aa17.35■□□□□ 0.37
PDZRN3-202ENST00000308537 E7EQL1 145 aa17.35■□□□□ 0.37
PDZRN3-202ENST00000308537 H7C1Q1 480 aa17.35■□□□□ 0.37
PDZRN3-202ENST00000308537 M0R082 166 aa17.35■□□□□ 0.37
PDZRN3-202ENST00000308537 M0R3H8 397 aa17.35■□□□□ 0.37
PDZRN3-202ENST00000308537 TRAF3IP2O43734 574 aaPredicted RBP17.35■□□□□ 0.37
PDZRN3-202ENST00000308537 UPK3AO75631 287 aa17.35■□□□□ 0.37
PDZRN3-202ENST00000308537 SERPINB7O75635 380 aa17.35■□□□□ 0.37
PDZRN3-202ENST00000308537 HPRP00739 348 aa17.35■□□□□ 0.37
PDZRN3-202ENST00000308537 BGLAPP02818 100 aa17.35■□□□□ 0.37
PDZRN3-202ENST00000308537 GRPRP30550 384 aa17.35■□□□□ 0.37
PDZRN3-202ENST00000308537 PCGF2P35227 344 aa17.35■□□□□ 0.37
PDZRN3-202ENST00000308537 ZNF83P51522 516 aa17.35■□□□□ 0.37
PDZRN3-202ENST00000308537 CDH12P55289 794 aa17.35■□□□□ 0.37
PDZRN3-202ENST00000308537 RPS4XP62701 263 aaKnown RBP17.35■□□□□ 0.37
PDZRN3-202ENST00000308537 TRMT5Q32P41 509 aaKnown RBP17.35■□□□□ 0.37
PDZRN3-202ENST00000308537 NANOGP8Q6NSW7 305 aa17.35■□□□□ 0.37
PDZRN3-202ENST00000308537 C5orf46Q6UWT4 87 aa17.35■□□□□ 0.37
PDZRN3-202ENST00000308537 WDR88Q6ZMY6 472 aa17.35■□□□□ 0.37
PDZRN3-202ENST00000308537 DNM1P46Q6ZS02 220 aa17.35■□□□□ 0.37
PDZRN3-202ENST00000308537 RBM45Q8IUH3 476 aaKnown RBP17.35■□□□□ 0.37
PDZRN3-202ENST00000308537 WDFY1Q8IWB7 410 aa17.35■□□□□ 0.37
PDZRN3-202ENST00000308537 OR6T1Q8NGN1 323 aa17.35■□□□□ 0.37
PDZRN3-202ENST00000308537 OR10A6Q8NH74 314 aa17.35■□□□□ 0.37
PDZRN3-202ENST00000308537 ZNF417Q8TAU3 575 aa17.35■□□□□ 0.37
PDZRN3-202ENST00000308537 ALKBH3Q96Q83 286 aaPredicted RBP17.35■□□□□ 0.37
PDZRN3-202ENST00000308537 ZNF587Q96SQ5 575 aaPredicted RBP17.35■□□□□ 0.37
PDZRN3-202ENST00000308537 NANOGQ9H9S0 305 aa17.35■□□□□ 0.37
PDZRN3-202ENST00000308537 CISD1Q9NZ45 108 aaKnown RBP17.35■□□□□ 0.37
PDZRN3-202ENST00000308537 TRAV36DV7A0A075B6V5 113 aa17.34■□□□□ 0.37
PDZRN3-202ENST00000308537 MS4A18H0YCH9 400 aa17.34■□□□□ 0.37
PDZRN3-202ENST00000308537 FMO6PO60774 539 aa17.34■□□□□ 0.37
PDZRN3-202ENST00000308537 ABCA1O95477 2261 aa17.34■□□□□ 0.37
PDZRN3-202ENST00000308537 PTAFRP25105 342 aa17.34■□□□□ 0.37
PDZRN3-202ENST00000308537 CDKN1AP38936 164 aa17.34■□□□□ 0.37
PDZRN3-202ENST00000308537 CDH11P55287 796 aa17.34■□□□□ 0.37
PDZRN3-202ENST00000308537 KLF10Q13118 480 aa17.34■□□□□ 0.37
PDZRN3-202ENST00000308537 CYP51A1Q16850 503 aa17.34■□□□□ 0.37
PDZRN3-202ENST00000308537 MS4A18Q3C1V0 323 aa17.34■□□□□ 0.37
PDZRN3-202ENST00000308537 HIKESHIQ53FT3 197 aa17.34■□□□□ 0.37
PDZRN3-202ENST00000308537 RABL3Q5HYI8 236 aa17.34■□□□□ 0.37
PDZRN3-202ENST00000308537 COQ5Q5HYK3 327 aa17.34■□□□□ 0.37
PDZRN3-202ENST00000308537 C11orf71Q6IPW1 123 aa17.34■□□□□ 0.37
PDZRN3-202ENST00000308537 ADPRHL1Q8NDY3 354 aa17.34■□□□□ 0.37
PDZRN3-202ENST00000308537 OR6S1Q8NH40 331 aa17.34■□□□□ 0.37
PDZRN3-202ENST00000308537 SLC47A1Q96FL8 570 aa17.34■□□□□ 0.37
PDZRN3-202ENST00000308537 OXGR1Q96P68 337 aa17.34■□□□□ 0.37
PDZRN3-202ENST00000308537 MOGAT1Q96PD6 335 aa17.34■□□□□ 0.37
PDZRN3-202ENST00000308537 LINC00470Q9BZP3 86 aa17.34■□□□□ 0.37
PDZRN3-202ENST00000308537 RPS6KB2Q9UBS0 482 aa17.34■□□□□ 0.37
PDZRN3-202ENST00000308537 RCE1Q9Y256 329 aa17.34■□□□□ 0.37
PDZRN3-202ENST00000308537 B3GALT5Q9Y2C3 310 aa17.34■□□□□ 0.37
PDZRN3-202ENST00000308537 HIVEP2P31629 2446 aa17.33■□□□□ 0.37
PDZRN3-202ENST00000308537 LRRN3E7EW58 273 aa17.33■□□□□ 0.36
PDZRN3-202ENST00000308537 OR2T1O43869 369 aa17.33■□□□□ 0.36
PDZRN3-202ENST00000308537 NDUFS7O75251 213 aa17.33■□□□□ 0.36
PDZRN3-202ENST00000308537 C8BP07358 591 aa17.33■□□□□ 0.36
PDZRN3-202ENST00000308537 PTNP21246 168 aa17.33■□□□□ 0.36
PDZRN3-202ENST00000308537 ATP5J2P56134 94 aa17.33■□□□□ 0.36
PDZRN3-202ENST00000308537 GUCY1A3Q02108 690 aa17.33■□□□□ 0.36
PDZRN3-202ENST00000308537 SF3A3Q12874 501 aaKnown RBP eCLIP17.33■□□□□ 0.36
PDZRN3-202ENST00000308537 VMACQ2NL98 169 aa17.33■□□□□ 0.36
PDZRN3-202ENST00000308537 SWT1Q5T5J6 900 aaKnown RBP17.33■□□□□ 0.36
PDZRN3-202ENST00000308537 NIPAL3Q6P499 406 aa17.33■□□□□ 0.36
PDZRN3-202ENST00000308537 TMEM108Q6UXF1 575 aa17.33■□□□□ 0.36
PDZRN3-202ENST00000308537 CCDC80Q76M96 950 aa17.33■□□□□ 0.36
PDZRN3-202ENST00000308537 TMEM123Q8N131 208 aa17.33■□□□□ 0.36
PDZRN3-202ENST00000308537 OR1K1Q8NGR3 316 aa17.33■□□□□ 0.36
PDZRN3-202ENST00000308537 C1QTNF6Q9BXI9 259 aa17.33■□□□□ 0.36
PDZRN3-202ENST00000308537 EVA1AQ9H8M9 152 aa17.33■□□□□ 0.36
PDZRN3-202ENST00000308537 USP22Q9UPT9 525 aa17.33■□□□□ 0.36
PDZRN3-202ENST00000308537 AMDHD2Q9Y303 409 aa17.33■□□□□ 0.36
PDZRN3-202ENST00000308537 JMJD1CQ15652 2540 aa17.33■□□□□ 0.36
PDZRN3-202ENST00000308537 ABCA2Q9BZC7 2435 aa17.33■□□□□ 0.36
PDZRN3-202ENST00000308537 RPL36A-HNRNPH2H7BZ11 118 aa17.32■□□□□ 0.36
PDZRN3-202ENST00000308537 AIM2O14862 343 aa17.32■□□□□ 0.36
PDZRN3-202ENST00000308537 HLA-DOBP13765 273 aa17.32■□□□□ 0.36
PDZRN3-202ENST00000308537 ARFIP2P53365 341 aa17.32■□□□□ 0.36
PDZRN3-202ENST00000308537 CLDN17P56750 224 aa17.32■□□□□ 0.36
PDZRN3-202ENST00000308537 TBRG1Q3YBR2 411 aa17.32■□□□□ 0.36
PDZRN3-202ENST00000308537 C1QTNF12Q5T7M4 302 aa17.32■□□□□ 0.36
PDZRN3-202ENST00000308537 REP15Q6BDI9 236 aa17.32■□□□□ 0.36
PDZRN3-202ENST00000308537 H1FNTQ75WM6 255 aaPredicted RBP17.32■□□□□ 0.36
PDZRN3-202ENST00000308537 BCL2L2Q92843 193 aaPredicted RBP17.32■□□□□ 0.36
PDZRN3-202ENST00000308537 LRRC58Q96CX6 371 aa17.32■□□□□ 0.36
PDZRN3-202ENST00000308537 ZNF837Q96EG3 531 aaPredicted RBP17.32■□□□□ 0.36
PDZRN3-202ENST00000308537 RADILQ96JH8 1075 aa17.32■□□□□ 0.36
PDZRN3-202ENST00000308537 MCHR1Q99705 422 aa17.32■□□□□ 0.36
PDZRN3-202ENST00000308537 TMEM43Q9BTV4 400 aa17.32■□□□□ 0.36
PDZRN3-202ENST00000308537 ZNF426Q9BUY5 554 aa17.32■□□□□ 0.36
PDZRN3-202ENST00000308537 PCDHAC1Q9H158 963 aa17.32■□□□□ 0.36
PDZRN3-202ENST00000308537 TMEM27Q9HBJ8 222 aa17.32■□□□□ 0.36
PDZRN3-202ENST00000308537 MGAT4BQ9UQ53 548 aa17.32■□□□□ 0.36
PDZRN3-202ENST00000308537 M0R1B8 84 aa17.31■□□□□ 0.36
PDZRN3-202ENST00000308537 LY6G6DO95868 133 aa17.31■□□□□ 0.36
PDZRN3-202ENST00000308537 IGHV4-39P01824 125 aa17.31■□□□□ 0.36
PDZRN3-202ENST00000308537 TROVE2P10155 538 aaKnown RBP eCLIP17.31■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms