RNA–Protein interactions for RNA: ENST00000303383.7

SHCBP1-201, Transcript of SHC binding and spindle associated 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHCBP1, Length 3,461 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-201ENST00000303383 JSRP1Q96MG2 331 aaPredicted RBP13.14□□□□□ -0.31
SHCBP1-201ENST00000303383 C5orf34Q96MH7 638 aa13.14□□□□□ -0.31
SHCBP1-201ENST00000303383 ISYNA1Q9NPH2 558 aa13.14□□□□□ -0.31
SHCBP1-201ENST00000303383 INIPQ9NRY2 104 aa13.14□□□□□ -0.31
SHCBP1-201ENST00000303383 ASB6Q9NWX5 421 aa13.14□□□□□ -0.31
SHCBP1-201ENST00000303383 GSTK1Q9Y2Q3 226 aa13.14□□□□□ -0.31
SHCBP1-201ENST00000303383 C9orf172C9J069 976 aa13.14□□□□□ -0.31
SHCBP1-201ENST00000303383 GPX5O75715 221 aa13.14□□□□□ -0.31
SHCBP1-201ENST00000303383 MT-ND5P03915 603 aa13.14□□□□□ -0.31
SHCBP1-201ENST00000303383 RAB40ALP0C0E4 278 aa13.14□□□□□ -0.31
SHCBP1-201ENST00000303383 APEHP13798 732 aaKnown RBP13.14□□□□□ -0.31
SHCBP1-201ENST00000303383 ZNF322Q6U7Q0 402 aaPredicted RBP13.14□□□□□ -0.31
SHCBP1-201ENST00000303383 SRA1Q9HD15 236 aaKnown RBP13.14□□□□□ -0.31
SHCBP1-201ENST00000303383 TRIM36Q9NQ86 728 aa13.14□□□□□ -0.31
SHCBP1-201ENST00000303383 CNTRLQ7Z7A1 2325 aa13.14□□□□□ -0.31
SHCBP1-201ENST00000303383 DMDP11532 3685 aa13.14□□□□□ -0.31
SHCBP1-201ENST00000303383 CCDC182A6NF36 153 aa13.14□□□□□ -0.31
SHCBP1-201ENST00000303383 J3QLW9 94 aa13.14□□□□□ -0.31
SHCBP1-201ENST00000303383 ARHGEF9O43307 516 aa13.14□□□□□ -0.31
SHCBP1-201ENST00000303383 ZNF19P17023 458 aa13.14□□□□□ -0.31
SHCBP1-201ENST00000303383 DLSTP36957 453 aa13.14□□□□□ -0.31
SHCBP1-201ENST00000303383 CD79BP40259 229 aa13.14□□□□□ -0.31
SHCBP1-201ENST00000303383 MFSD13AQ14CX5 517 aa13.14□□□□□ -0.31
SHCBP1-201ENST00000303383 CSRP2Q16527 193 aa13.14□□□□□ -0.31
SHCBP1-201ENST00000303383 ZNF800Q2TB10 664 aaPredicted RBP eCLIP13.14□□□□□ -0.31
SHCBP1-201ENST00000303383 CDCP2Q5VXM1 449 aa13.14□□□□□ -0.31
SHCBP1-201ENST00000303383 POMGNT2Q8NAT1 580 aa13.14□□□□□ -0.31
SHCBP1-201ENST00000303383 NPEPL1Q8NDH3 523 aa13.14□□□□□ -0.31
SHCBP1-201ENST00000303383 HMG20AQ9NP66 347 aa13.14□□□□□ -0.31
SHCBP1-201ENST00000303383 OR6C68A6NDL8 312 aa13.13□□□□□ -0.31
SHCBP1-201ENST00000303383 TNFSF15O95150 251 aa13.13□□□□□ -0.31
SHCBP1-201ENST00000303383 DLGAP3O95886 979 aa13.13□□□□□ -0.31
SHCBP1-201ENST00000303383 SPI1P17947 270 aa13.13□□□□□ -0.31
SHCBP1-201ENST00000303383 UQCRC1P31930 480 aa13.13□□□□□ -0.31
SHCBP1-201ENST00000303383 S100A5P33763 92 aa13.13□□□□□ -0.31
SHCBP1-201ENST00000303383 CENPAP49450 140 aa13.13□□□□□ -0.31
SHCBP1-201ENST00000303383 DNASE1L3Q13609 305 aa13.13□□□□□ -0.31
SHCBP1-201ENST00000303383 GALEQ14376 348 aa13.13□□□□□ -0.31
SHCBP1-201ENST00000303383 OR7A5Q15622 319 aa13.13□□□□□ -0.31
SHCBP1-201ENST00000303383 SGCBQ16585 318 aa13.13□□□□□ -0.31
SHCBP1-201ENST00000303383 ZNF404Q494X3 552 aa13.13□□□□□ -0.31
SHCBP1-201ENST00000303383 LYPD8Q6UX82 237 aa13.13□□□□□ -0.31
SHCBP1-201ENST00000303383 NLGN4YQ8NFZ3 816 aaPredicted RBP13.13□□□□□ -0.31
SHCBP1-201ENST00000303383 SNX33Q8WV41 574 aa13.13□□□□□ -0.31
SHCBP1-201ENST00000303383 TM9SF4Q92544 642 aa13.13□□□□□ -0.31
SHCBP1-201ENST00000303383 KISS1RQ969F8 398 aaPredicted RBP13.13□□□□□ -0.31
SHCBP1-201ENST00000303383 TMED9Q9BVK6 235 aa13.13□□□□□ -0.31
SHCBP1-201ENST00000303383 TTTY10Q9BZA0 68 aa13.13□□□□□ -0.31
SHCBP1-201ENST00000303383 ADGRL4Q9HBW9 690 aa13.13□□□□□ -0.31
SHCBP1-201ENST00000303383 FOXJ2Q9P0K8 574 aa13.13□□□□□ -0.31
SHCBP1-201ENST00000303383 FAM171A2A8MVW0 826 aa13.13□□□□□ -0.31
SHCBP1-201ENST00000303383 BOLA2-SMG1P6H3BVE0 249 aa13.13□□□□□ -0.31
SHCBP1-201ENST00000303383 SMUG1Q53HV7 270 aa13.13□□□□□ -0.31
SHCBP1-201ENST00000303383 EMC4Q5J8M3 183 aa13.13□□□□□ -0.31
SHCBP1-201ENST00000303383 SLC35D3Q5M8T2 416 aa13.13□□□□□ -0.31
SHCBP1-201ENST00000303383 PPP1R32Q7Z5V6 425 aa13.13□□□□□ -0.31
SHCBP1-201ENST00000303383 MRGPRX4Q96LA9 322 aa13.13□□□□□ -0.31
SHCBP1-201ENST00000303383 HAO2Q9NYQ3 351 aa13.13□□□□□ -0.31
SHCBP1-201ENST00000303383 SHISA8B8ZZ34 492 aa13.12□□□□□ -0.31
SHCBP1-201ENST00000303383 H7C1C5 153 aa13.12□□□□□ -0.31
SHCBP1-201ENST00000303383 MASP2O00187 686 aa13.12□□□□□ -0.31
SHCBP1-201ENST00000303383 IMPA2O14732 288 aa13.12□□□□□ -0.31
SHCBP1-201ENST00000303383 TRIM3O75382 744 aaPredicted RBP13.12□□□□□ -0.31
SHCBP1-201ENST00000303383 SLC2A5P22732 501 aa13.12□□□□□ -0.31
SHCBP1-201ENST00000303383 PYCR1P32322 319 aa13.12□□□□□ -0.31
SHCBP1-201ENST00000303383 CDKN2AP42771 156 aaKnown RBP13.12□□□□□ -0.31
SHCBP1-201ENST00000303383 LCN6P62502 163 aa13.12□□□□□ -0.31
SHCBP1-201ENST00000303383 TPBGQ13641 420 aa13.12□□□□□ -0.31
SHCBP1-201ENST00000303383 DOC2BQ14184 412 aa13.12□□□□□ -0.31
SHCBP1-201ENST00000303383 SLC22A10Q63ZE4 541 aa13.12□□□□□ -0.31
SHCBP1-201ENST00000303383 GPALPP1Q8IXQ4 340 aa13.12□□□□□ -0.31
SHCBP1-201ENST00000303383 ZNF417Q8TAU3 575 aa13.12□□□□□ -0.31
SHCBP1-201ENST00000303383 SMAP2Q8WU79 429 aaPredicted RBP13.12□□□□□ -0.31
SHCBP1-201ENST00000303383 ZNF587Q96SQ5 575 aaPredicted RBP13.12□□□□□ -0.31
SHCBP1-201ENST00000303383 NUAK2Q9H093 628 aa13.12□□□□□ -0.31
SHCBP1-201ENST00000303383 BABAM2Q9NXR7 383 aa13.12□□□□□ -0.31
SHCBP1-201ENST00000303383 ZNF346Q9UL40 294 aaKnown RBP13.12□□□□□ -0.31
SHCBP1-201ENST00000303383 A0A1W2PRG6 482 aa13.12□□□□□ -0.31
SHCBP1-201ENST00000303383 RUNX1T1Q06455 604 aa13.12□□□□□ -0.31
SHCBP1-201ENST00000303383 SLC35F2Q8IXU6 374 aa13.12□□□□□ -0.31
SHCBP1-201ENST00000303383 OR2T4Q8NH00 348 aa13.12□□□□□ -0.31
SHCBP1-201ENST00000303383 S100ZQ8WXG8 99 aa13.12□□□□□ -0.31
SHCBP1-201ENST00000303383 BORCS5Q969J3 196 aa13.12□□□□□ -0.31
SHCBP1-201ENST00000303383 NXPE2Q96DL1 559 aa13.12□□□□□ -0.31
SHCBP1-201ENST00000303383 TPK1Q9H3S4 243 aa13.12□□□□□ -0.31
SHCBP1-201ENST00000303383 P4HTMQ9NXG6 502 aa13.12□□□□□ -0.31
SHCBP1-201ENST00000303383 ALPK2Q86TB3 2170 aa13.12□□□□□ -0.31
SHCBP1-201ENST00000303383 PRR33A8MZF0 331 aa13.12□□□□□ -0.31
SHCBP1-201ENST00000303383 IDUAP35475 653 aa13.12□□□□□ -0.31
SHCBP1-201ENST00000303383 ACVR1BP36896 505 aa13.12□□□□□ -0.31
SHCBP1-201ENST00000303383 DIO1P49895 249 aa13.12□□□□□ -0.31
SHCBP1-201ENST00000303383 RPS25P62851 125 aaKnown RBP13.12□□□□□ -0.31
SHCBP1-201ENST00000303383 TOMM20Q15388 145 aa13.12□□□□□ -0.31
SHCBP1-201ENST00000303383 INPP5JQ15735 1006 aaPredicted RBP13.12□□□□□ -0.31
SHCBP1-201ENST00000303383 C22orf42Q6IC83 251 aa13.12□□□□□ -0.31
SHCBP1-201ENST00000303383 KCTD7Q96MP8 289 aa13.12□□□□□ -0.31
SHCBP1-201ENST00000303383 TSPAN32Q96QS1 320 aa13.12□□□□□ -0.31
SHCBP1-201ENST00000303383 TM9SF2Q99805 663 aa13.12□□□□□ -0.31
SHCBP1-201ENST00000303383 ALG12Q9BV10 488 aa13.12□□□□□ -0.31
SHCBP1-201ENST00000303383 JAM3Q9BX67 310 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms