RNA–Protein interactions for RNA: ENST00000307859.4

TRIM40-205, Transcript of tripartite motif containing 40, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TRIM40, Length 1,640 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM40-205ENST00000307859 FAM98AQ8NCA5 519 aaKnown RBP10.76□□□□□ -0.69
TRIM40-205ENST00000307859 NPEPL1Q8NDH3 523 aa10.76□□□□□ -0.69
TRIM40-205ENST00000307859 KBTBD8Q8NFY9 601 aa10.76□□□□□ -0.69
TRIM40-205ENST00000307859 OR6S1Q8NH40 331 aa10.76□□□□□ -0.69
TRIM40-205ENST00000307859 OR4K13Q8NH42 304 aa10.76□□□□□ -0.69
TRIM40-205ENST00000307859 TM9SF4Q92544 642 aa10.76□□□□□ -0.69
TRIM40-205ENST00000307859 DACH2Q96NX9 599 aa10.76□□□□□ -0.69
TRIM40-205ENST00000307859 CHCHD6Q9BRQ6 235 aa10.76□□□□□ -0.69
TRIM40-205ENST00000307859 CENPOQ9BU64 300 aa10.76□□□□□ -0.69
TRIM40-205ENST00000307859 NMNAT2Q9BZQ4 307 aa10.76□□□□□ -0.69
TRIM40-205ENST00000307859 DCSTAMPQ9H295 470 aa10.76□□□□□ -0.69
TRIM40-205ENST00000307859 OR51V1Q9H2C8 321 aa10.76□□□□□ -0.69
TRIM40-205ENST00000307859 METTL7AQ9H8H3 244 aa10.76□□□□□ -0.69
TRIM40-205ENST00000307859 ADGRL4Q9HBW9 690 aa10.76□□□□□ -0.69
TRIM40-205ENST00000307859 CPNE5Q9HCH3 593 aa10.76□□□□□ -0.69
TRIM40-205ENST00000307859 KLHL1Q9NR64 748 aa10.76□□□□□ -0.69
TRIM40-205ENST00000307859 SDHAF3Q9NRP4 125 aa10.76□□□□□ -0.69
TRIM40-205ENST00000307859 PPP4R1LQ9P1A2 415 aa10.76□□□□□ -0.69
TRIM40-205ENST00000307859 SEC14L4Q9UDX3 406 aa10.76□□□□□ -0.69
TRIM40-205ENST00000307859 FBXL4Q9UKA2 621 aa10.76□□□□□ -0.69
TRIM40-205ENST00000307859 YARS2Q9Y2Z4 477 aaKnown RBP10.76□□□□□ -0.69
TRIM40-205ENST00000307859 FREM3P0C091 2139 aa10.75□□□□□ -0.69
TRIM40-205ENST00000307859 C2orf72A6NCS6 295 aa10.75□□□□□ -0.69
TRIM40-205ENST00000307859 BLOC1S5-TXNDC5H3BN57 136 aa10.75□□□□□ -0.69
TRIM40-205ENST00000307859 GPX5O75715 221 aa10.75□□□□□ -0.69
TRIM40-205ENST00000307859 SBK2P0C263 348 aa10.75□□□□□ -0.69
TRIM40-205ENST00000307859 TCN2P20062 427 aa10.75□□□□□ -0.69
TRIM40-205ENST00000307859 SDHAP31040 664 aa10.75□□□□□ -0.69
TRIM40-205ENST00000307859 CASP3P42574 277 aa10.75□□□□□ -0.69
TRIM40-205ENST00000307859 RPS7P62081 194 aaKnown RBP10.75□□□□□ -0.69
TRIM40-205ENST00000307859 POU4F2Q12837 409 aa10.75□□□□□ -0.69
TRIM40-205ENST00000307859 SNTA1Q13424 505 aa10.75□□□□□ -0.69
TRIM40-205ENST00000307859 IL10RAQ13651 578 aa10.75□□□□□ -0.69
TRIM40-205ENST00000307859 SGCBQ16585 318 aa10.75□□□□□ -0.69
TRIM40-205ENST00000307859 DGUOKQ16854 277 aa10.75□□□□□ -0.69
TRIM40-205ENST00000307859 EMC4Q5J8M3 183 aa10.75□□□□□ -0.69
TRIM40-205ENST00000307859 FAM69AQ5T7M9 428 aa10.75□□□□□ -0.69
TRIM40-205ENST00000307859 C1orf140Q5VVS0 124 aa10.75□□□□□ -0.69
TRIM40-205ENST00000307859 C1QL3Q5VWW1 255 aa10.75□□□□□ -0.69
TRIM40-205ENST00000307859 OR5M10Q6IEU7 315 aa10.75□□□□□ -0.69
TRIM40-205ENST00000307859 POMZP3Q6PJE2 187 aa10.75□□□□□ -0.69
TRIM40-205ENST00000307859 OPN5Q6U736 354 aa10.75□□□□□ -0.69
TRIM40-205ENST00000307859 DHRS13Q6UX07 377 aa10.75□□□□□ -0.69
TRIM40-205ENST00000307859 B3GLCTQ6Y288 498 aa10.75□□□□□ -0.69
TRIM40-205ENST00000307859 MAMDC2Q7Z304 686 aaPredicted RBP10.75□□□□□ -0.69
TRIM40-205ENST00000307859 DND1Q8IYX4 353 aaKnown RBP10.75□□□□□ -0.69
TRIM40-205ENST00000307859 NTNG2Q96CW9 530 aa10.75□□□□□ -0.69
TRIM40-205ENST00000307859 RASD2Q96D21 266 aa10.75□□□□□ -0.69
TRIM40-205ENST00000307859 FRMD6Q96NE9 622 aa10.75□□□□□ -0.69
TRIM40-205ENST00000307859 SLC24A3Q9HC58 644 aa10.75□□□□□ -0.69
TRIM40-205ENST00000307859 ZNF160Q9HCG1 818 aa10.75□□□□□ -0.69
TRIM40-205ENST00000307859 MED11Q9P086 117 aa10.75□□□□□ -0.69
TRIM40-205ENST00000307859 STUB1Q9UNE7 303 aa10.75□□□□□ -0.69
TRIM40-205ENST00000307859 CAB39Q9Y376 341 aaPredicted RBP10.75□□□□□ -0.69
TRIM40-205ENST00000307859 CHCHD2Q9Y6H1 151 aaPredicted RBP10.75□□□□□ -0.69
TRIM40-205ENST00000307859 PMF1-BGLAPU3KQ54 211 aa10.75□□□□□ -0.69
TRIM40-205ENST00000307859 URB1O60287 2271 aaKnown RBP10.74□□□□□ -0.69
TRIM40-205ENST00000307859 TEX13CA0A0J9YWL9 993 aa10.74□□□□□ -0.69
TRIM40-205ENST00000307859 LOC100506127A0A0U1RQW1 187 aa10.74□□□□□ -0.69
TRIM40-205ENST00000307859 OR6C68A6NDL8 312 aa10.74□□□□□ -0.69
TRIM40-205ENST00000307859 C12orf71A8MTZ7 269 aa10.74□□□□□ -0.69
TRIM40-205ENST00000307859 TP53I11O14683 189 aa10.74□□□□□ -0.69
TRIM40-205ENST00000307859 AHSA1O95433 338 aa10.74□□□□□ -0.69
TRIM40-205ENST00000307859 HPP00738 406 aa10.74□□□□□ -0.69
TRIM40-205ENST00000307859 HIST1H2ABP04908 130 aa10.74□□□□□ -0.69
TRIM40-205ENST00000307859 APOBEC1P41238 236 aaKnown RBP10.74□□□□□ -0.69
TRIM40-205ENST00000307859 CRYBB2P43320 205 aa10.74□□□□□ -0.69
TRIM40-205ENST00000307859 SLC25A1P53007 311 aa10.74□□□□□ -0.69
TRIM40-205ENST00000307859 CTXN1P60606 82 aa10.74□□□□□ -0.69
TRIM40-205ENST00000307859 RPS18P62269 152 aaKnown RBP10.74□□□□□ -0.69
TRIM40-205ENST00000307859 SSPNQ14714 243 aa10.74□□□□□ -0.69
TRIM40-205ENST00000307859 SLC35D3Q5M8T2 416 aa10.74□□□□□ -0.69
TRIM40-205ENST00000307859 HES3Q5TGS1 186 aa10.74□□□□□ -0.69
TRIM40-205ENST00000307859 LCN1P1Q5VSP4 162 aa10.74□□□□□ -0.69
TRIM40-205ENST00000307859 LIPKQ5VXJ0 399 aa10.74□□□□□ -0.69
TRIM40-205ENST00000307859 ZNF322Q6U7Q0 402 aaPredicted RBP10.74□□□□□ -0.69
TRIM40-205ENST00000307859 HIST3H2AQ7L7L0 130 aa10.74□□□□□ -0.69
TRIM40-205ENST00000307859 ZNF843Q8N446 348 aa10.74□□□□□ -0.69
TRIM40-205ENST00000307859 ESX1Q8N693 406 aa10.74□□□□□ -0.69
TRIM40-205ENST00000307859 TMEM99Q8N816 258 aa10.74□□□□□ -0.69
TRIM40-205ENST00000307859 FADS6Q8N9I5 356 aa10.74□□□□□ -0.69
TRIM40-205ENST00000307859 OR2M3Q8NG83 312 aa10.74□□□□□ -0.69
TRIM40-205ENST00000307859 OR9Q1Q8NGQ5 310 aa10.74□□□□□ -0.69
TRIM40-205ENST00000307859 GATAD2BQ8WXI9 593 aa10.74□□□□□ -0.69
TRIM40-205ENST00000307859 HIST1H2ACQ93077 130 aa10.74□□□□□ -0.69
TRIM40-205ENST00000307859 Q96M85 177 aa10.74□□□□□ -0.69
TRIM40-205ENST00000307859 NMNAT3Q96T66 252 aa10.74□□□□□ -0.69
TRIM40-205ENST00000307859 TIMP4Q99727 224 aa10.74□□□□□ -0.69
TRIM40-205ENST00000307859 SLIRPQ9GZT3 109 aaKnown RBP10.74□□□□□ -0.69
TRIM40-205ENST00000307859 FOXJ2Q9P0K8 574 aa10.74□□□□□ -0.69
TRIM40-205ENST00000307859 FARSAQ9Y285 508 aaKnown RBP10.74□□□□□ -0.69
TRIM40-205ENST00000307859 SF3B6Q9Y3B4 125 aaKnown RBP10.74□□□□□ -0.69
TRIM40-205ENST00000307859 SPIN1Q9Y657 262 aaPredicted RBP10.74□□□□□ -0.69
TRIM40-205ENST00000307859 PTPRBP23467 1997 aa10.74□□□□□ -0.69
TRIM40-205ENST00000307859 FTCDNL1E5RQL4 147 aa10.73□□□□□ -0.69
TRIM40-205ENST00000307859 TERTO14746 1132 aaKnown RBP10.73□□□□□ -0.69
TRIM40-205ENST00000307859 ZNF208O43345 1280 aa10.73□□□□□ -0.69
TRIM40-205ENST00000307859 OR2T1O43869 369 aa10.73□□□□□ -0.69
TRIM40-205ENST00000307859 FZD7O75084 574 aa10.73□□□□□ -0.69
TRIM40-205ENST00000307859 LALBAP00709 142 aa10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms