RNA–Protein interactions for RNA: ENST00000303296.8

HIPK3-201, Transcript of homeodomain interacting protein kinase 3, humanhuman

TSL 5 BASIC

Gene HIPK3, Length 7,408 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK3-201ENST00000303296 SLC6A20Q9NP91 592 aa13.28□□□□□ -0.28
HIPK3-201ENST00000303296 NXT1Q9UKK6 140 aaKnown RBP13.28□□□□□ -0.28
HIPK3-201ENST00000303296 TMEM265A0A087WTH1 108 aa13.28□□□□□ -0.28
HIPK3-201ENST00000303296 OR2C1O95371 312 aa13.28□□□□□ -0.28
HIPK3-201ENST00000303296 SLC35E2BP0CK96 405 aa13.28□□□□□ -0.28
HIPK3-201ENST00000303296 PTP4A2Q12974 167 aa13.28□□□□□ -0.28
HIPK3-201ENST00000303296 TXNRD3NBQ6F5E7 133 aa13.28□□□□□ -0.28
HIPK3-201ENST00000303296 ADGRG3Q86Y34 549 aa13.28□□□□□ -0.28
HIPK3-201ENST00000303296 SIMC1Q8NDZ2 872 aa13.28□□□□□ -0.28
HIPK3-201ENST00000303296 OR5A2Q8NGI9 324 aa13.28□□□□□ -0.28
HIPK3-201ENST00000303296 NXF2Q9GZY0 626 aaKnown RBP13.28□□□□□ -0.28
HIPK3-201ENST00000303296 TP53P04637 393 aaPredicted RBP13.27□□□□□ -0.28
HIPK3-201ENST00000303296 C5AR1P21730 350 aa13.27□□□□□ -0.28
HIPK3-201ENST00000303296 PPP2CBP62714 309 aa13.27□□□□□ -0.28
HIPK3-201ENST00000303296 ADGRG5Q8IZF4 528 aa13.27□□□□□ -0.28
HIPK3-201ENST00000303296 MED18Q9BUE0 208 aa13.27□□□□□ -0.28
HIPK3-201ENST00000303296 HHLA2Q9UM44 414 aa13.27□□□□□ -0.28
HIPK3-201ENST00000303296 CHD4Q14839 1912 aa13.27□□□□□ -0.28
HIPK3-201ENST00000303296 SLC16A6O15403 523 aa13.27□□□□□ -0.28
HIPK3-201ENST00000303296 HIST2H3AQ71DI3 136 aa13.27□□□□□ -0.28
HIPK3-201ENST00000303296 TIMM9Q9Y5J7 89 aa13.27□□□□□ -0.28
HIPK3-201ENST00000303296 COL5A2P05997 1499 aaPredicted RBP13.27□□□□□ -0.28
HIPK3-201ENST00000303296 H3BQ06 376 aaPredicted RBP13.27□□□□□ -0.29
HIPK3-201ENST00000303296 AREGP15514 252 aa13.27□□□□□ -0.29
HIPK3-201ENST00000303296 NQO2P16083 231 aa13.27□□□□□ -0.29
HIPK3-201ENST00000303296 P2RY2P41231 377 aa13.27□□□□□ -0.29
HIPK3-201ENST00000303296 TBC1D28Q2M2D7 210 aa13.27□□□□□ -0.29
HIPK3-201ENST00000303296 GLYR1Q49A26 553 aaPredicted RBP13.27□□□□□ -0.29
HIPK3-201ENST00000303296 UTP4Q969X6 686 aaKnown RBP13.27□□□□□ -0.29
HIPK3-201ENST00000303296 SORBS1Q9BX66 1292 aaKnown RBP13.27□□□□□ -0.29
HIPK3-201ENST00000303296 XYLT2Q9H1B5 865 aa13.27□□□□□ -0.29
HIPK3-201ENST00000303296 PIGLQ9Y2B2 252 aa13.27□□□□□ -0.29
HIPK3-201ENST00000303296 XKRY2A2RUG3 117 aa13.27□□□□□ -0.29
HIPK3-201ENST00000303296 TMEM97Q5BJF2 176 aa13.27□□□□□ -0.29
HIPK3-201ENST00000303296 DEFB108BQ8NET1 73 aa13.27□□□□□ -0.29
HIPK3-201ENST00000303296 FBXO8Q9NRD0 319 aa13.27□□□□□ -0.29
HIPK3-201ENST00000303296 PGAP2Q9UHJ9 254 aa13.27□□□□□ -0.29
HIPK3-201ENST00000303296 ZNF701M0R085 212 aaPredicted RBP13.27□□□□□ -0.29
HIPK3-201ENST00000303296 PNPLA1Q8N8W4 532 aa13.27□□□□□ -0.29
HIPK3-201ENST00000303296 OR10R2Q8NGX6 335 aa13.27□□□□□ -0.29
HIPK3-201ENST00000303296 ABHD6Q9BV23 337 aa13.27□□□□□ -0.29
HIPK3-201ENST00000303296 SPACA1Q9HBV2 294 aa13.27□□□□□ -0.29
HIPK3-201ENST00000303296 ZBTB32Q9Y2Y4 487 aaPredicted RBP13.27□□□□□ -0.29
HIPK3-201ENST00000303296 ZFAND5O76080 213 aa13.27□□□□□ -0.29
HIPK3-201ENST00000303296 NUDT1P36639 197 aa13.27□□□□□ -0.29
HIPK3-201ENST00000303296 ZNF90Q03938 601 aa13.27□□□□□ -0.29
HIPK3-201ENST00000303296 RUNX3Q13761 415 aa13.27□□□□□ -0.29
HIPK3-201ENST00000303296 H3F3CQ6NXT2 135 aa13.27□□□□□ -0.29
HIPK3-201ENST00000303296 NAGSQ8N159 534 aa13.27□□□□□ -0.29
HIPK3-201ENST00000303296 SEMA6DQ8NFY4 1073 aa13.27□□□□□ -0.29
HIPK3-201ENST00000303296 ANGPTL6Q8NI99 470 aa13.27□□□□□ -0.29
HIPK3-201ENST00000303296 OR6C1Q96RD1 312 aa13.27□□□□□ -0.29
HIPK3-201ENST00000303296 NARFLQ9H6Q4 476 aa13.27□□□□□ -0.29
HIPK3-201ENST00000303296 MED20Q9H944 212 aa13.27□□□□□ -0.29
HIPK3-201ENST00000303296 LRRC10BA6NIK2 292 aa13.26□□□□□ -0.29
HIPK3-201ENST00000303296 VNN1O95497 513 aa13.26□□□□□ -0.29
HIPK3-201ENST00000303296 DDAH2O95865 285 aa13.26□□□□□ -0.29
HIPK3-201ENST00000303296 ELAVL3Q14576 367 aaKnown RBP13.26□□□□□ -0.29
HIPK3-201ENST00000303296 OR5AR1Q8NGP9 310 aa13.26□□□□□ -0.29
HIPK3-201ENST00000303296 FAM124BQ9H5Z6 455 aaPredicted RBP13.26□□□□□ -0.29
HIPK3-201ENST00000303296 C8orf33Q9H7E9 229 aaPredicted RBP13.26□□□□□ -0.29
HIPK3-201ENST00000303296 ZMAT3Q9HA38 289 aaKnown RBP13.26□□□□□ -0.29
HIPK3-201ENST00000303296 ZNF337Q9Y3M9 751 aa13.26□□□□□ -0.29
HIPK3-201ENST00000303296 PRAMEF25A6NGN4 478 aa13.26□□□□□ -0.29
HIPK3-201ENST00000303296 NUDT19A8MXV4 375 aa13.26□□□□□ -0.29
HIPK3-201ENST00000303296 ATXN1LP0C7T5 689 aaKnown RBP13.26□□□□□ -0.29
HIPK3-201ENST00000303296 IL4RP24394 825 aa13.26□□□□□ -0.29
HIPK3-201ENST00000303296 OR1D4P47884 311 aa13.26□□□□□ -0.29
HIPK3-201ENST00000303296 CLDN12P56749 244 aa13.26□□□□□ -0.29
HIPK3-201ENST00000303296 MARCH8Q5T0T0 291 aa13.26□□□□□ -0.29
HIPK3-201ENST00000303296 PRAMEF5Q5TYX0 476 aa13.26□□□□□ -0.29
HIPK3-201ENST00000303296 PRAMEF6Q5VXH4 476 aa13.26□□□□□ -0.29
HIPK3-201ENST00000303296 CISD2Q8N5K1 135 aaKnown RBP13.26□□□□□ -0.29
HIPK3-201ENST00000303296 APIPQ96GX9 242 aa13.26□□□□□ -0.29
HIPK3-201ENST00000303296 ADAMTS10Q9H324 1103 aa13.26□□□□□ -0.29
HIPK3-201ENST00000303296 H7C1C5 153 aa13.26□□□□□ -0.29
HIPK3-201ENST00000303296 CASP3P42574 277 aa13.26□□□□□ -0.29
HIPK3-201ENST00000303296 LCN6P62502 163 aa13.26□□□□□ -0.29
HIPK3-201ENST00000303296 DBPQ10586 325 aaPredicted RBP13.26□□□□□ -0.29
HIPK3-201ENST00000303296 CD300LGQ6UXG3 332 aa13.26□□□□□ -0.29
HIPK3-201ENST00000303296 AAED1Q7RTV5 226 aa13.26□□□□□ -0.29
HIPK3-201ENST00000303296 OR13J1Q8NGT2 312 aa13.26□□□□□ -0.29
HIPK3-201ENST00000303296 OR4F5Q8NH21 305 aa13.26□□□□□ -0.29
HIPK3-201ENST00000303296 NETO1Q8TDF5 533 aa13.26□□□□□ -0.29
HIPK3-201ENST00000303296 OR4F4Q96R69 305 aa13.26□□□□□ -0.29
HIPK3-201ENST00000303296 EGLN1Q9GZT9 426 aa13.26□□□□□ -0.29
HIPK3-201ENST00000303296 ROBO3Q96MS0 1386 aa13.26□□□□□ -0.29
HIPK3-201ENST00000303296 CA12O43570 354 aa13.26□□□□□ -0.29
HIPK3-201ENST00000303296 PDGFAP04085 211 aa13.26□□□□□ -0.29
HIPK3-201ENST00000303296 HNRNPA3P51991 378 aaKnown RBP13.26□□□□□ -0.29
HIPK3-201ENST00000303296 HAGHQ16775 308 aa13.26□□□□□ -0.29
HIPK3-201ENST00000303296 COMMD6Q7Z4G1 85 aa13.26□□□□□ -0.29
HIPK3-201ENST00000303296 SYT9Q86SS6 491 aa13.26□□□□□ -0.29
HIPK3-201ENST00000303296 OR51H1Q8NH63 302 aa13.26□□□□□ -0.29
HIPK3-201ENST00000303296 GAREM1Q9H706 876 aa13.26□□□□□ -0.29
HIPK3-201ENST00000303296 ZNF593O00488 134 aaPredicted RBP13.26□□□□□ -0.29
HIPK3-201ENST00000303296 GPR37O15354 613 aa13.26□□□□□ -0.29
HIPK3-201ENST00000303296 MMP2P08253 660 aa13.26□□□□□ -0.29
HIPK3-201ENST00000303296 SRP14P37108 136 aaKnown RBP13.26□□□□□ -0.29
HIPK3-201ENST00000303296 CASP7P55210 303 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms