RNA–Protein interactions for RNA: ENST00000300302.9

HERPUD1-201, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HERPUD1, Length 1,862 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-201ENST00000300302 BEST3Q8N1M1 668 aa14.19□□□□□ -0.14
HERPUD1-201ENST00000300302 LSM14AQ8ND56 463 aaKnown RBP14.19□□□□□ -0.14
HERPUD1-201ENST00000300302 NPEPL1Q8NDH3 523 aa14.19□□□□□ -0.14
HERPUD1-201ENST00000300302 SLC25A43Q8WUT9 341 aaPredicted RBP14.19□□□□□ -0.14
HERPUD1-201ENST00000300302 RASD2Q96D21 266 aa14.19□□□□□ -0.14
HERPUD1-201ENST00000300302 DNAJA3Q96EY1 480 aa14.19□□□□□ -0.14
HERPUD1-201ENST00000300302 TMEM41AQ96HV5 264 aa14.19□□□□□ -0.14
HERPUD1-201ENST00000300302 Q96M85 177 aa14.19□□□□□ -0.14
HERPUD1-201ENST00000300302 NMNAT3Q96T66 252 aa14.19□□□□□ -0.14
HERPUD1-201ENST00000300302 INIPQ9NRY2 104 aa14.19□□□□□ -0.14
HERPUD1-201ENST00000300302 SACM1LQ9NTJ5 587 aa14.19□□□□□ -0.14
HERPUD1-201ENST00000300302 HAO2Q9NYQ3 351 aa14.19□□□□□ -0.14
HERPUD1-201ENST00000300302 TAS2R5Q9NYW4 299 aa14.19□□□□□ -0.14
HERPUD1-201ENST00000300302 PCSK5Q92824 1860 aa14.19□□□□□ -0.14
HERPUD1-201ENST00000300302 ZFHX2Q9C0A1 2572 aaPredicted RBP14.19□□□□□ -0.14
HERPUD1-201ENST00000300302 CCDC182A6NF36 153 aa14.18□□□□□ -0.14
HERPUD1-201ENST00000300302 FTCDNL1E5RQL4 147 aa14.18□□□□□ -0.14
HERPUD1-201ENST00000300302 CCRL2O00421 344 aa14.18□□□□□ -0.14
HERPUD1-201ENST00000300302 SLC22A1O15245 554 aa14.18□□□□□ -0.14
HERPUD1-201ENST00000300302 RNF13O43567 381 aa14.18□□□□□ -0.14
HERPUD1-201ENST00000300302 SERPINI2O75830 405 aa14.18□□□□□ -0.14
HERPUD1-201ENST00000300302 DXOO77932 396 aaKnown RBP14.18□□□□□ -0.14
HERPUD1-201ENST00000300302 SCG5P05408 212 aa14.18□□□□□ -0.14
HERPUD1-201ENST00000300302 LIFP15018 202 aa14.18□□□□□ -0.14
HERPUD1-201ENST00000300302 AHCYP23526 432 aa14.18□□□□□ -0.14
HERPUD1-201ENST00000300302 IDUAP35475 653 aa14.18□□□□□ -0.14
HERPUD1-201ENST00000300302 CASRP41180 1078 aa14.18□□□□□ -0.14
HERPUD1-201ENST00000300302 DSCR4P56555 118 aaPredicted RBP14.18□□□□□ -0.14
HERPUD1-201ENST00000300302 WNT4P56705 351 aa14.18□□□□□ -0.14
HERPUD1-201ENST00000300302 CTF1Q16619 201 aa14.18□□□□□ -0.14
HERPUD1-201ENST00000300302 ABHD17BQ5VST6 288 aa14.18□□□□□ -0.14
HERPUD1-201ENST00000300302 MDGA2Q7Z553 956 aa14.18□□□□□ -0.14
HERPUD1-201ENST00000300302 SCAIQ8N9R8 606 aa14.18□□□□□ -0.14
HERPUD1-201ENST00000300302 CLEC1AQ8NC01 280 aa14.18□□□□□ -0.14
HERPUD1-201ENST00000300302 ATP6V1C2Q8NEY4 427 aa14.18□□□□□ -0.14
HERPUD1-201ENST00000300302 POC1BQ8TC44 478 aa14.18□□□□□ -0.14
HERPUD1-201ENST00000300302 KISS1RQ969F8 398 aaPredicted RBP14.18□□□□□ -0.14
HERPUD1-201ENST00000300302 JSRP1Q96MG2 331 aaPredicted RBP14.18□□□□□ -0.14
HERPUD1-201ENST00000300302 PROK2Q9HC23 129 aa14.18□□□□□ -0.14
HERPUD1-201ENST00000300302 ASCL3Q9NQ33 180 aa14.18□□□□□ -0.14
HERPUD1-201ENST00000300302 INPP5EQ9NRR6 644 aa14.18□□□□□ -0.14
HERPUD1-201ENST00000300302 ANKRD10Q9NXR5 420 aa14.18□□□□□ -0.14
HERPUD1-201ENST00000300302 SHISA8B8ZZ34 492 aa14.18□□□□□ -0.14
HERPUD1-201ENST00000300302 CBR3O75828 277 aa14.18□□□□□ -0.14
HERPUD1-201ENST00000300302 CLUP10909 449 aa14.18□□□□□ -0.14
HERPUD1-201ENST00000300302 LIPCP11150 499 aa14.18□□□□□ -0.14
HERPUD1-201ENST00000300302 ITGA3P26006 1051 aa14.18□□□□□ -0.14
HERPUD1-201ENST00000300302 DPP4P27487 766 aa14.18□□□□□ -0.14
HERPUD1-201ENST00000300302 OC90Q02509 493 aaPredicted RBP14.18□□□□□ -0.14
HERPUD1-201ENST00000300302 MLLT11Q13015 90 aaPredicted RBP14.18□□□□□ -0.14
HERPUD1-201ENST00000300302 SELENBP1Q13228 472 aa14.18□□□□□ -0.14
HERPUD1-201ENST00000300302 PON3Q15166 354 aa14.18□□□□□ -0.14
HERPUD1-201ENST00000300302 SLC35D3Q5M8T2 416 aa14.18□□□□□ -0.14
HERPUD1-201ENST00000300302 TIGD3Q6B0B8 471 aa14.18□□□□□ -0.14
HERPUD1-201ENST00000300302 LEG1Q6P5S2 330 aa14.18□□□□□ -0.14
HERPUD1-201ENST00000300302 PAQR6Q6TCH4 344 aa14.18□□□□□ -0.14
HERPUD1-201ENST00000300302 TMPRSS7Q7RTY8 843 aa14.18□□□□□ -0.14
HERPUD1-201ENST00000300302 ACBD7Q8N6N7 88 aa14.18□□□□□ -0.14
HERPUD1-201ENST00000300302 ZNF248Q8NDW4 579 aa14.18□□□□□ -0.14
HERPUD1-201ENST00000300302 OR9Q1Q8NGQ5 310 aa14.18□□□□□ -0.14
HERPUD1-201ENST00000300302 ZNF417Q8TAU3 575 aa14.18□□□□□ -0.14
HERPUD1-201ENST00000300302 ARL5BQ96KC2 179 aa14.18□□□□□ -0.14
HERPUD1-201ENST00000300302 TSPAN32Q96QS1 320 aa14.18□□□□□ -0.14
HERPUD1-201ENST00000300302 ZNF587Q96SQ5 575 aaPredicted RBP14.18□□□□□ -0.14
HERPUD1-201ENST00000300302 DCUN1D5Q9BTE7 237 aa14.18□□□□□ -0.14
HERPUD1-201ENST00000300302 DLL3Q9NYJ7 618 aa14.18□□□□□ -0.14
HERPUD1-201ENST00000300302 CDV3Q9UKY7 258 aaKnown RBP14.18□□□□□ -0.14
HERPUD1-201ENST00000300302 A0A1W2PPW3 197 aa14.17□□□□□ -0.14
HERPUD1-201ENST00000300302 C11orf98E9PRG8 122 aa14.17□□□□□ -0.14
HERPUD1-201ENST00000300302 H3BML4 177 aa14.17□□□□□ -0.14
HERPUD1-201ENST00000300302 J3QRE1 110 aa14.17□□□□□ -0.14
HERPUD1-201ENST00000300302 PLPP3O14495 311 aa14.17□□□□□ -0.14
HERPUD1-201ENST00000300302 GYPBP06028 91 aa14.17□□□□□ -0.14
HERPUD1-201ENST00000300302 LIMS3P0CW19 117 aa14.17□□□□□ -0.14
HERPUD1-201ENST00000300302 LIMS4P0CW20 117 aa14.17□□□□□ -0.14
HERPUD1-201ENST00000300302 NR4A1P22736 598 aa14.17□□□□□ -0.14
HERPUD1-201ENST00000300302 CLK1P49759 484 aaKnown RBP14.17□□□□□ -0.14
HERPUD1-201ENST00000300302 NFATC3Q12968 1075 aa14.17□□□□□ -0.14
HERPUD1-201ENST00000300302 KRR1Q13601 381 aaKnown RBP14.17□□□□□ -0.14
HERPUD1-201ENST00000300302 OR7A5Q15622 319 aa14.17□□□□□ -0.14
HERPUD1-201ENST00000300302 TSTQ16762 297 aaKnown RBP14.17□□□□□ -0.14
HERPUD1-201ENST00000300302 TIMM50Q3ZCQ8 353 aa14.17□□□□□ -0.14
HERPUD1-201ENST00000300302 B3GLCTQ6Y288 498 aa14.17□□□□□ -0.14
HERPUD1-201ENST00000300302 LHFPL3Q86UP9 236 aa14.17□□□□□ -0.14
HERPUD1-201ENST00000300302 KLHL36Q8N4N3 616 aa14.17□□□□□ -0.14
HERPUD1-201ENST00000300302 GNRHR2Q96P88 292 aa14.17□□□□□ -0.14
HERPUD1-201ENST00000300302 OPALINQ96PE5 141 aa14.17□□□□□ -0.14
HERPUD1-201ENST00000300302 DDOQ99489 341 aa14.17□□□□□ -0.14
HERPUD1-201ENST00000300302 ERVK13-1Q9NX77 482 aa14.17□□□□□ -0.14
HERPUD1-201ENST00000300302 DKKL1Q9UK85 242 aa14.17□□□□□ -0.14
HERPUD1-201ENST00000300302 CPAMD8Q8IZJ3 1885 aa14.17□□□□□ -0.14
HERPUD1-201ENST00000300302 OR6C68A6NDL8 312 aa14.16□□□□□ -0.14
HERPUD1-201ENST00000300302 G3V3Y1 287 aa14.16□□□□□ -0.14
HERPUD1-201ENST00000300302 XKRYO14609 159 aa14.16□□□□□ -0.14
HERPUD1-201ENST00000300302 AIREO43918 545 aa14.16□□□□□ -0.14
HERPUD1-201ENST00000300302 TRIM3O75382 744 aaPredicted RBP14.16□□□□□ -0.14
HERPUD1-201ENST00000300302 RENP00797 406 aa14.16□□□□□ -0.14
HERPUD1-201ENST00000300302 SBK2P0C263 348 aa14.16□□□□□ -0.14
HERPUD1-201ENST00000300302 TCEA1P23193 301 aaKnown RBP14.16□□□□□ -0.14
HERPUD1-201ENST00000300302 CDKN2AP42771 156 aaKnown RBP14.16□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 133.1 ms