RNA–Protein interactions for RNA: ENST00000292510.5

VPS28-201, Transcript of VPS28, ESCRT-I subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS28, Length 979 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS28-201ENST00000292510 EPXP11678 715 aa11.81□□□□□ -0.52
VPS28-201ENST00000292510 HLA-DOBP13765 273 aa11.81□□□□□ -0.52
VPS28-201ENST00000292510 ATP6V1B2P21281 511 aa11.81□□□□□ -0.52
VPS28-201ENST00000292510 IGHV1-2P23083 117 aa11.81□□□□□ -0.52
VPS28-201ENST00000292510 SSTR2P30874 369 aa11.81□□□□□ -0.52
VPS28-201ENST00000292510 PCYT1AP49585 367 aa11.81□□□□□ -0.52
VPS28-201ENST00000292510 SELENOPP49908 381 aa11.81□□□□□ -0.52
VPS28-201ENST00000292510 FOXG1P55316 489 aaPredicted RBP11.81□□□□□ -0.52
VPS28-201ENST00000292510 ST3GAL3Q11203 375 aa11.81□□□□□ -0.52
VPS28-201ENST00000292510 PMS2P3Q13401 168 aa11.81□□□□□ -0.52
VPS28-201ENST00000292510 MFSD13AQ14CX5 517 aa11.81□□□□□ -0.52
VPS28-201ENST00000292510 POU4F3Q15319 338 aa11.81□□□□□ -0.52
VPS28-201ENST00000292510 MS4A18Q3C1V0 323 aa11.81□□□□□ -0.52
VPS28-201ENST00000292510 TSPO2Q5TGU0 170 aa11.81□□□□□ -0.52
VPS28-201ENST00000292510 FBXW9Q5XUX1 488 aa11.81□□□□□ -0.52
VPS28-201ENST00000292510 CYP2R1Q6VVX0 501 aa11.81□□□□□ -0.52
VPS28-201ENST00000292510 AAED1Q7RTV5 226 aa11.81□□□□□ -0.52
VPS28-201ENST00000292510 SLC46A3Q7Z3Q1 461 aa11.81□□□□□ -0.52
VPS28-201ENST00000292510 UBE2J2Q8N2K1 259 aa11.81□□□□□ -0.52
VPS28-201ENST00000292510 TMEM239Q8WW34 195 aa11.81□□□□□ -0.52
VPS28-201ENST00000292510 TMEM45BQ96B21 275 aa11.81□□□□□ -0.52
VPS28-201ENST00000292510 DACH2Q96NX9 599 aa11.81□□□□□ -0.52
VPS28-201ENST00000292510 FNDC11Q9BVV2 318 aa11.81□□□□□ -0.52
VPS28-201ENST00000292510 ASPNQ9BXN1 380 aa11.81□□□□□ -0.52
VPS28-201ENST00000292510 ACTR6Q9GZN1 396 aa11.81□□□□□ -0.52
VPS28-201ENST00000292510 SLC24A3Q9HC58 644 aa11.81□□□□□ -0.52
VPS28-201ENST00000292510 MAN2C1Q9NTJ4 1040 aa11.81□□□□□ -0.52
VPS28-201ENST00000292510 C20orf141Q9NUB4 165 aa11.81□□□□□ -0.52
VPS28-201ENST00000292510 NDRG3Q9UGV2 375 aa11.81□□□□□ -0.52
VPS28-201ENST00000292510 B3GALT5Q9Y2C3 310 aa11.81□□□□□ -0.52
VPS28-201ENST00000292510 CORINQ9Y5Q5 1042 aa11.81□□□□□ -0.52
VPS28-201ENST00000292510 ENPP4Q9Y6X5 453 aa11.81□□□□□ -0.52
VPS28-201ENST00000292510 A6NNC1 897 aa11.8□□□□□ -0.52
VPS28-201ENST00000292510 C11orf98E9PRG8 122 aa11.8□□□□□ -0.52
VPS28-201ENST00000292510 PLPP3O14495 311 aa11.8□□□□□ -0.52
VPS28-201ENST00000292510 SERPINI2O75830 405 aa11.8□□□□□ -0.52
VPS28-201ENST00000292510 MT-ATP6P00846 226 aa11.8□□□□□ -0.52
VPS28-201ENST00000292510 MT-ND1P03886 318 aa11.8□□□□□ -0.52
VPS28-201ENST00000292510 THBDP07204 575 aa11.8□□□□□ -0.52
VPS28-201ENST00000292510 THRBP10828 461 aa11.8□□□□□ -0.52
VPS28-201ENST00000292510 UMPSP11172 480 aa11.8□□□□□ -0.52
VPS28-201ENST00000292510 ZNF43P17038 809 aa11.8□□□□□ -0.52
VPS28-201ENST00000292510 PSMB1P20618 241 aaKnown RBP11.8□□□□□ -0.52
VPS28-201ENST00000292510 RBM34P42696 430 aaKnown RBP11.8□□□□□ -0.52
VPS28-201ENST00000292510 CLDN17P56750 224 aa11.8□□□□□ -0.52
VPS28-201ENST00000292510 VLDLRP98155 873 aa11.8□□□□□ -0.52
VPS28-201ENST00000292510 MS4A2Q01362 244 aa11.8□□□□□ -0.52
VPS28-201ENST00000292510 LGALS3BPQ08380 585 aa11.8□□□□□ -0.52
VPS28-201ENST00000292510 FAPQ12884 760 aa11.8□□□□□ -0.52
VPS28-201ENST00000292510 ITGADQ13349 1161 aa11.8□□□□□ -0.52
VPS28-201ENST00000292510 C1DQ13901 141 aaKnown RBP11.8□□□□□ -0.52
VPS28-201ENST00000292510 SPATS1Q496A3 300 aa11.8□□□□□ -0.52
VPS28-201ENST00000292510 SFRP5Q5T4F7 317 aa11.8□□□□□ -0.52
VPS28-201ENST00000292510 C9orf135Q5VTT2 229 aa11.8□□□□□ -0.52
VPS28-201ENST00000292510 ALKBH2Q6NS38 261 aa11.8□□□□□ -0.52
VPS28-201ENST00000292510 NIPAL3Q6P499 406 aa11.8□□□□□ -0.52
VPS28-201ENST00000292510 TMEM200AQ86VY9 491 aa11.8□□□□□ -0.52
VPS28-201ENST00000292510 MEX3DQ86XN8 651 aaKnown RBP11.8□□□□□ -0.52
VPS28-201ENST00000292510 OFCC1Q8IZS5 231 aa11.8□□□□□ -0.52
VPS28-201ENST00000292510 SCAIQ8N9R8 606 aa11.8□□□□□ -0.52
VPS28-201ENST00000292510 ADPRHL1Q8NDY3 354 aa11.8□□□□□ -0.52
VPS28-201ENST00000292510 OR5J2Q8NH18 312 aa11.8□□□□□ -0.52
VPS28-201ENST00000292510 KISS1RQ969F8 398 aaPredicted RBP11.8□□□□□ -0.52
VPS28-201ENST00000292510 S100PBPQ96BU1 408 aa11.8□□□□□ -0.52
VPS28-201ENST00000292510 PYURFQ96I23 114 aa11.8□□□□□ -0.52
VPS28-201ENST00000292510 C7orf34Q96L11 122 aa11.8□□□□□ -0.52
VPS28-201ENST00000292510 OXGR1Q96P68 337 aa11.8□□□□□ -0.52
VPS28-201ENST00000292510 THTPAQ9BU02 230 aa11.8□□□□□ -0.52
VPS28-201ENST00000292510 SLC19A3Q9BZV2 496 aa11.8□□□□□ -0.52
VPS28-201ENST00000292510 C1orf21Q9H246 121 aa11.8□□□□□ -0.52
VPS28-201ENST00000292510 FKRPQ9H9S5 495 aa11.8□□□□□ -0.52
VPS28-201ENST00000292510 MCCC2Q9HCC0 563 aa11.8□□□□□ -0.52
VPS28-201ENST00000292510 FANCFQ9NPI8 374 aa11.8□□□□□ -0.52
VPS28-201ENST00000292510 NANSQ9NR45 359 aa11.8□□□□□ -0.52
VPS28-201ENST00000292510 SLC7A10Q9NS82 523 aa11.8□□□□□ -0.52
VPS28-201ENST00000292510 PARPBPQ9NWS1 579 aa11.8□□□□□ -0.52
VPS28-201ENST00000292510 MRPL39Q9NYK5 338 aaKnown RBP11.8□□□□□ -0.52
VPS28-201ENST00000292510 NDUFAF4Q9P032 175 aa11.8□□□□□ -0.52
VPS28-201ENST00000292510 GPR52Q9Y2T5 361 aa11.8□□□□□ -0.52
VPS28-201ENST00000292510 SIAH2O43255 324 aa11.79□□□□□ -0.52
VPS28-201ENST00000292510 TRAF3IP2O43734 574 aaPredicted RBP11.79□□□□□ -0.52
VPS28-201ENST00000292510 SEMG1P04279 462 aa11.79□□□□□ -0.52
VPS28-201ENST00000292510 ASAH2BP0C7U1 165 aa11.79□□□□□ -0.52
VPS28-201ENST00000292510 ADORA3P0DMS8 318 aa11.79□□□□□ -0.52
VPS28-201ENST00000292510 FUT1P19526 365 aa11.79□□□□□ -0.52
VPS28-201ENST00000292510 AHCYP23526 432 aa11.79□□□□□ -0.52
VPS28-201ENST00000292510 IL32P24001 234 aa11.79□□□□□ -0.52
VPS28-201ENST00000292510 IFNA8P32881 189 aa11.79□□□□□ -0.52
VPS28-201ENST00000292510 POU3F1Q03052 451 aaPredicted RBP11.79□□□□□ -0.52
VPS28-201ENST00000292510 PUDPQ08623 228 aa11.79□□□□□ -0.52
VPS28-201ENST00000292510 DAZAP2Q15038 168 aaPredicted RBP11.79□□□□□ -0.52
VPS28-201ENST00000292510 P2RY6Q15077 328 aa11.79□□□□□ -0.52
VPS28-201ENST00000292510 TBPL2Q6SJ96 375 aa11.79□□□□□ -0.52
VPS28-201ENST00000292510 WDFY1Q8IWB7 410 aa11.79□□□□□ -0.52
VPS28-201ENST00000292510 UEVLDQ8IX04 471 aa11.79□□□□□ -0.52
VPS28-201ENST00000292510 ARHGAP24Q8N264 748 aa11.79□□□□□ -0.52
VPS28-201ENST00000292510 ZNF433Q8N7K0 673 aaPredicted RBP11.79□□□□□ -0.52
VPS28-201ENST00000292510 CCDC124Q96CT7 223 aaKnown RBP11.79□□□□□ -0.52
VPS28-201ENST00000292510 SLC7A6OSQ96CW6 309 aaPredicted RBP11.79□□□□□ -0.52
VPS28-201ENST00000292510 SGTBQ96EQ0 304 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms