RNA–Protein interactions for RNA: ENST00000298396.6

SSX3-201, Transcript of SSX family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSX3, Length 1,232 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX3-201ENST00000298396 NUP107P57740 925 aa5.26□□□□□ -1.57
SSX3-201ENST00000298396 TAS2R41P59536 307 aa5.26□□□□□ -1.57
SSX3-201ENST00000298396 ACTR3P61158 418 aa5.26□□□□□ -1.57
SSX3-201ENST00000298396 COPZ1P61923 177 aa5.26□□□□□ -1.57
SSX3-201ENST00000298396 H3F3AP84243 136 aa5.26□□□□□ -1.57
SSX3-201ENST00000298396 TEKQ02763 1124 aa5.26□□□□□ -1.57
SSX3-201ENST00000298396 PPP1R8Q12972 351 aaKnown RBP5.26□□□□□ -1.57
SSX3-201ENST00000298396 GUSBP1Q15486 140 aa5.26□□□□□ -1.57
SSX3-201ENST00000298396 C1orf185Q5T7R7 199 aa5.26□□□□□ -1.57
SSX3-201ENST00000298396 WLSQ5T9L3 541 aa5.26□□□□□ -1.57
SSX3-201ENST00000298396 C1orf140Q5VVS0 124 aa5.26□□□□□ -1.57
SSX3-201ENST00000298396 HBMQ6B0K9 141 aa5.26□□□□□ -1.57
SSX3-201ENST00000298396 ABLIM2Q6H8Q1 611 aa5.26□□□□□ -1.57
SSX3-201ENST00000298396 HMBOX1Q6NT76 420 aa5.26□□□□□ -1.57
SSX3-201ENST00000298396 PODNL1Q6PEZ8 512 aa5.26□□□□□ -1.57
SSX3-201ENST00000298396 NHLRC1Q6VVB1 395 aa5.26□□□□□ -1.57
SSX3-201ENST00000298396 TMPPEQ6ZT21 453 aa5.26□□□□□ -1.57
SSX3-201ENST00000298396 ESPNLQ6ZVH7 1005 aa5.26□□□□□ -1.57
SSX3-201ENST00000298396 SPATA24Q86W54 205 aa5.26□□□□□ -1.57
SSX3-201ENST00000298396 LRRC17Q8N6Y2 441 aa5.26□□□□□ -1.57
SSX3-201ENST00000298396 OR52J3Q8NH60 311 aa5.26□□□□□ -1.57
SSX3-201ENST00000298396 FNDC9Q8TBE3 224 aa5.26□□□□□ -1.57
SSX3-201ENST00000298396 SLC7A13Q8TCU3 470 aa5.26□□□□□ -1.57
SSX3-201ENST00000298396 ZPLD1Q8TCW7 415 aa5.26□□□□□ -1.57
SSX3-201ENST00000298396 SLC25A43Q8WUT9 341 aaPredicted RBP5.26□□□□□ -1.57
SSX3-201ENST00000298396 ROBO4Q8WZ75 1007 aa5.26□□□□□ -1.57
SSX3-201ENST00000298396 OSTF1Q92882 214 aa5.26□□□□□ -1.57
SSX3-201ENST00000298396 UBE2FQ969M7 185 aa5.26□□□□□ -1.57
SSX3-201ENST00000298396 OR5B2Q96R09 309 aa5.26□□□□□ -1.57
SSX3-201ENST00000298396 PIP5K1AQ99755 562 aa5.26□□□□□ -1.57
SSX3-201ENST00000298396 GPA33Q99795 319 aa5.26□□□□□ -1.57
SSX3-201ENST00000298396 TMEM43Q9BTV4 400 aa5.26□□□□□ -1.57
SSX3-201ENST00000298396 POTEKPQ9BYX7 375 aa5.26□□□□□ -1.57
SSX3-201ENST00000298396 POLR2J2Q9GZM3 115 aaKnown RBP5.26□□□□□ -1.57
SSX3-201ENST00000298396 POLR2J3Q9H1A7 115 aaKnown RBP5.26□□□□□ -1.57
SSX3-201ENST00000298396 NTN4Q9HB63 628 aa5.26□□□□□ -1.57
SSX3-201ENST00000298396 CCM2LQ9NUG4 571 aaPredicted RBP5.26□□□□□ -1.57
SSX3-201ENST00000298396 RPS6KB2Q9UBS0 482 aa5.26□□□□□ -1.57
SSX3-201ENST00000298396 ERRFI1Q9UJM3 462 aaPredicted RBP5.26□□□□□ -1.57
SSX3-201ENST00000298396 PRDM4Q9UKN5 801 aa5.26□□□□□ -1.57
SSX3-201ENST00000298396 MEMO1Q9Y316 297 aa5.26□□□□□ -1.57
SSX3-201ENST00000298396 TESMINQ9Y4I5 508 aa5.26□□□□□ -1.57
SSX3-201ENST00000298396 LYVE1Q9Y5Y7 322 aa5.26□□□□□ -1.57
SSX3-201ENST00000298396 CENPEQ02224 2701 aa5.26□□□□□ -1.57
SSX3-201ENST00000298396 AKAP6Q13023 2319 aa5.25□□□□□ -1.57
SSX3-201ENST00000298396 TRAV36DV7A0A075B6V5 113 aa5.25□□□□□ -1.57
SSX3-201ENST00000298396 TRGV8A0A0C4DH27 118 aa5.25□□□□□ -1.57
SSX3-201ENST00000298396 A0A0G2JNJ9 132 aa5.25□□□□□ -1.57
SSX3-201ENST00000298396 A0A1W2PRQ8 180 aa5.25□□□□□ -1.57
SSX3-201ENST00000298396 SH3PXD2BA1X283 911 aa5.25□□□□□ -1.57
SSX3-201ENST00000298396 MBD3L4A6NDZ8 208 aaPredicted RBP5.25□□□□□ -1.57
SSX3-201ENST00000298396 MBD3L3A6NE82 208 aaPredicted RBP5.25□□□□□ -1.57
SSX3-201ENST00000298396 MBD3L5A6NJ08 208 aaPredicted RBP5.25□□□□□ -1.57
SSX3-201ENST00000298396 CD8B2A6NJW9 211 aa5.25□□□□□ -1.57
SSX3-201ENST00000298396 ENO4A6NNW6 628 aa5.25□□□□□ -1.57
SSX3-201ENST00000298396 ZNF716A6NP11 495 aa5.25□□□□□ -1.57
SSX3-201ENST00000298396 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.25□□□□□ -1.57
SSX3-201ENST00000298396 AHRRA9YTQ3 701 aa5.25□□□□□ -1.57
SSX3-201ENST00000298396 E9PLN8 166 aa5.25□□□□□ -1.57
SSX3-201ENST00000298396 MS4A18H0YCH9 400 aa5.25□□□□□ -1.57
SSX3-201ENST00000298396 SULT2B1O00204 365 aa5.25□□□□□ -1.57
SSX3-201ENST00000298396 CDC42EP2O14613 210 aa5.25□□□□□ -1.57
SSX3-201ENST00000298396 WDR1O75083 606 aa5.25□□□□□ -1.57
SSX3-201ENST00000298396 ENTPD5O75356 428 aa5.25□□□□□ -1.57
SSX3-201ENST00000298396 TIPRLO75663 272 aa5.25□□□□□ -1.57
SSX3-201ENST00000298396 AKR7A3O95154 331 aa5.25□□□□□ -1.57
SSX3-201ENST00000298396 GPIP06744 558 aa5.25□□□□□ -1.57
SSX3-201ENST00000298396 H1F0P07305 194 aaKnown RBP5.25□□□□□ -1.57
SSX3-201ENST00000298396 TSPAN19P0C672 248 aa5.25□□□□□ -1.57
SSX3-201ENST00000298396 RAP2AP10114 183 aa5.25□□□□□ -1.57
SSX3-201ENST00000298396 TFPIP10646 304 aa5.25□□□□□ -1.57
SSX3-201ENST00000298396 THRBP10828 461 aa5.25□□□□□ -1.57
SSX3-201ENST00000298396 PNMTP11086 282 aa5.25□□□□□ -1.57
SSX3-201ENST00000298396 UMPSP11172 480 aa5.25□□□□□ -1.57
SSX3-201ENST00000298396 CBLP22681 906 aa5.25□□□□□ -1.57
SSX3-201ENST00000298396 GRPRP30550 384 aa5.25□□□□□ -1.57
SSX3-201ENST00000298396 SLC7A1P30825 629 aa5.25□□□□□ -1.57
SSX3-201ENST00000298396 RRM2P31350 389 aa5.25□□□□□ -1.57
SSX3-201ENST00000298396 CEACAM8P31997 349 aaPredicted RBP5.25□□□□□ -1.57
SSX3-201ENST00000298396 IDUAP35475 653 aa5.25□□□□□ -1.57
SSX3-201ENST00000298396 RBM34P42696 430 aaKnown RBP5.25□□□□□ -1.57
SSX3-201ENST00000298396 RPS5P46782 204 aaKnown RBP5.25□□□□□ -1.57
SSX3-201ENST00000298396 CLK1P49759 484 aaKnown RBP5.25□□□□□ -1.57
SSX3-201ENST00000298396 AGFG1P52594 562 aaKnown RBP5.25□□□□□ -1.57
SSX3-201ENST00000298396 HMGA2P52926 109 aa5.25□□□□□ -1.57
SSX3-201ENST00000298396 CARD18P57730 90 aa5.25□□□□□ -1.57
SSX3-201ENST00000298396 FXYD6P3P58550 94 aa5.25□□□□□ -1.57
SSX3-201ENST00000298396 RAC3P60763 192 aa5.25□□□□□ -1.57
SSX3-201ENST00000298396 SPIBQ01892 262 aa5.25□□□□□ -1.57
SSX3-201ENST00000298396 CHRNB3Q05901 458 aa5.25□□□□□ -1.57
SSX3-201ENST00000298396 FOXF2Q12947 444 aa5.25□□□□□ -1.57
SSX3-201ENST00000298396 DGCR6Q14129 220 aa5.25□□□□□ -1.57
SSX3-201ENST00000298396 TRAM2Q15035 370 aa5.25□□□□□ -1.57
SSX3-201ENST00000298396 PON3Q15166 354 aa5.25□□□□□ -1.57
SSX3-201ENST00000298396 OR7A5Q15622 319 aa5.25□□□□□ -1.57
SSX3-201ENST00000298396 ZNF74Q16587 644 aa5.25□□□□□ -1.57
SSX3-201ENST00000298396 EXOC3L2Q2M3D2 409 aa5.25□□□□□ -1.57
SSX3-201ENST00000298396 MS4A18Q3C1V0 323 aa5.25□□□□□ -1.57
SSX3-201ENST00000298396 C1orf146Q5VVC0 180 aa5.25□□□□□ -1.57
SSX3-201ENST00000298396 NSUN5P2Q63ZY6 315 aa5.25□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms