RNA–Protein interactions for RNA: ENST00000307106.3

SMIM4-201, Transcript of small integral membrane protein 4, humanhuman

TSL 2 BASIC

Gene SMIM4, Length 274 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM4-201ENST00000307106 ADPRHL2Q9NX46 363 aa10.08□□□□□ -0.8
SMIM4-201ENST00000307106 TESQ9UGI8 421 aaKnown RBP10.08□□□□□ -0.8
SMIM4-201ENST00000307106 ZNF180Q9UJW8 692 aa10.08□□□□□ -0.8
SMIM4-201ENST00000307106 WIPI2Q9Y4P8 454 aa10.08□□□□□ -0.8
SMIM4-201ENST00000307106 A0A1B0GUS0 222 aa10.07□□□□□ -0.8
SMIM4-201ENST00000307106 CLDN24A6NM45 220 aa10.07□□□□□ -0.8
SMIM4-201ENST00000307106 CLDN25C9JDP6 229 aa10.07□□□□□ -0.8
SMIM4-201ENST00000307106 RPL36A-HNRNPH2H7BZ11 118 aa10.07□□□□□ -0.8
SMIM4-201ENST00000307106 CFLARO15519 480 aa10.07□□□□□ -0.8
SMIM4-201ENST00000307106 SCN2BO60939 215 aa10.07□□□□□ -0.8
SMIM4-201ENST00000307106 SEC14L2O76054 403 aa10.07□□□□□ -0.8
SMIM4-201ENST00000307106 ZNF432O94892 652 aa10.07□□□□□ -0.8
SMIM4-201ENST00000307106 VAMP5O95183 116 aa10.07□□□□□ -0.8
SMIM4-201ENST00000307106 SNRPAP09012 282 aaKnown RBP10.07□□□□□ -0.8
SMIM4-201ENST00000307106 ZNF35P13682 527 aa10.07□□□□□ -0.8
SMIM4-201ENST00000307106 SOAT1P35610 550 aa10.07□□□□□ -0.8
SMIM4-201ENST00000307106 RPL3P39023 403 aaKnown RBP10.07□□□□□ -0.8
SMIM4-201ENST00000307106 P2RY4P51582 365 aa10.07□□□□□ -0.8
SMIM4-201ENST00000307106 RPS23P62266 143 aaKnown RBP10.07□□□□□ -0.8
SMIM4-201ENST00000307106 KCNJ10P78508 379 aa10.07□□□□□ -0.8
SMIM4-201ENST00000307106 CCL8P80075 99 aa10.07□□□□□ -0.8
SMIM4-201ENST00000307106 GALK2Q01415 458 aa10.07□□□□□ -0.8
SMIM4-201ENST00000307106 NKPD1Q17RQ9 610 aa10.07□□□□□ -0.8
SMIM4-201ENST00000307106 CEACAM16Q2WEN9 425 aa10.07□□□□□ -0.8
SMIM4-201ENST00000307106 MMEL1Q495T6 779 aa10.07□□□□□ -0.8
SMIM4-201ENST00000307106 KLF17Q5JT82 389 aaPredicted RBP10.07□□□□□ -0.8
SMIM4-201ENST00000307106 PRAMEF8Q5VWM4 474 aa10.07□□□□□ -0.8
SMIM4-201ENST00000307106 PRAMEF7Q5VXH5 474 aa10.07□□□□□ -0.8
SMIM4-201ENST00000307106 TYW3Q6IPR3 259 aaKnown RBP10.07□□□□□ -0.8
SMIM4-201ENST00000307106 FRMD7Q6ZUT3 714 aa10.07□□□□□ -0.8
SMIM4-201ENST00000307106 RHOUQ7L0Q8 258 aa10.07□□□□□ -0.8
SMIM4-201ENST00000307106 ZNF771Q7L3S4 317 aaPredicted RBP10.07□□□□□ -0.8
SMIM4-201ENST00000307106 HMGN2P46Q86SG4 172 aa10.07□□□□□ -0.8
SMIM4-201ENST00000307106 CCDC36Q8IYA8 594 aa10.07□□□□□ -0.8
SMIM4-201ENST00000307106 DEFB108BQ8NET1 73 aa10.07□□□□□ -0.8
SMIM4-201ENST00000307106 SPATA4Q8NEY3 305 aa10.07□□□□□ -0.8
SMIM4-201ENST00000307106 ANKK1Q8NFD2 765 aa10.07□□□□□ -0.8
SMIM4-201ENST00000307106 KIF18AQ8NI77 898 aa10.07□□□□□ -0.8
SMIM4-201ENST00000307106 ZNF837Q96EG3 531 aaPredicted RBP10.07□□□□□ -0.8
SMIM4-201ENST00000307106 NAPGQ99747 312 aaPredicted RBP10.07□□□□□ -0.8
SMIM4-201ENST00000307106 GAL3ST1Q99999 423 aa10.07□□□□□ -0.8
SMIM4-201ENST00000307106 RBM4BQ9BQ04 359 aaKnown RBP10.07□□□□□ -0.8
SMIM4-201ENST00000307106 TAPBPLQ9BX59 468 aa10.07□□□□□ -0.8
SMIM4-201ENST00000307106 EXD2Q9NVH0 621 aa10.07□□□□□ -0.8
SMIM4-201ENST00000307106 TMED5Q9Y3A6 229 aa10.07□□□□□ -0.8
SMIM4-201ENST00000307106 WDR45Q9Y484 360 aa10.07□□□□□ -0.8
SMIM4-201ENST00000307106 TET2Q6N021 2002 aaPredicted RBP10.07□□□□□ -0.8
SMIM4-201ENST00000307106 PPIAL4EA0A075B759 164 aa10.06□□□□□ -0.8
SMIM4-201ENST00000307106 PPIAL4CA0A0B4J2A2 164 aa10.06□□□□□ -0.8
SMIM4-201ENST00000307106 IGHV1-69-2A0A0G2JMI3 117 aa10.06□□□□□ -0.8
SMIM4-201ENST00000307106 C17orf100A8MU93 164 aa10.06□□□□□ -0.8
SMIM4-201ENST00000307106 PPIAL4DF5H284 164 aa10.06□□□□□ -0.8
SMIM4-201ENST00000307106 HLA-HP01893 362 aa10.06□□□□□ -0.8
SMIM4-201ENST00000307106 CHRM4P08173 479 aa10.06□□□□□ -0.8
SMIM4-201ENST00000307106 PPIAL4FP0DN26 164 aa10.06□□□□□ -0.8
SMIM4-201ENST00000307106 NEFHP12036 1026 aa10.06□□□□□ -0.8
SMIM4-201ENST00000307106 CRYBB2P43320 205 aa10.06□□□□□ -0.8
SMIM4-201ENST00000307106 CLDN17P56750 224 aa10.06□□□□□ -0.8
SMIM4-201ENST00000307106 GNG11P61952 73 aa10.06□□□□□ -0.8
SMIM4-201ENST00000307106 ETF1P62495 437 aaKnown RBP10.06□□□□□ -0.8
SMIM4-201ENST00000307106 TEKQ02763 1124 aa10.06□□□□□ -0.8
SMIM4-201ENST00000307106 FXNQ16595 210 aa10.06□□□□□ -0.8
SMIM4-201ENST00000307106 GSG1Q2KHT4 349 aa10.06□□□□□ -0.8
SMIM4-201ENST00000307106 GALNTL6Q49A17 601 aa10.06□□□□□ -0.8
SMIM4-201ENST00000307106 AP1ARQ63HQ0 302 aa10.06□□□□□ -0.8
SMIM4-201ENST00000307106 C16orf87Q6PH81 154 aa10.06□□□□□ -0.8
SMIM4-201ENST00000307106 LCA5Q86VQ0 697 aa10.06□□□□□ -0.8
SMIM4-201ENST00000307106 CNOT9Q92600 299 aaKnown RBP10.06□□□□□ -0.8
SMIM4-201ENST00000307106 CCDC126Q96EE4 140 aa10.06□□□□□ -0.8
SMIM4-201ENST00000307106 TIMD4Q96H15 378 aa10.06□□□□□ -0.8
SMIM4-201ENST00000307106 SLC35G5Q96KT7 338 aa10.06□□□□□ -0.8
SMIM4-201ENST00000307106 MS4A7Q9GZW8 240 aaPredicted RBP10.06□□□□□ -0.8
SMIM4-201ENST00000307106 BEX1Q9HBH7 125 aa10.06□□□□□ -0.8
SMIM4-201ENST00000307106 GPR35Q9HC97 309 aa10.06□□□□□ -0.8
SMIM4-201ENST00000307106 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP10.06□□□□□ -0.8
SMIM4-201ENST00000307106 ST6GALNAC1Q9NSC7 600 aaPredicted RBP10.06□□□□□ -0.8
SMIM4-201ENST00000307106 ATAD3AQ9NVI7 634 aa10.06□□□□□ -0.8
SMIM4-201ENST00000307106 B3GNT2Q9NY97 397 aa10.06□□□□□ -0.8
SMIM4-201ENST00000307106 FIS1Q9Y3D6 152 aa10.06□□□□□ -0.8
SMIM4-201ENST00000307106 DSPPQ9NZW4 1301 aa10.06□□□□□ -0.8
SMIM4-201ENST00000307106 LSM1O15116 133 aaKnown RBP10.05□□□□□ -0.8
SMIM4-201ENST00000307106 FOXH1O75593 365 aa10.05□□□□□ -0.8
SMIM4-201ENST00000307106 CD79AP11912 226 aa10.05□□□□□ -0.8
SMIM4-201ENST00000307106 ZNF14P17017 642 aaPredicted RBP10.05□□□□□ -0.8
SMIM4-201ENST00000307106 NAA20P61599 178 aa10.05□□□□□ -0.8
SMIM4-201ENST00000307106 HBA1P69905 142 aa10.05□□□□□ -0.8
SMIM4-201ENST00000307106 PIGFQ07326 219 aa10.05□□□□□ -0.8
SMIM4-201ENST00000307106 PCGF3Q3KNV8 242 aa10.05□□□□□ -0.8
SMIM4-201ENST00000307106 ZNF362Q5T0B9 420 aaPredicted RBP10.05□□□□□ -0.8
SMIM4-201ENST00000307106 TMEM154Q6P9G4 183 aa10.05□□□□□ -0.8
SMIM4-201ENST00000307106 USP51Q70EK9 711 aa10.05□□□□□ -0.8
SMIM4-201ENST00000307106 C6orf120Q7Z4R8 191 aa10.05□□□□□ -0.8
SMIM4-201ENST00000307106 RELL1Q8IUW5 271 aa10.05□□□□□ -0.8
SMIM4-201ENST00000307106 CLEC4FQ8N1N0 589 aa10.05□□□□□ -0.8
SMIM4-201ENST00000307106 GPR137CQ8N3F9 429 aa10.05□□□□□ -0.8
SMIM4-201ENST00000307106 NATD1Q8N6N6 113 aa10.05□□□□□ -0.8
SMIM4-201ENST00000307106 GLB1L3Q8NCI6 653 aaPredicted RBP10.05□□□□□ -0.8
SMIM4-201ENST00000307106 OR4F5Q8NH21 305 aa10.05□□□□□ -0.8
SMIM4-201ENST00000307106 MGARPQ8TDB4 240 aa10.05□□□□□ -0.8
SMIM4-201ENST00000307106 ST7LQ8TDW4 575 aa10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms