RNA–Protein interactions for RNA: ENST00000298173.7

GTF2A1-201, Transcript of general transcription factor IIA subunit 1, humanhuman

TSL 2

Gene GTF2A1, Length 1,677 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1-201ENST00000298173 SMNDC1O75940 238 aaKnown RBP eCLIP22.11■■□□□ 1.132e-20■■■■□ 25.4
GTF2A1-201ENST00000298173 F13BP05160 661 aa22.11■■□□□ 1.13
GTF2A1-201ENST00000298173 ADORA3P0DMS8 318 aa22.11■■□□□ 1.13
GTF2A1-201ENST00000298173 HOXD11P31277 338 aaPredicted RBP22.11■■□□□ 1.13
GTF2A1-201ENST00000298173 MLLT10P55197 1068 aa22.11■■□□□ 1.13
GTF2A1-201ENST00000298173 CTXN1P60606 82 aa22.11■■□□□ 1.13
GTF2A1-201ENST00000298173 Q6ZS92 163 aa22.11■■□□□ 1.13
GTF2A1-201ENST00000298173 GGNQ86UU5 652 aa22.11■■□□□ 1.13
GTF2A1-201ENST00000298173 FAM109AQ8N4B1 249 aa22.11■■□□□ 1.13
GTF2A1-201ENST00000298173 ZDHHC11Q9H8X9 412 aa22.11■■□□□ 1.13
GTF2A1-201ENST00000298173 CHST11Q9NPF2 352 aa22.11■■□□□ 1.13
GTF2A1-201ENST00000298173 CLN6Q9NWW5 311 aa22.11■■□□□ 1.13
GTF2A1-201ENST00000298173 GPR52Q9Y2T5 361 aa22.11■■□□□ 1.13
GTF2A1-201ENST00000298173 SLC6A5Q9Y345 797 aa22.11■■□□□ 1.13
GTF2A1-201ENST00000298173 NCOR2Q9Y618 2525 aa22.1■■□□□ 1.13
GTF2A1-201ENST00000298173 MKRN2OSH3BPM6 223 aa22.1■■□□□ 1.13
GTF2A1-201ENST00000298173 K7EM74 188 aa22.1■■□□□ 1.13
GTF2A1-201ENST00000298173 IMPA2O14732 288 aa22.1■■□□□ 1.13
GTF2A1-201ENST00000298173 ENTPD6O75354 484 aa22.1■■□□□ 1.13
GTF2A1-201ENST00000298173 TXNDC12O95881 172 aa22.1■■□□□ 1.13
GTF2A1-201ENST00000298173 P2RY4P51582 365 aa22.1■■□□□ 1.13
GTF2A1-201ENST00000298173 ERVK-25P63136 954 aa22.1■■□□□ 1.13
GTF2A1-201ENST00000298173 H3F3AP84243 136 aa22.1■■□□□ 1.13
GTF2A1-201ENST00000298173 SLC10A1Q14973 349 aa22.1■■□□□ 1.13
GTF2A1-201ENST00000298173 MEDAGQ5VYS4 303 aa22.1■■□□□ 1.13
GTF2A1-201ENST00000298173 ARHGAP11AQ6P4F7 1023 aa22.1■■□□□ 1.13
GTF2A1-201ENST00000298173 ADPRHL1Q8NDY3 354 aa22.1■■□□□ 1.13
GTF2A1-201ENST00000298173 LRR1Q96L50 414 aa22.1■■□□□ 1.13
GTF2A1-201ENST00000298173 KLHL15Q96M94 604 aa22.1■■□□□ 1.13
GTF2A1-201ENST00000298173 Q96MT0 163 aa22.1■■□□□ 1.13
GTF2A1-201ENST00000298173 DDOQ99489 341 aa22.1■■□□□ 1.13
GTF2A1-201ENST00000298173 FN3KQ9H479 309 aa22.1■■□□□ 1.13
GTF2A1-201ENST00000298173 DUSP21Q9H596 190 aa22.1■■□□□ 1.13
GTF2A1-201ENST00000298173 EIF4E1BA6NMX2 242 aaKnown RBP22.09■■□□□ 1.13
GTF2A1-201ENST00000298173 SULT2B1O00204 365 aa22.09■■□□□ 1.13
GTF2A1-201ENST00000298173 AKR7A3O95154 331 aa22.09■■□□□ 1.13
GTF2A1-201ENST00000298173 CLDN20P56880 219 aa22.09■■□□□ 1.13
GTF2A1-201ENST00000298173 OR2B6P58173 313 aa22.09■■□□□ 1.13
GTF2A1-201ENST00000298173 SLC35A1P78382 337 aa22.09■■□□□ 1.13
GTF2A1-201ENST00000298173 AADACL4Q5VUY2 407 aa22.09■■□□□ 1.13
GTF2A1-201ENST00000298173 BCDIN3DQ7Z5W3 292 aaKnown RBP22.09■■□□□ 1.13
GTF2A1-201ENST00000298173 ADGRG7Q96K78 797 aa22.09■■□□□ 1.13
GTF2A1-201ENST00000298173 IGF2RP11717 2491 aa22.09■■□□□ 1.13
GTF2A1-201ENST00000298173 ACOT7O00154 380 aa22.08■■□□□ 1.13
GTF2A1-201ENST00000298173 HIST1H1CP16403 213 aaKnown RBP22.08■■□□□ 1.13
GTF2A1-201ENST00000298173 GTF2E2P29084 291 aaKnown RBP22.08■■□□□ 1.13
GTF2A1-201ENST00000298173 NOS3P29474 1203 aa22.08■■□□□ 1.13
GTF2A1-201ENST00000298173 STARP49675 285 aa22.08■■□□□ 1.13
GTF2A1-201ENST00000298173 CLDN15P56746 228 aa22.08■■□□□ 1.13
GTF2A1-201ENST00000298173 PUDPQ08623 228 aa22.08■■□□□ 1.13
GTF2A1-201ENST00000298173 ZNF169Q14929 603 aaPredicted RBP22.08■■□□□ 1.13
GTF2A1-201ENST00000298173 UNQ6494/PRO21346Q6UXR6 183 aa22.08■■□□□ 1.13
GTF2A1-201ENST00000298173 NHLRC1Q6VVB1 395 aa22.08■■□□□ 1.13
GTF2A1-201ENST00000298173 RBMXL3Q8N7X1 1067 aaKnown RBP22.08■■□□□ 1.13
GTF2A1-201ENST00000298173 TMEM99Q8N816 258 aa22.08■■□□□ 1.13
GTF2A1-201ENST00000298173 FAM98AQ8NCA5 519 aaKnown RBP22.08■■□□□ 1.13
GTF2A1-201ENST00000298173 PTP4A1Q93096 173 aa22.08■■□□□ 1.13
GTF2A1-201ENST00000298173 PLEKHA8Q96JA3 519 aa22.08■■□□□ 1.13
GTF2A1-201ENST00000298173 ZNF582Q96NG8 517 aaPredicted RBP22.08■■□□□ 1.13
GTF2A1-201ENST00000298173 NDEL1Q9GZM8 345 aa22.08■■□□□ 1.13
GTF2A1-201ENST00000298173 HINT3Q9NQE9 182 aaKnown RBP22.08■■□□□ 1.13
GTF2A1-201ENST00000298173 INIPQ9NRY2 104 aa22.08■■□□□ 1.13
GTF2A1-201ENST00000298173 PAK1IP1Q9NWT1 392 aaPredicted RBP22.08■■□□□ 1.13
GTF2A1-201ENST00000298173 ANKRD11Q6UB99 2663 aaPredicted RBP22.08■■□□□ 1.13
GTF2A1-201ENST00000298173 ZNF407Q9C0G0 2248 aa22.08■■□□□ 1.13
GTF2A1-201ENST00000298173 ALPK2Q86TB3 2170 aa22.08■■□□□ 1.13
GTF2A1-201ENST00000298173 KDM4EB2RXH2 506 aaPredicted RBP22.07■■□□□ 1.12
GTF2A1-201ENST00000298173 RNF13O43567 381 aa22.07■■□□□ 1.12
GTF2A1-201ENST00000298173 OR6A2O95222 327 aa22.07■■□□□ 1.12
GTF2A1-201ENST00000298173 SMIM18P0DKX4 95 aa22.07■■□□□ 1.12
GTF2A1-201ENST00000298173 SUCLG1P53597 346 aaKnown RBP22.07■■□□□ 1.12
GTF2A1-201ENST00000298173 SLC35A2P78381 396 aa22.07■■□□□ 1.12
GTF2A1-201ENST00000298173 ESPNLQ6ZVH7 1005 aa22.07■■□□□ 1.12
GTF2A1-201ENST00000298173 ANKK1Q8NFD2 765 aa22.07■■□□□ 1.12
GTF2A1-201ENST00000298173 SMPDL3BQ92485 455 aa22.07■■□□□ 1.12
GTF2A1-201ENST00000298173 ABHD17AQ96GS6 310 aa22.07■■□□□ 1.12
GTF2A1-201ENST00000298173 Q96M85 177 aa22.07■■□□□ 1.12
GTF2A1-201ENST00000298173 AMBNQ9NP70 447 aa22.07■■□□□ 1.12
GTF2A1-201ENST00000298173 FKBP14Q9NWM8 211 aa22.07■■□□□ 1.12
GTF2A1-201ENST00000298173 DNAJC27Q9NZQ0 273 aa22.07■■□□□ 1.12
GTF2A1-201ENST00000298173 BLOC1S6Q9UL45 172 aa22.07■■□□□ 1.12
GTF2A1-201ENST00000298173 TPRKBQ9Y3C4 175 aa22.07■■□□□ 1.12
GTF2A1-201ENST00000298173 DNAJC13O75165 2243 aa22.07■■□□□ 1.12
GTF2A1-201ENST00000298173 KIAA1549Q9HCM3 1950 aa22.07■■□□□ 1.12
GTF2A1-201ENST00000298173 C11orf98E9PRG8 122 aa22.07■■□□□ 1.12
GTF2A1-201ENST00000298173 H0YC42 278 aa22.07■■□□□ 1.12
GTF2A1-201ENST00000298173 AHCYP23526 432 aa22.07■■□□□ 1.12
GTF2A1-201ENST00000298173 SDHAP31040 664 aa22.07■■□□□ 1.12
GTF2A1-201ENST00000298173 GABARAPL2P60520 117 aa22.07■■□□□ 1.12
GTF2A1-201ENST00000298173 PMP22Q01453 160 aa22.07■■□□□ 1.12
GTF2A1-201ENST00000298173 ITGADQ13349 1161 aa22.07■■□□□ 1.12
GTF2A1-201ENST00000298173 EMC4Q5J8M3 183 aa22.07■■□□□ 1.12
GTF2A1-201ENST00000298173 PAQR6Q6TCH4 344 aa22.07■■□□□ 1.12
GTF2A1-201ENST00000298173 ASB18Q6ZVZ8 466 aa22.07■■□□□ 1.12
GTF2A1-201ENST00000298173 TRILQ7L0X0 811 aa22.07■■□□□ 1.12
GTF2A1-201ENST00000298173 CPOQ8IVL8 374 aa22.07■■□□□ 1.12
GTF2A1-201ENST00000298173 KDM8Q8N371 416 aa22.07■■□□□ 1.12
GTF2A1-201ENST00000298173 TSPAN14Q8NG11 270 aa22.07■■□□□ 1.12
GTF2A1-201ENST00000298173 SGCDQ92629 289 aa22.07■■□□□ 1.12
GTF2A1-201ENST00000298173 EXTL1Q92935 676 aa22.07■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms