RNA–Protein interactions for RNA: ENST00000287543.4

MALSU1-201, Transcript of mitochondrial assembly of ribosomal large subunit 1, humanhuman

TSL 2

Gene MALSU1, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MALSU1-201ENST00000287543 GRPRP30550 384 aa16.63■□□□□ 0.25
MALSU1-201ENST00000287543 CDH12P55289 794 aa16.63■□□□□ 0.25
MALSU1-201ENST00000287543 Q5PR19 223 aa16.63■□□□□ 0.25
MALSU1-201ENST00000287543 NIPAL3Q6P499 406 aa16.63■□□□□ 0.25
MALSU1-201ENST00000287543 CALHM3Q86XJ0 350 aa16.63■□□□□ 0.25
MALSU1-201ENST00000287543 WFDC11Q8NEX6 87 aa16.63■□□□□ 0.25
MALSU1-201ENST00000287543 GPR32P1Q8NGA4 272 aa16.63■□□□□ 0.25
MALSU1-201ENST00000287543 RP9Q8TA86 221 aaKnown RBP16.63■□□□□ 0.25
MALSU1-201ENST00000287543 ZNF417Q8TAU3 575 aa16.63■□□□□ 0.25
MALSU1-201ENST00000287543 SMAP2Q8WU79 429 aaPredicted RBP16.63■□□□□ 0.25
MALSU1-201ENST00000287543 PROX1Q92786 737 aa16.63■□□□□ 0.25
MALSU1-201ENST00000287543 MPP4Q96JB8 637 aa16.63■□□□□ 0.25
MALSU1-201ENST00000287543 ZNF587Q96SQ5 575 aaPredicted RBP16.63■□□□□ 0.25
MALSU1-201ENST00000287543 ABCA4P78363 2273 aa16.62■□□□□ 0.25
MALSU1-201ENST00000287543 M0R3H8 397 aa16.62■□□□□ 0.25
MALSU1-201ENST00000287543 FXYD1O00168 92 aa16.62■□□□□ 0.25
MALSU1-201ENST00000287543 TPST2O60704 377 aa16.62■□□□□ 0.25
MALSU1-201ENST00000287543 SLC43A1O75387 559 aa16.62■□□□□ 0.25
MALSU1-201ENST00000287543 OPN1SWP03999 348 aa16.62■□□□□ 0.25
MALSU1-201ENST00000287543 HOXB1P14653 301 aaPredicted RBP16.62■□□□□ 0.25
MALSU1-201ENST00000287543 NQO1P15559 274 aaKnown RBP16.62■□□□□ 0.25
MALSU1-201ENST00000287543 PTH2RP49190 550 aa16.62■□□□□ 0.25
MALSU1-201ENST00000287543 SELENOPP49908 381 aa16.62■□□□□ 0.25
MALSU1-201ENST00000287543 SH3BGRP55822 239 aaPredicted RBP16.62■□□□□ 0.25
MALSU1-201ENST00000287543 CLDN17P56750 224 aa16.62■□□□□ 0.25
MALSU1-201ENST00000287543 SF3A3Q12874 501 aaKnown RBP eCLIP16.62■□□□□ 0.25
MALSU1-201ENST00000287543 RABL3Q5HYI8 236 aa16.62■□□□□ 0.25
MALSU1-201ENST00000287543 HMBOX1Q6NT76 420 aa16.62■□□□□ 0.25
MALSU1-201ENST00000287543 ARPINQ7Z6K5 226 aa16.62■□□□□ 0.25
MALSU1-201ENST00000287543 WDR31Q8NA23 367 aa16.62■□□□□ 0.25
MALSU1-201ENST00000287543 OR6T1Q8NGN1 323 aa16.62■□□□□ 0.25
MALSU1-201ENST00000287543 LILRB1Q8NHL6 650 aaPredicted RBP16.62■□□□□ 0.25
MALSU1-201ENST00000287543 TAMM41Q96BW9 452 aa16.62■□□□□ 0.25
MALSU1-201ENST00000287543 TRMT61AQ96FX7 289 aaKnown RBP16.62■□□□□ 0.25
MALSU1-201ENST00000287543 PERPQ96FX8 193 aa16.62■□□□□ 0.25
MALSU1-201ENST00000287543 SLC41A3Q96GZ6 507 aa16.62■□□□□ 0.25
MALSU1-201ENST00000287543 PCDHAC1Q9H158 963 aa16.62■□□□□ 0.25
MALSU1-201ENST00000287543 CISD1Q9NZ45 108 aaKnown RBP16.62■□□□□ 0.25
MALSU1-201ENST00000287543 LAMP3Q9UQV4 416 aa16.62■□□□□ 0.25
MALSU1-201ENST00000287543 TRAPPC13A5PLN9 417 aa16.61■□□□□ 0.25
MALSU1-201ENST00000287543 ABCD4O14678 606 aa16.61■□□□□ 0.25
MALSU1-201ENST00000287543 CD247P20963 164 aa16.61■□□□□ 0.25
MALSU1-201ENST00000287543 CD40P25942 277 aa16.61■□□□□ 0.25
MALSU1-201ENST00000287543 ZNF83P51522 516 aa16.61■□□□□ 0.25
MALSU1-201ENST00000287543 FOXG1P55316 489 aaPredicted RBP16.61■□□□□ 0.25
MALSU1-201ENST00000287543 IL1RL1Q01638 556 aa16.61■□□□□ 0.25
MALSU1-201ENST00000287543 PMS2P3Q13401 168 aa16.61■□□□□ 0.25
MALSU1-201ENST00000287543 ENTPD8Q5MY95 495 aa16.61■□□□□ 0.25
MALSU1-201ENST00000287543 C9orf135Q5VTT2 229 aa16.61■□□□□ 0.25
MALSU1-201ENST00000287543 TTC33Q6PID6 262 aaPredicted RBP16.61■□□□□ 0.25
MALSU1-201ENST00000287543 LINC00114Q6XXX2 140 aa16.61■□□□□ 0.25
MALSU1-201ENST00000287543 YTHDF3Q7Z739 585 aaKnown RBP16.61■□□□□ 0.25
MALSU1-201ENST00000287543 UEVLDQ8IX04 471 aa16.61■□□□□ 0.25
MALSU1-201ENST00000287543 KDM8Q8N371 416 aa16.61■□□□□ 0.25
MALSU1-201ENST00000287543 C10orf53Q8N6V4 93 aa16.61■□□□□ 0.25
MALSU1-201ENST00000287543 PIK3C3Q8NEB9 887 aa16.61■□□□□ 0.25
MALSU1-201ENST00000287543 MAGEE2Q8TD90 523 aaPredicted RBP16.61■□□□□ 0.25
MALSU1-201ENST00000287543 C10orf82Q8WW14 230 aa16.61■□□□□ 0.25
MALSU1-201ENST00000287543 GTPBP3Q969Y2 492 aaKnown RBP16.61■□□□□ 0.25
MALSU1-201ENST00000287543 ZNF583Q96ND8 569 aa16.61■□□□□ 0.25
MALSU1-201ENST00000287543 WFDC6Q9BQY6 131 aa16.61■□□□□ 0.25
MALSU1-201ENST00000287543 BDH2Q9BUT1 245 aa16.61■□□□□ 0.25
MALSU1-201ENST00000287543 SLC19A3Q9BZV2 496 aa16.61■□□□□ 0.25
MALSU1-201ENST00000287543 GRIP2Q9C0E4 1043 aa16.61■□□□□ 0.25
MALSU1-201ENST00000287543 POLR2J2Q9GZM3 115 aaKnown RBP16.61■□□□□ 0.25
MALSU1-201ENST00000287543 POLR2J3Q9H1A7 115 aaKnown RBP16.61■□□□□ 0.25
MALSU1-201ENST00000287543 ALG2Q9H553 416 aa16.61■□□□□ 0.25
MALSU1-201ENST00000287543 FKRPQ9H9S5 495 aa16.61■□□□□ 0.25
MALSU1-201ENST00000287543 DLL4Q9NR61 685 aa16.61■□□□□ 0.25
MALSU1-201ENST00000287543 MRPL39Q9NYK5 338 aaKnown RBP16.61■□□□□ 0.25
MALSU1-201ENST00000287543 NPAP1Q9NZP6 1156 aa16.61■□□□□ 0.25
MALSU1-201ENST00000287543 FAM171A2A8MVW0 826 aa16.6■□□□□ 0.25
MALSU1-201ENST00000287543 RPL36A-HNRNPH2H7BZ11 118 aa16.6■□□□□ 0.25
MALSU1-201ENST00000287543 M0R1B8 84 aa16.6■□□□□ 0.25
MALSU1-201ENST00000287543 BGLAPP02818 100 aa16.6■□□□□ 0.25
MALSU1-201ENST00000287543 CDH11P55287 796 aa16.6■□□□□ 0.25
MALSU1-201ENST00000287543 UBE2NP61088 152 aaKnown RBP16.6■□□□□ 0.25
MALSU1-201ENST00000287543 SLC22A25Q6T423 547 aa16.6■□□□□ 0.25
MALSU1-201ENST00000287543 KRTAP1-3Q8IUG1 177 aa16.6■□□□□ 0.25
MALSU1-201ENST00000287543 PIAS4Q8N2W9 510 aaPredicted RBP16.6■□□□□ 0.25
MALSU1-201ENST00000287543 GPR137CQ8N3F9 429 aa16.6■□□□□ 0.25
MALSU1-201ENST00000287543 KBTBD8Q8NFY9 601 aa16.6■□□□□ 0.25
MALSU1-201ENST00000287543 VANGL1Q8TAA9 524 aaPredicted RBP16.6■□□□□ 0.25
MALSU1-201ENST00000287543 ADAMTS16Q8TE57 1224 aa16.6■□□□□ 0.25
MALSU1-201ENST00000287543 C18orf12Q96KH6 178 aa16.6■□□□□ 0.25
MALSU1-201ENST00000287543 B3GAT1Q9P2W7 334 aa16.6■□□□□ 0.25
MALSU1-201ENST00000287543 POU2F3Q9UKI9 436 aa16.6■□□□□ 0.25
MALSU1-201ENST00000287543 NOX1Q9Y5S8 564 aa16.6■□□□□ 0.25
MALSU1-201ENST00000287543 CPSF4LA6NMK7 179 aaKnown RBP16.59■□□□□ 0.25
MALSU1-201ENST00000287543 FAM220BPB1ANY3 271 aa16.59■□□□□ 0.25
MALSU1-201ENST00000287543 SHISA9B4DS77 424 aa16.59■□□□□ 0.25
MALSU1-201ENST00000287543 NDUFAB1O14561 156 aa16.59■□□□□ 0.25
MALSU1-201ENST00000287543 ZNF432O94892 652 aa16.59■□□□□ 0.25
MALSU1-201ENST00000287543 OR6A2O95222 327 aa16.59■□□□□ 0.25
MALSU1-201ENST00000287543 DANCRP0C864 163 aa16.59■□□□□ 0.25
MALSU1-201ENST00000287543 CDH2P19022 906 aaPredicted RBP16.59■□□□□ 0.25
MALSU1-201ENST00000287543 NPTX1Q15818 432 aa16.59■□□□□ 0.25
MALSU1-201ENST00000287543 ETFDHQ16134 617 aa16.59■□□□□ 0.25
MALSU1-201ENST00000287543 AGAP6Q5VW22 663 aa16.59■□□□□ 0.25
MALSU1-201ENST00000287543 ANKRD16Q6P6B7 361 aa16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms