RNA–Protein interactions for RNA: ENST00000282516.12

NIPBL-201, Transcript of NIPBL, cohesin loading factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NIPBL, Length 10,435 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-201ENST00000282516 OR2T11Q8NH01 316 aa8.15□□□□□ -1.1
NIPBL-201ENST00000282516 YIPF5Q969M3 257 aa8.15□□□□□ -1.1
NIPBL-201ENST00000282516 TSACCQ96A04 125 aaPredicted RBP8.15□□□□□ -1.1
NIPBL-201ENST00000282516 SIGLEC10Q96LC7 697 aa8.15□□□□□ -1.1
NIPBL-201ENST00000282516 LIN7CQ9NUP9 197 aaKnown RBP8.15□□□□□ -1.1
NIPBL-201ENST00000282516 SCML1Q9UN30 329 aa8.15□□□□□ -1.1
NIPBL-201ENST00000282516 ADAM12O43184 909 aa8.15□□□□□ -1.1
NIPBL-201ENST00000282516 HTR2CP28335 458 aa8.15□□□□□ -1.1
NIPBL-201ENST00000282516 SLC35A1P78382 337 aa8.15□□□□□ -1.1
NIPBL-201ENST00000282516 TBCEQ15813 527 aaPredicted RBP8.15□□□□□ -1.1
NIPBL-201ENST00000282516 BEX5Q5H9J7 111 aa8.15□□□□□ -1.1
NIPBL-201ENST00000282516 MMP21Q8N119 569 aa8.15□□□□□ -1.1
NIPBL-201ENST00000282516 MED17Q9NVC6 651 aa8.15□□□□□ -1.1
NIPBL-201ENST00000282516 IGLV3-22A0A075B6J6 115 aa8.15□□□□□ -1.11
NIPBL-201ENST00000282516 MRPL33O75394 65 aaKnown RBP8.15□□□□□ -1.11
NIPBL-201ENST00000282516 NXPH2O95156 264 aa8.15□□□□□ -1.11
NIPBL-201ENST00000282516 PTBP3O95758 552 aaKnown RBP8.15□□□□□ -1.11
NIPBL-201ENST00000282516 HTR5AP47898 357 aa8.15□□□□□ -1.11
NIPBL-201ENST00000282516 BIDP55957 195 aa8.15□□□□□ -1.11
NIPBL-201ENST00000282516 LCN6P62502 163 aa8.15□□□□□ -1.11
NIPBL-201ENST00000282516 SELENOWP63302 87 aa8.15□□□□□ -1.11
NIPBL-201ENST00000282516 PGGHGQ32M88 737 aa8.15□□□□□ -1.11
NIPBL-201ENST00000282516 PIP5KL1Q5T9C9 394 aa8.15□□□□□ -1.11
NIPBL-201ENST00000282516 OR51I2Q9H344 312 aa8.15□□□□□ -1.11
NIPBL-201ENST00000282516 DCAF16Q9NXF7 216 aa8.15□□□□□ -1.11
NIPBL-201ENST00000282516 CLCF1Q9UBD9 225 aa8.15□□□□□ -1.11
NIPBL-201ENST00000282516 SLC45A1Q9Y2W3 748 aa8.15□□□□□ -1.11
NIPBL-201ENST00000282516 MED1Q15648 1581 aaPredicted RBP8.15□□□□□ -1.11
NIPBL-201ENST00000282516 HNRNPA2B1P22626 353 aaKnown RBP8.15□□□□□ -1.11
NIPBL-201ENST00000282516 KIR2DS3Q14952 304 aa8.15□□□□□ -1.11
NIPBL-201ENST00000282516 ADGRE4PQ86SQ3 457 aa8.15□□□□□ -1.11
NIPBL-201ENST00000282516 LRRC56Q8IYG6 542 aaPredicted RBP8.15□□□□□ -1.11
NIPBL-201ENST00000282516 ADGRF3Q8IZF5 1079 aa8.15□□□□□ -1.11
NIPBL-201ENST00000282516 FAM185AQ8N0U4 392 aa8.15□□□□□ -1.11
NIPBL-201ENST00000282516 SLC41A2Q96JW4 573 aa8.15□□□□□ -1.11
NIPBL-201ENST00000282516 PEBP4Q96S96 227 aa8.15□□□□□ -1.11
NIPBL-201ENST00000282516 ALG12Q9BV10 488 aa8.15□□□□□ -1.11
NIPBL-201ENST00000282516 ABHD6Q9BV23 337 aa8.15□□□□□ -1.11
NIPBL-201ENST00000282516 DCAF13Q9NV06 445 aaKnown RBP8.15□□□□□ -1.11
NIPBL-201ENST00000282516 ZFP92A6NM28 416 aa8.15□□□□□ -1.11
NIPBL-201ENST00000282516 ZNF732B4DXR9 585 aa8.15□□□□□ -1.11
NIPBL-201ENST00000282516 DSC1Q08554 894 aa8.15□□□□□ -1.11
NIPBL-201ENST00000282516 RPL7L1Q6DKI1 246 aaKnown RBP8.15□□□□□ -1.11
NIPBL-201ENST00000282516 ALKAL2Q6UX46 152 aa8.15□□□□□ -1.11
NIPBL-201ENST00000282516 IGDCC3Q8IVU1 814 aa8.15□□□□□ -1.11
NIPBL-201ENST00000282516 CPXM2Q8N436 756 aa8.15□□□□□ -1.11
NIPBL-201ENST00000282516 TMEM217Q8N7C4 229 aa8.15□□□□□ -1.11
NIPBL-201ENST00000282516 ZNF566Q969W8 418 aa8.15□□□□□ -1.11
NIPBL-201ENST00000282516 CCDC74BQ96LY2 380 aa8.15□□□□□ -1.11
NIPBL-201ENST00000282516 RANGRFQ9HD47 186 aaPredicted RBP8.15□□□□□ -1.11
NIPBL-201ENST00000282516 MDC1Q14676 2089 aaKnown RBP8.14□□□□□ -1.11
NIPBL-201ENST00000282516 KIDINS220Q9ULH0 1771 aa8.14□□□□□ -1.11
NIPBL-201ENST00000282516 NAGAP17050 411 aa8.14□□□□□ -1.11
NIPBL-201ENST00000282516 SYN1P17600 705 aa8.14□□□□□ -1.11
NIPBL-201ENST00000282516 CST6Q15828 149 aa8.14□□□□□ -1.11
NIPBL-201ENST00000282516 BORCS6Q96GS4 357 aa8.14□□□□□ -1.11
NIPBL-201ENST00000282516 TIMD4Q96H15 378 aa8.14□□□□□ -1.11
NIPBL-201ENST00000282516 OR7D2Q96RA2 312 aa8.14□□□□□ -1.11
NIPBL-201ENST00000282516 SMOQ99835 787 aa8.14□□□□□ -1.11
NIPBL-201ENST00000282516 CBLCQ9ULV8 474 aa8.14□□□□□ -1.11
NIPBL-201ENST00000282516 KPTNQ9Y664 436 aa8.14□□□□□ -1.11
NIPBL-201ENST00000282516 PRAMEF4O60810 478 aa8.14□□□□□ -1.11
NIPBL-201ENST00000282516 CER1O95813 267 aa8.14□□□□□ -1.11
NIPBL-201ENST00000282516 WNT11O96014 354 aa8.14□□□□□ -1.11
NIPBL-201ENST00000282516 VEZF1Q14119 521 aa8.14□□□□□ -1.11
NIPBL-201ENST00000282516 KLHDC8BQ8IXV7 354 aa8.14□□□□□ -1.11
NIPBL-201ENST00000282516 DTWD1Q8N5C7 304 aa8.14□□□□□ -1.11
NIPBL-201ENST00000282516 TMEM104Q8NE00 496 aa8.14□□□□□ -1.11
NIPBL-201ENST00000282516 ACVR1CQ8NER5 493 aa8.14□□□□□ -1.11
NIPBL-201ENST00000282516 SGIP1Q9BQI5 828 aa8.14□□□□□ -1.11
NIPBL-201ENST00000282516 PIGMQ9H3S5 423 aa8.14□□□□□ -1.11
NIPBL-201ENST00000282516 ELOVL3Q9HB03 270 aa8.14□□□□□ -1.11
NIPBL-201ENST00000282516 KIAA1456Q9P272 454 aa8.14□□□□□ -1.11
NIPBL-201ENST00000282516 HEATR5BQ9P2D3 2071 aa8.14□□□□□ -1.11
NIPBL-201ENST00000282516 TMEM221A6NGB7 291 aa8.14□□□□□ -1.11
NIPBL-201ENST00000282516 ICAM2P13598 275 aa8.14□□□□□ -1.11
NIPBL-201ENST00000282516 KCTD11Q693B1 232 aa8.14□□□□□ -1.11
NIPBL-201ENST00000282516 H2BFWTQ7Z2G1 175 aa8.14□□□□□ -1.11
NIPBL-201ENST00000282516 SLC51BQ86UW2 128 aa8.14□□□□□ -1.11
NIPBL-201ENST00000282516 CISD2Q8N5K1 135 aaKnown RBP8.14□□□□□ -1.11
NIPBL-201ENST00000282516 INPP5KQ9BT40 448 aa8.14□□□□□ -1.11
NIPBL-201ENST00000282516 OR2M5A3KFT3 312 aa8.14□□□□□ -1.11
NIPBL-201ENST00000282516 NPIPB15A6NHN6 443 aaPredicted RBP8.14□□□□□ -1.11
NIPBL-201ENST00000282516 SMLR1H3BR10 107 aa8.14□□□□□ -1.11
NIPBL-201ENST00000282516 TGOLN2O43493 480 aa8.14□□□□□ -1.11
NIPBL-201ENST00000282516 UBL3O95164 117 aa8.14□□□□□ -1.11
NIPBL-201ENST00000282516 S100A8P05109 93 aa8.14□□□□□ -1.11
NIPBL-201ENST00000282516 TAS2R45P59539 299 aa8.14□□□□□ -1.11
NIPBL-201ENST00000282516 GPLD1P80108 840 aa8.14□□□□□ -1.11
NIPBL-201ENST00000282516 RELAQ04206 551 aa8.14□□□□□ -1.11
NIPBL-201ENST00000282516 PARP16Q8N5Y8 322 aa8.14□□□□□ -1.11
NIPBL-201ENST00000282516 SDR9C7Q8NEX9 313 aa8.14□□□□□ -1.11
NIPBL-201ENST00000282516 IL17FQ96PD4 163 aa8.14□□□□□ -1.11
NIPBL-201ENST00000282516 ULBP2Q9BZM5 246 aa8.14□□□□□ -1.11
NIPBL-201ENST00000282516 POFUT1Q9H488 388 aa8.14□□□□□ -1.11
NIPBL-201ENST00000282516 TRAV27A0A087WT01 109 aa8.14□□□□□ -1.11
NIPBL-201ENST00000282516 FZD7O75084 574 aa8.14□□□□□ -1.11
NIPBL-201ENST00000282516 RRADP55042 308 aa8.14□□□□□ -1.11
NIPBL-201ENST00000282516 TESK1Q15569 626 aa8.14□□□□□ -1.11
NIPBL-201ENST00000282516 CDC20BQ86Y33 519 aa8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms