RNA–Protein interactions for RNA: ENST00000288840.9

SMAD6-201, Transcript of SMAD family member 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMAD6, Length 3,835 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6-201ENST00000288840 PRAMEF7Q5VXH5 474 aa14.59□□□□□ -0.07
SMAD6-201ENST00000288840 OR10H5Q8NGA6 315 aa14.59□□□□□ -0.07
SMAD6-201ENST00000288840 HSD17B8Q92506 261 aa14.59□□□□□ -0.07
SMAD6-201ENST00000288840 FAM46BQ96A09 425 aa14.59□□□□□ -0.07
SMAD6-201ENST00000288840 SF3B6Q9Y3B4 125 aaKnown RBP14.59□□□□□ -0.07
SMAD6-201ENST00000288840 THBS1P07996 1170 aa14.58□□□□□ -0.07
SMAD6-201ENST00000288840 SLC35E2P0CK97 266 aa14.58□□□□□ -0.07
SMAD6-201ENST00000288840 RBMS1P29558 406 aaKnown RBP14.58□□□□□ -0.07
SMAD6-201ENST00000288840 FAUP35544 74 aaKnown RBP14.58□□□□□ -0.07
SMAD6-201ENST00000288840 ARFIP1P53367 373 aa14.58□□□□□ -0.07
SMAD6-201ENST00000288840 RAB38P57729 211 aa14.58□□□□□ -0.07
SMAD6-201ENST00000288840 TRAM1Q15629 374 aa14.58□□□□□ -0.07
SMAD6-201ENST00000288840 CBLN3Q6UW01 205 aa14.58□□□□□ -0.07
SMAD6-201ENST00000288840 CMTM4Q8IZR5 234 aa14.58□□□□□ -0.07
SMAD6-201ENST00000288840 C19orf47Q8N9M1 422 aaKnown RBP14.58□□□□□ -0.07
SMAD6-201ENST00000288840 OR51D1Q8NGF3 324 aa14.58□□□□□ -0.07
SMAD6-201ENST00000288840 CASTOR1Q8WTX7 329 aa14.58□□□□□ -0.07
SMAD6-201ENST00000288840 KLHL9Q9P2J3 617 aa14.58□□□□□ -0.07
SMAD6-201ENST00000288840 ENTPD2Q9Y5L3 495 aa14.58□□□□□ -0.07
SMAD6-201ENST00000288840 OR2T7P0C7T2 308 aa14.58□□□□□ -0.08
SMAD6-201ENST00000288840 UBL4AP11441 157 aa14.58□□□□□ -0.08
SMAD6-201ENST00000288840 GP1BBP13224 206 aa14.58□□□□□ -0.08
SMAD6-201ENST00000288840 ANXA7P20073 488 aaKnown RBP14.58□□□□□ -0.08
SMAD6-201ENST00000288840 RABIFP47224 123 aa14.58□□□□□ -0.08
SMAD6-201ENST00000288840 EEF1A1P68104 462 aaKnown RBP14.58□□□□□ -0.08
SMAD6-201ENST00000288840 GALNTL5Q7Z4T8 443 aa14.58□□□□□ -0.08
SMAD6-201ENST00000288840 CCDC28AQ8IWP9 274 aa14.58□□□□□ -0.08
SMAD6-201ENST00000288840 OR2T27Q8NH04 317 aa14.58□□□□□ -0.08
SMAD6-201ENST00000288840 BRIX1Q8TDN6 353 aaKnown RBP14.58□□□□□ -0.08
SMAD6-201ENST00000288840 SLC23A1Q9UHI7 598 aa14.58□□□□□ -0.08
SMAD6-201ENST00000288840 MRTO4Q9UKD2 239 aaKnown RBP14.58□□□□□ -0.08
SMAD6-201ENST00000288840 VAMP1P23763 118 aa14.58□□□□□ -0.08
SMAD6-201ENST00000288840 C1orf53Q5VUE5 145 aa14.58□□□□□ -0.08
SMAD6-201ENST00000288840 GARNL3Q5VVW2 1013 aa14.58□□□□□ -0.08
SMAD6-201ENST00000288840 TSLPQ969D9 159 aa14.58□□□□□ -0.08
SMAD6-201ENST00000288840 CREB3L1Q96BA8 519 aa14.58□□□□□ -0.08
SMAD6-201ENST00000288840 MED18Q9BUE0 208 aa14.58□□□□□ -0.08
SMAD6-201ENST00000288840 ARL6Q9H0F7 186 aa14.58□□□□□ -0.08
SMAD6-201ENST00000288840 RANBP3Q9H6Z4 567 aaPredicted RBP14.58□□□□□ -0.08
SMAD6-201ENST00000288840 PRAMEF26H0Y7S4 382 aa14.57□□□□□ -0.08
SMAD6-201ENST00000288840 ZNF780AO75290 641 aaPredicted RBP14.57□□□□□ -0.08
SMAD6-201ENST00000288840 SPI1P17947 270 aa14.57□□□□□ -0.08
SMAD6-201ENST00000288840 ATF4P18848 351 aaPredicted RBP14.57□□□□□ -0.08
SMAD6-201ENST00000288840 CXCL3P19876 107 aa14.57□□□□□ -0.08
SMAD6-201ENST00000288840 KIR2DL1P43626 348 aaPredicted RBP14.57□□□□□ -0.08
SMAD6-201ENST00000288840 CLDN20P56880 219 aa14.57□□□□□ -0.08
SMAD6-201ENST00000288840 MELKQ14680 651 aa14.57□□□□□ -0.08
SMAD6-201ENST00000288840 ZNF658BQ4V348 819 aaPredicted RBP14.57□□□□□ -0.08
SMAD6-201ENST00000288840 AKIRIN2Q53H80 203 aa14.57□□□□□ -0.08
SMAD6-201ENST00000288840 ZNF227Q86WZ6 799 aa14.57□□□□□ -0.08
SMAD6-201ENST00000288840 IQCF2Q8IXL9 164 aa14.57□□□□□ -0.08
SMAD6-201ENST00000288840 ZDHHC19Q8WVZ1 309 aaPredicted RBP14.57□□□□□ -0.08
SMAD6-201ENST00000288840 PRSS27Q9BQR3 290 aa14.57□□□□□ -0.08
SMAD6-201ENST00000288840 ADGRL4Q9HBW9 690 aa14.57□□□□□ -0.08
SMAD6-201ENST00000288840 NOX3Q9HBY0 568 aa14.57□□□□□ -0.08
SMAD6-201ENST00000288840 PRODH2Q9UF12 536 aa14.57□□□□□ -0.08
SMAD6-201ENST00000288840 PLXNA4Q9HCM2 1894 aa14.57□□□□□ -0.08
SMAD6-201ENST00000288840 OR6C68A6NDL8 312 aa14.57□□□□□ -0.08
SMAD6-201ENST00000288840 C4BPBP20851 252 aa14.57□□□□□ -0.08
SMAD6-201ENST00000288840 SNTA1Q13424 505 aa14.57□□□□□ -0.08
SMAD6-201ENST00000288840 VWA2Q5GFL6 755 aa14.57□□□□□ -0.08
SMAD6-201ENST00000288840 CARD17Q5XLA6 110 aa14.57□□□□□ -0.08
SMAD6-201ENST00000288840 PLCZ1Q86YW0 608 aa14.57□□□□□ -0.08
SMAD6-201ENST00000288840 PM20D2Q8IYS1 436 aa14.57□□□□□ -0.08
SMAD6-201ENST00000288840 ZPLD1Q8TCW7 415 aa14.57□□□□□ -0.08
SMAD6-201ENST00000288840 KIAA1143Q96AT1 154 aaPredicted RBP14.57□□□□□ -0.08
SMAD6-201ENST00000288840 C10orf90Q96M02 699 aa14.57□□□□□ -0.08
SMAD6-201ENST00000288840 GPER1Q99527 375 aa14.57□□□□□ -0.08
SMAD6-201ENST00000288840 GON7Q9BXV9 100 aa14.57□□□□□ -0.08
SMAD6-201ENST00000288840 PPP1R3EQ9H7J1 279 aa14.57□□□□□ -0.08
SMAD6-201ENST00000288840 CYSLTR2Q9NS75 346 aa14.57□□□□□ -0.08
SMAD6-201ENST00000288840 ZNF337Q9Y3M9 751 aa14.57□□□□□ -0.08
SMAD6-201ENST00000288840 BHLHE40O14503 412 aa14.57□□□□□ -0.08
SMAD6-201ENST00000288840 IFNA7P01567 189 aa14.57□□□□□ -0.08
SMAD6-201ENST00000288840 ENDOUP21128 410 aaKnown RBP14.57□□□□□ -0.08
SMAD6-201ENST00000288840 ADAM8P78325 824 aa14.57□□□□□ -0.08
SMAD6-201ENST00000288840 PRICKLE4Q2TBC4 344 aa14.57□□□□□ -0.08
SMAD6-201ENST00000288840 PLPP7Q8NBV4 271 aa14.57□□□□□ -0.08
SMAD6-201ENST00000288840 OR2T4Q8NH00 348 aa14.57□□□□□ -0.08
SMAD6-201ENST00000288840 RNF170Q96K19 258 aa14.57□□□□□ -0.08
SMAD6-201ENST00000288840 JSRP1Q96MG2 331 aaPredicted RBP14.57□□□□□ -0.08
SMAD6-201ENST00000288840 DDOQ99489 341 aa14.57□□□□□ -0.08
SMAD6-201ENST00000288840 NUDT22Q9BRQ3 303 aa14.57□□□□□ -0.08
SMAD6-201ENST00000288840 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP14.57□□□□□ -0.08
SMAD6-201ENST00000288840 FKRPQ9H9S5 495 aa14.57□□□□□ -0.08
SMAD6-201ENST00000288840 NRIP3Q9NQ35 241 aa14.57□□□□□ -0.08
SMAD6-201ENST00000288840 BAIAP2Q9UQB8 552 aa14.57□□□□□ -0.08
SMAD6-201ENST00000288840 NUBP2Q9Y5Y2 271 aa14.57□□□□□ -0.08
SMAD6-201ENST00000288840 A0A0B4J293 547 aa14.56□□□□□ -0.08
SMAD6-201ENST00000288840 OR5K3A6NET4 321 aa14.56□□□□□ -0.08
SMAD6-201ENST00000288840 OR5K4A6NMS3 321 aa14.56□□□□□ -0.08
SMAD6-201ENST00000288840 UBL3O95164 117 aa14.56□□□□□ -0.08
SMAD6-201ENST00000288840 NPR2P20594 1047 aa14.56□□□□□ -0.08
SMAD6-201ENST00000288840 TNFRSF4P43489 277 aa14.56□□□□□ -0.08
SMAD6-201ENST00000288840 VASNQ6EMK4 673 aa14.56□□□□□ -0.08
SMAD6-201ENST00000288840 RPL22L1Q6P5R6 122 aaKnown RBP14.56□□□□□ -0.08
SMAD6-201ENST00000288840 MARCH3Q86UD3 253 aa14.56□□□□□ -0.08
SMAD6-201ENST00000288840 TPRA1Q86W33 373 aa14.56□□□□□ -0.08
SMAD6-201ENST00000288840 EVA1BQ9NVM1 165 aa14.56□□□□□ -0.08
SMAD6-201ENST00000288840 ZNF281Q9Y2X9 895 aa14.56□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms