RNA–Protein interactions for RNA: ENST00000306726.6

PTPN9-201, Transcript of protein tyrosine phosphatase, non-receptor type 9, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PTPN9, Length 3,862 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN9-201ENST00000306726 HHIPQ96QV1 700 aa13.39□□□□□ -0.27
PTPN9-201ENST00000306726 TRIM2Q9C040 744 aa13.39□□□□□ -0.27
PTPN9-201ENST00000306726 AICDAQ9GZX7 198 aa13.39□□□□□ -0.27
PTPN9-201ENST00000306726 ELL3Q9HB65 397 aaPredicted RBP13.39□□□□□ -0.27
PTPN9-201ENST00000306726 GPN1Q9HCN4 374 aaPredicted RBP13.39□□□□□ -0.27
PTPN9-201ENST00000306726 HRASLSQ9HDD0 168 aa13.39□□□□□ -0.27
PTPN9-201ENST00000306726 KLHL9Q9P2J3 617 aa13.39□□□□□ -0.27
PTPN9-201ENST00000306726 DOCK8Q8NF50 2099 aa13.39□□□□□ -0.27
PTPN9-201ENST00000306726 CELSR3Q9NYQ7 3312 aa13.39□□□□□ -0.27
PTPN9-201ENST00000306726 RBBP9O75884 186 aa13.39□□□□□ -0.27
PTPN9-201ENST00000306726 EPXP11678 715 aa13.39□□□□□ -0.27
PTPN9-201ENST00000306726 ITGA3P26006 1051 aa13.39□□□□□ -0.27
PTPN9-201ENST00000306726 CTXN1P60606 82 aa13.39□□□□□ -0.27
PTPN9-201ENST00000306726 LRFN4Q6PJG9 635 aa13.39□□□□□ -0.27
PTPN9-201ENST00000306726 DUSP18Q8NEJ0 188 aa13.39□□□□□ -0.27
PTPN9-201ENST00000306726 OR4D10Q8NGI6 311 aa13.39□□□□□ -0.27
PTPN9-201ENST00000306726 RBP7Q96R05 134 aa13.39□□□□□ -0.27
PTPN9-201ENST00000306726 SLC39A1Q9NY26 324 aa13.39□□□□□ -0.27
PTPN9-201ENST00000306726 MRTO4Q9UKD2 239 aaKnown RBP13.39□□□□□ -0.27
PTPN9-201ENST00000306726 KIAA1549LQ6ZVL6 1849 aa13.39□□□□□ -0.27
PTPN9-201ENST00000306726 METTL12A8MUP2 240 aa13.39□□□□□ -0.27
PTPN9-201ENST00000306726 PYCARD-AS1I3L0S3 204 aa13.39□□□□□ -0.27
PTPN9-201ENST00000306726 ZNF28P17035 718 aa13.39□□□□□ -0.27
PTPN9-201ENST00000306726 FOXL2P58012 376 aa13.39□□□□□ -0.27
PTPN9-201ENST00000306726 REEP5Q00765 189 aa13.39□□□□□ -0.27
PTPN9-201ENST00000306726 ENPP2Q13822 863 aa13.39□□□□□ -0.27
PTPN9-201ENST00000306726 GSG1Q2KHT4 349 aa13.39□□□□□ -0.27
PTPN9-201ENST00000306726 PRDM7Q9NQW5 492 aa13.39□□□□□ -0.27
PTPN9-201ENST00000306726 CGGBP1Q9UFW8 167 aaPredicted RBP13.39□□□□□ -0.27
PTPN9-201ENST00000306726 LAMP5Q9UJQ1 280 aa13.39□□□□□ -0.27
PTPN9-201ENST00000306726 SPTBN2O15020 2390 aa13.38□□□□□ -0.27
PTPN9-201ENST00000306726 LOC105371267A0A1B0GV96 52 aa13.38□□□□□ -0.27
PTPN9-201ENST00000306726 ZNF705EA8MWA4 302 aaPredicted RBP13.38□□□□□ -0.27
PTPN9-201ENST00000306726 VEGFDO43915 354 aa13.38□□□□□ -0.27
PTPN9-201ENST00000306726 KAT7O95251 611 aa13.38□□□□□ -0.27
PTPN9-201ENST00000306726 AKR1C4P17516 323 aa13.38□□□□□ -0.27
PTPN9-201ENST00000306726 SRMP19623 302 aa13.38□□□□□ -0.27
PTPN9-201ENST00000306726 NFYAP23511 347 aaPredicted RBP13.38□□□□□ -0.27
PTPN9-201ENST00000306726 MTNR1BP49286 362 aa13.38□□□□□ -0.27
PTPN9-201ENST00000306726 RUNX2Q13950 521 aa13.38□□□□□ -0.27
PTPN9-201ENST00000306726 CDONQ4KMG0 1287 aa13.38□□□□□ -0.27
PTPN9-201ENST00000306726 CCDC157Q569K6 752 aa13.38□□□□□ -0.27
PTPN9-201ENST00000306726 METRNLQ641Q3 311 aa13.38□□□□□ -0.27
PTPN9-201ENST00000306726 TMEM65Q6PI78 240 aa13.38□□□□□ -0.27
PTPN9-201ENST00000306726 HOMEZQ8IX15 550 aa13.38□□□□□ -0.27
PTPN9-201ENST00000306726 STPG2Q8N412 459 aa13.38□□□□□ -0.27
PTPN9-201ENST00000306726 TMEM106AQ96A25 262 aa13.38□□□□□ -0.27
PTPN9-201ENST00000306726 PELI1Q96FA3 418 aa13.38□□□□□ -0.27
PTPN9-201ENST00000306726 SPACA5Q96QH8 159 aa13.38□□□□□ -0.27
PTPN9-201ENST00000306726 IER2Q9BTL4 223 aa13.38□□□□□ -0.27
PTPN9-201ENST00000306726 PCBD2Q9H0N5 130 aa13.38□□□□□ -0.27
PTPN9-201ENST00000306726 MKKSQ9NPJ1 570 aaPredicted RBP13.38□□□□□ -0.27
PTPN9-201ENST00000306726 HPF1Q9NWY4 346 aa13.38□□□□□ -0.27
PTPN9-201ENST00000306726 IL20Q9NYY1 176 aa13.38□□□□□ -0.27
PTPN9-201ENST00000306726 COMMD9Q9P000 198 aa13.38□□□□□ -0.27
PTPN9-201ENST00000306726 NTMQ9P121 344 aa13.38□□□□□ -0.27
PTPN9-201ENST00000306726 MLXQ9UH92 298 aa13.38□□□□□ -0.27
PTPN9-201ENST00000306726 TRIOBPQ9H2D6 2365 aa13.38□□□□□ -0.27
PTPN9-201ENST00000306726 CACNA1EQ15878 2313 aa13.38□□□□□ -0.27
PTPN9-201ENST00000306726 CDC40O60508 579 aaKnown RBP eCLIP13.38□□□□□ -0.27
PTPN9-201ENST00000306726 RBMS1P29558 406 aaKnown RBP13.38□□□□□ -0.27
PTPN9-201ENST00000306726 FGF9P31371 208 aaPredicted RBP13.38□□□□□ -0.27
PTPN9-201ENST00000306726 SLC6A6P31641 620 aa13.38□□□□□ -0.27
PTPN9-201ENST00000306726 CCR9P51686 369 aa13.38□□□□□ -0.27
PTPN9-201ENST00000306726 MRPS21P82921 87 aaKnown RBP13.38□□□□□ -0.27
PTPN9-201ENST00000306726 CST6Q15828 149 aa13.38□□□□□ -0.27
PTPN9-201ENST00000306726 PLA1AQ53H76 456 aa13.38□□□□□ -0.27
PTPN9-201ENST00000306726 OOSP2Q86WS3 158 aa13.38□□□□□ -0.27
PTPN9-201ENST00000306726 RADILQ96JH8 1075 aa13.38□□□□□ -0.27
PTPN9-201ENST00000306726 OR2M2Q96R28 347 aa13.38□□□□□ -0.27
PTPN9-201ENST00000306726 ZNF768Q9H5H4 540 aaKnown RBP13.38□□□□□ -0.27
PTPN9-201ENST00000306726 LIPT1Q9Y234 373 aa13.38□□□□□ -0.27
PTPN9-201ENST00000306726 SLC35A3Q9Y2D2 325 aa13.38□□□□□ -0.27
PTPN9-201ENST00000306726 LAMA1P25391 3075 aa13.38□□□□□ -0.27
PTPN9-201ENST00000306726 B4DGG1 531 aa13.38□□□□□ -0.27
PTPN9-201ENST00000306726 CASC3O15234 703 aaKnown RBP13.38□□□□□ -0.27
PTPN9-201ENST00000306726 CLEC3AO75596 197 aa13.38□□□□□ -0.27
PTPN9-201ENST00000306726 CBX7O95931 251 aa13.38□□□□□ -0.27
PTPN9-201ENST00000306726 TRAPPC2P0DI81 140 aa13.38□□□□□ -0.27
PTPN9-201ENST00000306726 TRAPPC2BP0DI82 140 aa13.38□□□□□ -0.27
PTPN9-201ENST00000306726 CBR1P16152 277 aa13.38□□□□□ -0.27
PTPN9-201ENST00000306726 SPOCK1Q08629 439 aa13.38□□□□□ -0.27
PTPN9-201ENST00000306726 GAB4Q2WGN9 574 aa13.38□□□□□ -0.27
PTPN9-201ENST00000306726 GLRX5Q86SX6 157 aa13.38□□□□□ -0.27
PTPN9-201ENST00000306726 TMEM185AQ8NFB2 350 aa13.38□□□□□ -0.27
PTPN9-201ENST00000306726 OR51A4Q8NGJ6 313 aa13.38□□□□□ -0.27
PTPN9-201ENST00000306726 ZNRF4Q8WWF5 429 aa13.38□□□□□ -0.27
PTPN9-201ENST00000306726 ADAMTS14Q8WXS8 1223 aa13.38□□□□□ -0.27
PTPN9-201ENST00000306726 C19orf43Q9BQ61 176 aa13.38□□□□□ -0.27
PTPN9-201ENST00000306726 CHST6Q9GZX3 395 aa13.38□□□□□ -0.27
PTPN9-201ENST00000306726 PRSS16Q9NQE7 514 aa13.38□□□□□ -0.27
PTPN9-201ENST00000306726 PHF11Q9UIL8 331 aa13.38□□□□□ -0.27
PTPN9-201ENST00000306726 CACNA1GO43497 2377 aa13.37□□□□□ -0.27
PTPN9-201ENST00000306726 C19orf67A6NJJ6 358 aa13.37□□□□□ -0.27
PTPN9-201ENST00000306726 KDM4EB2RXH2 506 aaPredicted RBP13.37□□□□□ -0.27
PTPN9-201ENST00000306726 ZNF879B4DU55 563 aa13.37□□□□□ -0.27
PTPN9-201ENST00000306726 P2RX6O15547 441 aa13.37□□□□□ -0.27
PTPN9-201ENST00000306726 CTSBP07858 339 aa13.37□□□□□ -0.27
PTPN9-201ENST00000306726 CTHP32929 405 aa13.37□□□□□ -0.27
PTPN9-201ENST00000306726 GRK6P43250 576 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 97.1 ms