RNA–Protein interactions for RNA: ENST00000284637.13

SH3RF1-201, Transcript of SH3 domain containing ring finger 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SH3RF1, Length 5,272 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF1-201ENST00000284637 C20orf85Q9H1P6 137 aa15.29■□□□□ 0.04
SH3RF1-201ENST00000284637 EHFQ9NZC4 300 aa15.29■□□□□ 0.04
SH3RF1-201ENST00000284637 FTSJ1Q9UET6 329 aa15.29■□□□□ 0.04
SH3RF1-201ENST00000284637 ZP3P21754 424 aa15.29■□□□□ 0.04
SH3RF1-201ENST00000284637 NXNL2Q5VZ03 156 aa15.29■□□□□ 0.04
SH3RF1-201ENST00000284637 WBP2NLQ6ICG8 309 aa15.29■□□□□ 0.04
SH3RF1-201ENST00000284637 OR51Q1Q8NH59 317 aa15.29■□□□□ 0.04
SH3RF1-201ENST00000284637 NRIP3Q9NQ35 241 aa15.29■□□□□ 0.04
SH3RF1-201ENST00000284637 GPATCH2Q9NW75 528 aa15.29■□□□□ 0.04
SH3RF1-201ENST00000284637 TIAM2Q8IVF5 1701 aa15.28■□□□□ 0.04
SH3RF1-201ENST00000284637 PIGBOS1A0A0B4J2F0 54 aa15.28■□□□□ 0.04
SH3RF1-201ENST00000284637 TRABD2BA6NFA1 517 aa15.28■□□□□ 0.04
SH3RF1-201ENST00000284637 DPM1O60762 260 aa15.28■□□□□ 0.04
SH3RF1-201ENST00000284637 DBHP09172 617 aa15.28■□□□□ 0.04
SH3RF1-201ENST00000284637 SPI1P17947 270 aa15.28■□□□□ 0.04
SH3RF1-201ENST00000284637 CTBSQ01459 385 aa15.28■□□□□ 0.04
SH3RF1-201ENST00000284637 SLC39A11Q8N1S5 342 aa15.28■□□□□ 0.04
SH3RF1-201ENST00000284637 MFSD4AQ8N468 514 aa15.28■□□□□ 0.04
SH3RF1-201ENST00000284637 CNTNAP3Q9BZ76 1288 aa15.28■□□□□ 0.04
SH3RF1-201ENST00000284637 LIN7BQ9HAP6 207 aa15.28■□□□□ 0.04
SH3RF1-201ENST00000284637 CAMK2AQ9UQM7 478 aa15.28■□□□□ 0.04
SH3RF1-201ENST00000284637 RGPD2P0DJD1 1756 aa15.28■□□□□ 0.04
SH3RF1-201ENST00000284637 SULT2B1O00204 365 aa15.28■□□□□ 0.04
SH3RF1-201ENST00000284637 ADAM5Q6NVV9 412 aa15.28■□□□□ 0.04
SH3RF1-201ENST00000284637 TRAPPC6BQ86SZ2 158 aa15.28■□□□□ 0.04
SH3RF1-201ENST00000284637 OR2A12Q8NGT7 310 aa15.28■□□□□ 0.04
SH3RF1-201ENST00000284637 SHOXO15266 292 aa15.28■□□□□ 0.04
SH3RF1-201ENST00000284637 CSF3P09919 207 aa15.28■□□□□ 0.04
SH3RF1-201ENST00000284637 SLC6A11P48066 632 aa15.28■□□□□ 0.04
SH3RF1-201ENST00000284637 POU3F1Q03052 451 aaPredicted RBP15.28■□□□□ 0.04
SH3RF1-201ENST00000284637 MLC1Q15049 377 aa15.28■□□□□ 0.04
SH3RF1-201ENST00000284637 CCSMST1Q4G0I0 132 aa15.28■□□□□ 0.04
SH3RF1-201ENST00000284637 C17orf99Q6UX52 265 aa15.28■□□□□ 0.04
SH3RF1-201ENST00000284637 MBOAT2Q6ZWT7 520 aa15.28■□□□□ 0.04
SH3RF1-201ENST00000284637 OR5K2Q8NHB8 316 aa15.28■□□□□ 0.04
SH3RF1-201ENST00000284637 TMEM255BQ8WV15 326 aa15.28■□□□□ 0.04
SH3RF1-201ENST00000284637 NMNAT3Q96T66 252 aa15.28■□□□□ 0.04
SH3RF1-201ENST00000284637 ALG12Q9BV10 488 aa15.28■□□□□ 0.04
SH3RF1-201ENST00000284637 KLKB1P03952 638 aa15.28■□□□□ 0.04
SH3RF1-201ENST00000284637 NDUFA6P56556 154 aa15.28■□□□□ 0.04
SH3RF1-201ENST00000284637 XKR7Q5GH72 579 aa15.28■□□□□ 0.04
SH3RF1-201ENST00000284637 GAREM1Q9H706 876 aa15.28■□□□□ 0.04
SH3RF1-201ENST00000284637 DOK2O60496 412 aa15.27■□□□□ 0.04
SH3RF1-201ENST00000284637 GPX5O75715 221 aa15.27■□□□□ 0.04
SH3RF1-201ENST00000284637 CCR9P51686 369 aa15.27■□□□□ 0.04
SH3RF1-201ENST00000284637 BCL2A1Q16548 175 aa15.27■□□□□ 0.04
SH3RF1-201ENST00000284637 MRPL41Q8IXM3 137 aaKnown RBP15.27■□□□□ 0.04
SH3RF1-201ENST00000284637 OR52H1Q8NGJ2 320 aa15.27■□□□□ 0.04
SH3RF1-201ENST00000284637 EXOSC6Q5RKV6 272 aaKnown RBP15.27■□□□□ 0.04
SH3RF1-201ENST00000284637 GPR139Q6DWJ6 353 aa15.27■□□□□ 0.04
SH3RF1-201ENST00000284637 OR10K2Q6IF99 312 aa15.27■□□□□ 0.04
SH3RF1-201ENST00000284637 SLC39A5Q6ZMH5 540 aa15.27■□□□□ 0.04
SH3RF1-201ENST00000284637 RNF113BQ8IZP6 322 aaKnown RBP15.27■□□□□ 0.04
SH3RF1-201ENST00000284637 DNAAF1Q8NEP3 725 aa15.27■□□□□ 0.04
SH3RF1-201ENST00000284637 BBS1Q8NFJ9 593 aa15.27■□□□□ 0.04
SH3RF1-201ENST00000284637 IL23AQ9NPF7 189 aa15.27■□□□□ 0.04
SH3RF1-201ENST00000284637 NOX4Q9NPH5 578 aa15.27■□□□□ 0.04
SH3RF1-201ENST00000284637 SPHK1Q9NYA1 384 aa15.27■□□□□ 0.04
SH3RF1-201ENST00000284637 SLC6A14Q9UN76 642 aa15.27■□□□□ 0.04
SH3RF1-201ENST00000284637 KIAA0141Q14154 515 aaPredicted RBP15.27■□□□□ 0.03
SH3RF1-201ENST00000284637 RBM45Q8IUH3 476 aaKnown RBP15.27■□□□□ 0.03
SH3RF1-201ENST00000284637 SDSLQ96GA7 329 aa15.27■□□□□ 0.03
SH3RF1-201ENST00000284637 NUDT22Q9BRQ3 303 aa15.27■□□□□ 0.03
SH3RF1-201ENST00000284637 SRRQ9GZT4 340 aa15.27■□□□□ 0.03
SH3RF1-201ENST00000284637 SLC25A32Q9H2D1 315 aa15.27■□□□□ 0.03
SH3RF1-201ENST00000284637 UBQLN4Q9NRR5 601 aa15.27■□□□□ 0.03
SH3RF1-201ENST00000284637 ADAM18Q9Y3Q7 739 aa15.27■□□□□ 0.03
SH3RF1-201ENST00000284637 SURF4O15260 269 aa15.27■□□□□ 0.03
SH3RF1-201ENST00000284637 OR2T7P0C7T2 308 aa15.27■□□□□ 0.03
SH3RF1-201ENST00000284637 CR2P20023 1033 aa15.27■□□□□ 0.03
SH3RF1-201ENST00000284637 SRP9P49458 86 aaKnown RBP15.27■□□□□ 0.03
SH3RF1-201ENST00000284637 DSC1Q08554 894 aa15.27■□□□□ 0.03
SH3RF1-201ENST00000284637 BAMBIQ13145 260 aa15.27■□□□□ 0.03
SH3RF1-201ENST00000284637 ZNF750Q32MQ0 723 aa15.27■□□□□ 0.03
SH3RF1-201ENST00000284637 UNQ6126/PRO20091Q6UXV3 157 aa15.27■□□□□ 0.03
SH3RF1-201ENST00000284637 OR2T27Q8NH04 317 aa15.27■□□□□ 0.03
SH3RF1-201ENST00000284637 SLC22A12Q96S37 553 aa15.27■□□□□ 0.03
SH3RF1-201ENST00000284637 R3HDMLQ9H3Y0 253 aa15.27■□□□□ 0.03
SH3RF1-201ENST00000284637 KLHL13Q9P2N7 655 aa15.27■□□□□ 0.03
SH3RF1-201ENST00000284637 ADAM29Q9UKF5 820 aa15.27■□□□□ 0.03
SH3RF1-201ENST00000284637 PPT2Q9UMR5 302 aa15.27■□□□□ 0.03
SH3RF1-201ENST00000284637 IMPA2O14732 288 aa15.26■□□□□ 0.03
SH3RF1-201ENST00000284637 OTX2P32243 289 aa15.26■□□□□ 0.03
SH3RF1-201ENST00000284637 SLC7A9P82251 487 aa15.26■□□□□ 0.03
SH3RF1-201ENST00000284637 FOXK2Q01167 660 aa15.26■□□□□ 0.03
SH3RF1-201ENST00000284637 CCDC190Q86UF4 302 aa15.26■□□□□ 0.03
SH3RF1-201ENST00000284637 LINC01599Q8WXQ3 324 aa15.26■□□□□ 0.03
SH3RF1-201ENST00000284637 NEURL3Q96EH8 262 aa15.26■□□□□ 0.03
SH3RF1-201ENST00000284637 SORCS2Q96PQ0 1159 aa15.26■□□□□ 0.03
SH3RF1-201ENST00000284637 CDCA4Q9BXL8 241 aa15.26■□□□□ 0.03
SH3RF1-201ENST00000284637 GLIPR2Q9H4G4 154 aa15.26■□□□□ 0.03
SH3RF1-201ENST00000284637 TRAPPC4Q9Y296 219 aa15.26■□□□□ 0.03
SH3RF1-201ENST00000284637 A0A0A6YYJ9 748 aa15.26■□□□□ 0.03
SH3RF1-201ENST00000284637 HHLA1C9JL84 531 aa15.26■□□□□ 0.03
SH3RF1-201ENST00000284637 B3GALT4O96024 378 aa15.26■□□□□ 0.03
SH3RF1-201ENST00000284637 SBK2P0C263 348 aa15.26■□□□□ 0.03
SH3RF1-201ENST00000284637 ACY1Q03154 408 aa15.26■□□□□ 0.03
SH3RF1-201ENST00000284637 HENMT1Q5T8I9 393 aaKnown RBP15.26■□□□□ 0.03
SH3RF1-201ENST00000284637 CMIPQ8IY22 773 aa15.26■□□□□ 0.03
SH3RF1-201ENST00000284637 OR13C9Q8NGT0 318 aa15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms