RNA–Protein interactions for RNA: ENST00000308177.4

PCDHGC3-201, Transcript of protocadherin gamma subfamily C, 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGC3, Length 4,725 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-201ENST00000308177 MRPL49Q13405 166 aaKnown RBP10.5□□□□□ -0.73
PCDHGC3-201ENST00000308177 SPIN3Q5JUX0 258 aa10.5□□□□□ -0.73
PCDHGC3-201ENST00000308177 C1orf140Q5VVS0 124 aa10.5□□□□□ -0.73
PCDHGC3-201ENST00000308177 THOC7Q6I9Y2 204 aaKnown RBP10.5□□□□□ -0.73
PCDHGC3-201ENST00000308177 ZNF425Q6IV72 752 aa10.5□□□□□ -0.73
PCDHGC3-201ENST00000308177 ITFG2Q969R8 447 aa10.5□□□□□ -0.73
PCDHGC3-201ENST00000308177 CCNL2Q96S94 520 aaPredicted RBP10.5□□□□□ -0.73
PCDHGC3-201ENST00000308177 MEIOCA2RUB1 952 aa10.5□□□□□ -0.73
PCDHGC3-201ENST00000308177 A6NCN8 305 aa10.5□□□□□ -0.73
PCDHGC3-201ENST00000308177 C2orf72A6NCS6 295 aa10.5□□□□□ -0.73
PCDHGC3-201ENST00000308177 GPX5O75715 221 aa10.5□□□□□ -0.73
PCDHGC3-201ENST00000308177 GLCEO94923 617 aa10.5□□□□□ -0.73
PCDHGC3-201ENST00000308177 PRSS23O95084 383 aa10.5□□□□□ -0.73
PCDHGC3-201ENST00000308177 AMY2BP19961 511 aa10.5□□□□□ -0.73
PCDHGC3-201ENST00000308177 PSPHP78330 225 aa10.5□□□□□ -0.73
PCDHGC3-201ENST00000308177 SLC35D3Q5M8T2 416 aa10.5□□□□□ -0.73
PCDHGC3-201ENST00000308177 ABHD12BQ7Z5M8 362 aaPredicted RBP10.5□□□□□ -0.73
PCDHGC3-201ENST00000308177 OR2L13Q8N349 312 aa10.5□□□□□ -0.73
PCDHGC3-201ENST00000308177 FTMTQ8N4E7 242 aa10.5□□□□□ -0.73
PCDHGC3-201ENST00000308177 OR5T2Q8NGG2 359 aa10.5□□□□□ -0.73
PCDHGC3-201ENST00000308177 KLF15Q9UIH9 416 aa10.5□□□□□ -0.73
PCDHGC3-201ENST00000308177 PADI1Q9ULC6 663 aa10.5□□□□□ -0.73
PCDHGC3-201ENST00000308177 M0R233 179 aa10.5□□□□□ -0.73
PCDHGC3-201ENST00000308177 MT-ATP6P00846 226 aa10.5□□□□□ -0.73
PCDHGC3-201ENST00000308177 ATP1B1P05026 303 aa10.5□□□□□ -0.73
PCDHGC3-201ENST00000308177 TMEM225BP0DP42 221 aa10.5□□□□□ -0.73
PCDHGC3-201ENST00000308177 SNRPBP14678 240 aaKnown RBP10.5□□□□□ -0.73
PCDHGC3-201ENST00000308177 GDF1P27539 372 aa10.5□□□□□ -0.73
PCDHGC3-201ENST00000308177 APEX1P27695 318 aaKnown RBP10.5□□□□□ -0.73
PCDHGC3-201ENST00000308177 SSR4P51571 173 aa10.5□□□□□ -0.73
PCDHGC3-201ENST00000308177 GPR50Q13585 617 aa10.5□□□□□ -0.73
PCDHGC3-201ENST00000308177 ATXN7L3Q14CW9 347 aaPredicted RBP10.5□□□□□ -0.73
PCDHGC3-201ENST00000308177 AGAP6Q5VW22 663 aa10.5□□□□□ -0.73
PCDHGC3-201ENST00000308177 SFXN4Q6P4A7 337 aa10.5□□□□□ -0.73
PCDHGC3-201ENST00000308177 FCRLAQ7L513 359 aa10.5□□□□□ -0.73
PCDHGC3-201ENST00000308177 ZNF565Q8N9K5 539 aa10.5□□□□□ -0.73
PCDHGC3-201ENST00000308177 BRIX1Q8TDN6 353 aaKnown RBP10.5□□□□□ -0.73
PCDHGC3-201ENST00000308177 AGAP4Q96P64 663 aa10.5□□□□□ -0.73
PCDHGC3-201ENST00000308177 NXF5Q9H1B4 397 aaKnown RBP10.5□□□□□ -0.73
PCDHGC3-201ENST00000308177 IRF2BPLQ9H1B7 796 aa10.5□□□□□ -0.73
PCDHGC3-201ENST00000308177 PCED1AQ9H1Q7 454 aa10.5□□□□□ -0.73
PCDHGC3-201ENST00000308177 NRIP3Q9NQ35 241 aa10.5□□□□□ -0.73
PCDHGC3-201ENST00000308177 FZD7O75084 574 aa10.49□□□□□ -0.73
PCDHGC3-201ENST00000308177 MPIG6BO95866 241 aa10.49□□□□□ -0.73
PCDHGC3-201ENST00000308177 ARSBP15848 533 aa10.49□□□□□ -0.73
PCDHGC3-201ENST00000308177 RAB3AP20336 220 aa10.49□□□□□ -0.73
PCDHGC3-201ENST00000308177 PCBP3P57721 371 aaKnown RBP10.49□□□□□ -0.73
PCDHGC3-201ENST00000308177 MALLQ13021 153 aa10.49□□□□□ -0.73
PCDHGC3-201ENST00000308177 OR5D14Q8NGL3 314 aa10.49□□□□□ -0.73
PCDHGC3-201ENST00000308177 TMEM106AQ96A25 262 aa10.49□□□□□ -0.73
PCDHGC3-201ENST00000308177 ZNF350Q9GZX5 532 aa10.49□□□□□ -0.73
PCDHGC3-201ENST00000308177 FANCFQ9NPI8 374 aa10.49□□□□□ -0.73
PCDHGC3-201ENST00000308177 FBXL3Q9UKT7 428 aa10.49□□□□□ -0.73
PCDHGC3-201ENST00000308177 ADAM18Q9Y3Q7 739 aa10.49□□□□□ -0.73
PCDHGC3-201ENST00000308177 MYOFQ9NZM1 2061 aa10.49□□□□□ -0.73
PCDHGC3-201ENST00000308177 ZC3H12DA2A288 527 aaKnown RBP10.49□□□□□ -0.73
PCDHGC3-201ENST00000308177 NAP1L6A6NFF2 107 aa10.49□□□□□ -0.73
PCDHGC3-201ENST00000308177 TMEM212A6NML5 194 aa10.49□□□□□ -0.73
PCDHGC3-201ENST00000308177 DSCR3O14972 297 aa10.49□□□□□ -0.73
PCDHGC3-201ENST00000308177 HSPA12AO43301 675 aa10.49□□□□□ -0.73
PCDHGC3-201ENST00000308177 RAD51DO75771 328 aa10.49□□□□□ -0.73
PCDHGC3-201ENST00000308177 SOD1P00441 154 aa10.49□□□□□ -0.73
PCDHGC3-201ENST00000308177 P2RX1P51575 399 aa10.49□□□□□ -0.73
PCDHGC3-201ENST00000308177 SLC26A5P58743 744 aa10.49□□□□□ -0.73
PCDHGC3-201ENST00000308177 MELKQ14680 651 aa10.49□□□□□ -0.73
PCDHGC3-201ENST00000308177 ZIC1Q15915 447 aa10.49□□□□□ -0.73
PCDHGC3-201ENST00000308177 PRSS41Q7RTY9 318 aa10.49□□□□□ -0.73
PCDHGC3-201ENST00000308177 UBALD2Q8IYN6 164 aa10.49□□□□□ -0.73
PCDHGC3-201ENST00000308177 CLEC1AQ8NC01 280 aa10.49□□□□□ -0.73
PCDHGC3-201ENST00000308177 FAM83FQ8NEG4 500 aaPredicted RBP10.49□□□□□ -0.73
PCDHGC3-201ENST00000308177 NPRL2Q8WTW4 380 aa10.49□□□□□ -0.73
PCDHGC3-201ENST00000308177 TM9SF4Q92544 642 aa10.49□□□□□ -0.73
PCDHGC3-201ENST00000308177 UCN3Q969E3 161 aa10.49□□□□□ -0.73
PCDHGC3-201ENST00000308177 OR14A2Q96R54 314 aa10.49□□□□□ -0.73
PCDHGC3-201ENST00000308177 CLCC1Q96S66 551 aa10.49□□□□□ -0.73
PCDHGC3-201ENST00000308177 CHRDQ9H2X0 955 aa10.49□□□□□ -0.73
PCDHGC3-201ENST00000308177 MBTPS2O43462 519 aa10.49□□□□□ -0.73
PCDHGC3-201ENST00000308177 SCGNO76038 276 aa10.49□□□□□ -0.73
PCDHGC3-201ENST00000308177 POU3F2P20265 443 aaPredicted RBP10.49□□□□□ -0.73
PCDHGC3-201ENST00000308177 DPP4P27487 766 aa10.49□□□□□ -0.73
PCDHGC3-201ENST00000308177 RBMXP38159 391 aaKnown RBP10.49□□□□□ -0.73
PCDHGC3-201ENST00000308177 Q499Y3 187 aa10.49□□□□□ -0.73
PCDHGC3-201ENST00000308177 NIPAL3Q6P499 406 aa10.49□□□□□ -0.73
PCDHGC3-201ENST00000308177 TMPPEQ6ZT21 453 aa10.49□□□□□ -0.73
PCDHGC3-201ENST00000308177 TMEM99Q8N816 258 aa10.49□□□□□ -0.73
PCDHGC3-201ENST00000308177 CADM4Q8NFZ8 388 aa10.49□□□□□ -0.73
PCDHGC3-201ENST00000308177 OR1J4Q8NGS1 313 aa10.49□□□□□ -0.73
PCDHGC3-201ENST00000308177 DYNC2LI1Q8TCX1 351 aa10.49□□□□□ -0.73
PCDHGC3-201ENST00000308177 SIRT3Q9NTG7 399 aaPredicted RBP10.49□□□□□ -0.73
PCDHGC3-201ENST00000308177 GSKIPQ9P0R6 139 aa10.49□□□□□ -0.73
PCDHGC3-201ENST00000308177 PRAMEF25A6NGN4 478 aa10.49□□□□□ -0.73
PCDHGC3-201ENST00000308177 G3V3Y1 287 aa10.49□□□□□ -0.73
PCDHGC3-201ENST00000308177 SELENOFO60613 162 aa10.49□□□□□ -0.73
PCDHGC3-201ENST00000308177 ADAM23O75077 832 aa10.49□□□□□ -0.73
PCDHGC3-201ENST00000308177 IGHEP01854 428 aa10.49□□□□□ -0.73
PCDHGC3-201ENST00000308177 RAB40ALP0C0E4 278 aa10.49□□□□□ -0.73
PCDHGC3-201ENST00000308177 HIST1H1CP16403 213 aaKnown RBP10.49□□□□□ -0.73
PCDHGC3-201ENST00000308177 HMGA2P52926 109 aa10.49□□□□□ -0.73
PCDHGC3-201ENST00000308177 S100A10P60903 97 aa10.49□□□□□ -0.73
PCDHGC3-201ENST00000308177 SPOCK1Q08629 439 aa10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms