RNA–Protein interactions for RNA: ENST00000286835.11

SCAF4-201, Transcript of SR-related CTD associated factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SCAF4, Length 4,193 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-201ENST00000286835 CDK5R1Q15078 307 aa12.33□□□□□ -0.44
SCAF4-201ENST00000286835 SLC36A2Q495M3 483 aa12.33□□□□□ -0.44
SCAF4-201ENST00000286835 HACD4Q5VWC8 232 aa12.33□□□□□ -0.44
SCAF4-201ENST00000286835 PLXNA3P51805 1871 aa12.32□□□□□ -0.44
SCAF4-201ENST00000286835 C7orf66A4D0T2 115 aa12.32□□□□□ -0.44
SCAF4-201ENST00000286835 BLKP51451 505 aa12.32□□□□□ -0.44
SCAF4-201ENST00000286835 CTXN1P60606 82 aa12.32□□□□□ -0.44
SCAF4-201ENST00000286835 ZNF85Q03923 595 aa12.32□□□□□ -0.44
SCAF4-201ENST00000286835 ERV3-1Q14264 604 aa12.32□□□□□ -0.44
SCAF4-201ENST00000286835 MLF2Q15773 248 aaPredicted RBP12.32□□□□□ -0.44
SCAF4-201ENST00000286835 RAB12Q6IQ22 244 aa12.32□□□□□ -0.44
SCAF4-201ENST00000286835 RPL22L1Q6P5R6 122 aaKnown RBP12.32□□□□□ -0.44
SCAF4-201ENST00000286835 WDR88Q6ZMY6 472 aa12.32□□□□□ -0.44
SCAF4-201ENST00000286835 OR6V1Q8N148 313 aa12.32□□□□□ -0.44
SCAF4-201ENST00000286835 CDRT4Q8N9R6 151 aa12.32□□□□□ -0.44
SCAF4-201ENST00000286835 CAMKVQ8NCB2 501 aa12.32□□□□□ -0.44
SCAF4-201ENST00000286835 OR52R1Q8NGF1 315 aa12.32□□□□□ -0.44
SCAF4-201ENST00000286835 OR51D1Q8NGF3 324 aa12.32□□□□□ -0.44
SCAF4-201ENST00000286835 GAL3ST4Q96RP7 486 aa12.32□□□□□ -0.44
SCAF4-201ENST00000286835 GDF15Q99988 308 aa12.32□□□□□ -0.44
SCAF4-201ENST00000286835 ADGRL4Q9HBW9 690 aa12.32□□□□□ -0.44
SCAF4-201ENST00000286835 CA10Q9NS85 328 aa12.32□□□□□ -0.44
SCAF4-201ENST00000286835 NCDNQ9UBB6 729 aa12.32□□□□□ -0.44
SCAF4-201ENST00000286835 RABL2AQ9UBK7 228 aaPredicted RBP12.32□□□□□ -0.44
SCAF4-201ENST00000286835 C5orf51A6NDU8 294 aa12.32□□□□□ -0.44
SCAF4-201ENST00000286835 SC5DO75845 299 aa12.32□□□□□ -0.44
SCAF4-201ENST00000286835 RRASP10301 218 aa12.32□□□□□ -0.44
SCAF4-201ENST00000286835 NID1P14543 1247 aa12.32□□□□□ -0.44
SCAF4-201ENST00000286835 LTBQ06643 244 aa12.32□□□□□ -0.44
SCAF4-201ENST00000286835 TUSC1Q2TAM9 212 aa12.32□□□□□ -0.44
SCAF4-201ENST00000286835 TMIEQ8NEW7 156 aa12.32□□□□□ -0.44
SCAF4-201ENST00000286835 TTC9Q92623 222 aa12.32□□□□□ -0.44
SCAF4-201ENST00000286835 SMIM19Q96E16 107 aa12.32□□□□□ -0.44
SCAF4-201ENST00000286835 OR1F2PQ96R84 312 aa12.32□□□□□ -0.44
SCAF4-201ENST00000286835 FKRPQ9H9S5 495 aa12.32□□□□□ -0.44
SCAF4-201ENST00000286835 FAM186AA6NE01 2351 aa12.32□□□□□ -0.44
SCAF4-201ENST00000286835 A0A1B0GTH9 108 aa12.32□□□□□ -0.44
SCAF4-201ENST00000286835 A0A1W2PPV9 198 aa12.32□□□□□ -0.44
SCAF4-201ENST00000286835 OR14I1A6ND48 311 aa12.32□□□□□ -0.44
SCAF4-201ENST00000286835 F5H0A9 414 aaPredicted RBP12.32□□□□□ -0.44
SCAF4-201ENST00000286835 XKRYO14609 159 aa12.32□□□□□ -0.44
SCAF4-201ENST00000286835 OR2T7P0C7T2 308 aa12.32□□□□□ -0.44
SCAF4-201ENST00000286835 HTR2AP28223 471 aa12.32□□□□□ -0.44
SCAF4-201ENST00000286835 NDUFS1P28331 727 aa12.32□□□□□ -0.44
SCAF4-201ENST00000286835 BDH1Q02338 343 aa12.32□□□□□ -0.44
SCAF4-201ENST00000286835 RPE65Q16518 533 aa12.32□□□□□ -0.44
SCAF4-201ENST00000286835 C1orf53Q5VUE5 145 aa12.32□□□□□ -0.44
SCAF4-201ENST00000286835 TMEM81Q6P7N7 255 aa12.32□□□□□ -0.44
SCAF4-201ENST00000286835 TMUB2Q71RG4 321 aa12.32□□□□□ -0.44
SCAF4-201ENST00000286835 OR2L8Q8NGY9 312 aa12.32□□□□□ -0.44
SCAF4-201ENST00000286835 OR2T27Q8NH04 317 aa12.32□□□□□ -0.44
SCAF4-201ENST00000286835 GAL3ST3Q96A11 431 aa12.32□□□□□ -0.44
SCAF4-201ENST00000286835 KLHDC7BQ96G42 594 aa12.32□□□□□ -0.44
SCAF4-201ENST00000286835 SLC6A15Q9H2J7 730 aa12.32□□□□□ -0.44
SCAF4-201ENST00000286835 PRSS16Q9NQE7 514 aa12.32□□□□□ -0.44
SCAF4-201ENST00000286835 ING1Q9UK53 422 aaPredicted RBP12.32□□□□□ -0.44
SCAF4-201ENST00000286835 SIGLEC7Q9Y286 467 aa12.32□□□□□ -0.44
SCAF4-201ENST00000286835 ZNF281Q9Y2X9 895 aa12.32□□□□□ -0.44
SCAF4-201ENST00000286835 CNOT1A5YKK6 2376 aaKnown RBP12.31□□□□□ -0.44
SCAF4-201ENST00000286835 OR2W5A6NFC9 320 aa12.31□□□□□ -0.44
SCAF4-201ENST00000286835 DISC1C4P0D8 188 aa12.31□□□□□ -0.44
SCAF4-201ENST00000286835 IMPA2O14732 288 aa12.31□□□□□ -0.44
SCAF4-201ENST00000286835 SULT1A3P0DMM9 295 aa12.31□□□□□ -0.44
SCAF4-201ENST00000286835 SULT1A4P0DMN0 295 aa12.31□□□□□ -0.44
SCAF4-201ENST00000286835 CBFBQ13951 182 aa12.31□□□□□ -0.44
SCAF4-201ENST00000286835 TRILQ7L0X0 811 aa12.31□□□□□ -0.44
SCAF4-201ENST00000286835 ZNF765Q7L2R6 523 aa12.31□□□□□ -0.44
SCAF4-201ENST00000286835 TMEM106AQ96A25 262 aa12.31□□□□□ -0.44
SCAF4-201ENST00000286835 LINC00615Q96LM1 132 aaPredicted RBP12.31□□□□□ -0.44
SCAF4-201ENST00000286835 Q96M85 177 aa12.31□□□□□ -0.44
SCAF4-201ENST00000286835 OR2M4Q96R27 311 aa12.31□□□□□ -0.44
SCAF4-201ENST00000286835 TSNAXQ99598 290 aaKnown RBP12.31□□□□□ -0.44
SCAF4-201ENST00000286835 TRIM2Q9C040 744 aa12.31□□□□□ -0.44
SCAF4-201ENST00000286835 C14orf105Q9NVL8 296 aa12.31□□□□□ -0.44
SCAF4-201ENST00000286835 IFITM5A6NNB3 132 aa12.31□□□□□ -0.44
SCAF4-201ENST00000286835 PYCARD-AS1I3L0S3 204 aa12.31□□□□□ -0.44
SCAF4-201ENST00000286835 AMY2AP04746 511 aa12.31□□□□□ -0.44
SCAF4-201ENST00000286835 TNFRSF17Q02223 184 aa12.31□□□□□ -0.44
SCAF4-201ENST00000286835 HLA-DQA1Q5Y7H0 255 aa12.31□□□□□ -0.44
SCAF4-201ENST00000286835 TMEM185AQ8NFB2 350 aa12.31□□□□□ -0.44
SCAF4-201ENST00000286835 OR51S1Q8NGJ8 323 aa12.31□□□□□ -0.44
SCAF4-201ENST00000286835 MYADMQ96S97 322 aa12.31□□□□□ -0.44
SCAF4-201ENST00000286835 IL21RQ9HBE5 538 aa12.31□□□□□ -0.44
SCAF4-201ENST00000286835 GRHPRQ9UBQ7 328 aa12.31□□□□□ -0.44
SCAF4-201ENST00000286835 YBX2Q9Y2T7 364 aaKnown RBP12.31□□□□□ -0.44
SCAF4-201ENST00000286835 IGKV1-8A0A0C4DH67 115 aa12.31□□□□□ -0.44
SCAF4-201ENST00000286835 DCDC2BA2VCK2 349 aa12.31□□□□□ -0.44
SCAF4-201ENST00000286835 MCIDASD6RGH6 385 aa12.31□□□□□ -0.44
SCAF4-201ENST00000286835 SDC3O75056 442 aa12.31□□□□□ -0.44
SCAF4-201ENST00000286835 THY1P04216 161 aa12.31□□□□□ -0.44
SCAF4-201ENST00000286835 GNALP38405 381 aa12.31□□□□□ -0.44
SCAF4-201ENST00000286835 SEC61A1P61619 476 aaKnown RBP12.31□□□□□ -0.44
SCAF4-201ENST00000286835 RPS15AP62244 130 aaKnown RBP12.31□□□□□ -0.44
SCAF4-201ENST00000286835 FIGLAQ6QHK4 219 aa12.31□□□□□ -0.44
SCAF4-201ENST00000286835 ZNF546Q86UE3 836 aa12.31□□□□□ -0.44
SCAF4-201ENST00000286835 FOXRED2Q8IWF2 684 aa12.31□□□□□ -0.44
SCAF4-201ENST00000286835 RNF113BQ8IZP6 322 aaKnown RBP12.31□□□□□ -0.44
SCAF4-201ENST00000286835 LMX1AQ8TE12 382 aa12.31□□□□□ -0.44
SCAF4-201ENST00000286835 FBXW5Q969U6 566 aa12.31□□□□□ -0.44
SCAF4-201ENST00000286835 AIFM2Q9BRQ8 373 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms