RNA–Protein interactions for RNA: ENST00000281834.3

TNFSF4-201, Transcript of TNF superfamily member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFSF4, Length 3,470 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF4-201ENST00000281834 ELK1P19419 428 aa5.5□□□□□ -1.53
TNFSF4-201ENST00000281834 ENDOUP21128 410 aaKnown RBP5.5□□□□□ -1.53
TNFSF4-201ENST00000281834 TALDO1P37837 337 aa5.5□□□□□ -1.53
TNFSF4-201ENST00000281834 GBX2P52951 348 aaPredicted RBP5.5□□□□□ -1.53
TNFSF4-201ENST00000281834 CLDN6P56747 220 aa5.5□□□□□ -1.53
TNFSF4-201ENST00000281834 STARD6P59095 220 aa5.5□□□□□ -1.53
TNFSF4-201ENST00000281834 EGR4Q05215 589 aa5.5□□□□□ -1.53
TNFSF4-201ENST00000281834 KRR1Q13601 381 aaKnown RBP5.5□□□□□ -1.53
TNFSF4-201ENST00000281834 MEP1BQ16820 701 aa5.5□□□□□ -1.53
TNFSF4-201ENST00000281834 PRAMEF20Q5VT98 475 aa5.5□□□□□ -1.53
TNFSF4-201ENST00000281834 PAPD4Q6PIY7 484 aaKnown RBP5.5□□□□□ -1.53
TNFSF4-201ENST00000281834 OR4D9Q8NGE8 314 aa5.5□□□□□ -1.53
TNFSF4-201ENST00000281834 ADAMTS18Q8TE60 1221 aa5.5□□□□□ -1.53
TNFSF4-201ENST00000281834 CAPSLQ8WWF8 208 aa5.5□□□□□ -1.53
TNFSF4-201ENST00000281834 ZNF501Q96CX3 271 aaPredicted RBP5.5□□□□□ -1.53
TNFSF4-201ENST00000281834 TMCO6Q96DC7 493 aa5.5□□□□□ -1.53
TNFSF4-201ENST00000281834 CRB3Q9BUF7 120 aa5.5□□□□□ -1.53
TNFSF4-201ENST00000281834 SRRQ9GZT4 340 aa5.5□□□□□ -1.53
TNFSF4-201ENST00000281834 WDR76Q9H967 626 aa5.5□□□□□ -1.53
TNFSF4-201ENST00000281834 ENAMQ9NRM1 1142 aa5.5□□□□□ -1.53
TNFSF4-201ENST00000281834 CHRNA9Q9UGM1 479 aa5.5□□□□□ -1.53
TNFSF4-201ENST00000281834 MRTO4Q9UKD2 239 aaKnown RBP5.5□□□□□ -1.53
TNFSF4-201ENST00000281834 FER1L5A0AVI2 2057 aa5.5□□□□□ -1.53
TNFSF4-201ENST00000281834 ISPDA4D126 451 aa5.5□□□□□ -1.53
TNFSF4-201ENST00000281834 EIF1AYO14602 144 aaKnown RBP5.5□□□□□ -1.53
TNFSF4-201ENST00000281834 EEF1E1O43324 174 aaKnown RBP5.5□□□□□ -1.53
TNFSF4-201ENST00000281834 IL33O95760 270 aa5.5□□□□□ -1.53
TNFSF4-201ENST00000281834 GIMD1P0DJR0 217 aa5.5□□□□□ -1.53
TNFSF4-201ENST00000281834 PRKCAP17252 672 aa5.5□□□□□ -1.53
TNFSF4-201ENST00000281834 CD83Q01151 205 aa5.5□□□□□ -1.53
TNFSF4-201ENST00000281834 FHL1Q13642 323 aa5.5□□□□□ -1.53
TNFSF4-201ENST00000281834 QPRTQ15274 297 aa5.5□□□□□ -1.53
TNFSF4-201ENST00000281834 ETFDHQ16134 617 aa5.5□□□□□ -1.53
TNFSF4-201ENST00000281834 ZNF74Q16587 644 aa5.5□□□□□ -1.53
TNFSF4-201ENST00000281834 EXOSC6Q5RKV6 272 aaKnown RBP5.5□□□□□ -1.53
TNFSF4-201ENST00000281834 AGAP7PQ5VUJ5 663 aa5.5□□□□□ -1.53
TNFSF4-201ENST00000281834 OGFOD3Q6PK18 319 aa5.5□□□□□ -1.53
TNFSF4-201ENST00000281834 PAMR1Q6UXH9 720 aa5.5□□□□□ -1.53
TNFSF4-201ENST00000281834 D2HGDHQ8N465 521 aa5.5□□□□□ -1.53
TNFSF4-201ENST00000281834 ZNF485Q8NCK3 441 aa5.5□□□□□ -1.53
TNFSF4-201ENST00000281834 NPEPL1Q8NDH3 523 aa5.5□□□□□ -1.53
TNFSF4-201ENST00000281834 DNAAF1Q8NEP3 725 aa5.5□□□□□ -1.53
TNFSF4-201ENST00000281834 JSRP1Q96MG2 331 aaPredicted RBP5.5□□□□□ -1.53
TNFSF4-201ENST00000281834 C5orf34Q96MH7 638 aa5.5□□□□□ -1.53
TNFSF4-201ENST00000281834 TIMP4Q99727 224 aa5.5□□□□□ -1.53
TNFSF4-201ENST00000281834 ATF6BQ99941 703 aa5.5□□□□□ -1.53
TNFSF4-201ENST00000281834 TTYH2Q9BSA4 534 aa5.5□□□□□ -1.53
TNFSF4-201ENST00000281834 MMP25Q9NPA2 562 aa5.5□□□□□ -1.53
TNFSF4-201ENST00000281834 SLC22A11Q9NSA0 550 aa5.5□□□□□ -1.53
TNFSF4-201ENST00000281834 RXFP3Q9NSD7 469 aa5.5□□□□□ -1.53
TNFSF4-201ENST00000281834 MRPS18AQ9NVS2 196 aaKnown RBP5.5□□□□□ -1.53
TNFSF4-201ENST00000281834 OCIAD1Q9NX40 245 aa5.5□□□□□ -1.53
TNFSF4-201ENST00000281834 NKIRAS2Q9NYR9 191 aa5.5□□□□□ -1.53
TNFSF4-201ENST00000281834 SUSD2Q9UGT4 822 aa5.5□□□□□ -1.53
TNFSF4-201ENST00000281834 BOLA1Q9Y3E2 137 aa5.5□□□□□ -1.53
TNFSF4-201ENST00000281834 A3GALT2U3KPV4 340 aa5.5□□□□□ -1.53
TNFSF4-201ENST00000281834 LOC400499M0QZD8 3231 aa5.5□□□□□ -1.53
TNFSF4-201ENST00000281834 IQCMA0A1B0GVH7 501 aa5.5□□□□□ -1.53
TNFSF4-201ENST00000281834 PPM1BO75688 479 aa5.5□□□□□ -1.53
TNFSF4-201ENST00000281834 PTTG1O95997 202 aa5.5□□□□□ -1.53
TNFSF4-201ENST00000281834 KRT8P05787 483 aa5.5□□□□□ -1.53
TNFSF4-201ENST00000281834 CD14P08571 375 aa5.5□□□□□ -1.53
TNFSF4-201ENST00000281834 SPARCP09486 303 aa5.5□□□□□ -1.53
TNFSF4-201ENST00000281834 PTHLHP12272 177 aa5.5□□□□□ -1.53
TNFSF4-201ENST00000281834 IL11P20809 199 aa5.5□□□□□ -1.53
TNFSF4-201ENST00000281834 SRP9P49458 86 aaKnown RBP5.5□□□□□ -1.53
TNFSF4-201ENST00000281834 GPLD1P80108 840 aa5.5□□□□□ -1.53
TNFSF4-201ENST00000281834 IGLV3-21P80748 117 aaPredicted RBP5.5□□□□□ -1.53
TNFSF4-201ENST00000281834 MRPS15P82914 257 aaKnown RBP5.5□□□□□ -1.53
TNFSF4-201ENST00000281834 FOXK1P85037 733 aa5.5□□□□□ -1.53
TNFSF4-201ENST00000281834 TCEAL6Q6IPX3 200 aa5.5□□□□□ -1.53
TNFSF4-201ENST00000281834 LCN10Q6JVE6 187 aa5.5□□□□□ -1.53
TNFSF4-201ENST00000281834 SFXN4Q6P4A7 337 aa5.5□□□□□ -1.53
TNFSF4-201ENST00000281834 RAB43Q86YS6 212 aa5.5□□□□□ -1.53
TNFSF4-201ENST00000281834 GRAMD2AQ8IUY3 354 aa5.5□□□□□ -1.53
TNFSF4-201ENST00000281834 ARIH2OSQ8N7S6 290 aa5.5□□□□□ -1.53
TNFSF4-201ENST00000281834 ZSCAN1Q8NBB4 408 aa5.5□□□□□ -1.53
TNFSF4-201ENST00000281834 OR5H6Q8NGV6 325 aa5.5□□□□□ -1.53
TNFSF4-201ENST00000281834 TRMT10AQ8TBZ6 339 aaKnown RBP5.5□□□□□ -1.53
TNFSF4-201ENST00000281834 TCEAL3Q969E4 200 aa5.5□□□□□ -1.53
TNFSF4-201ENST00000281834 DERL3Q96Q80 235 aa5.5□□□□□ -1.53
TNFSF4-201ENST00000281834 COQ7Q99807 217 aa5.5□□□□□ -1.53
TNFSF4-201ENST00000281834 ANKRD10Q9NXR5 420 aa5.5□□□□□ -1.53
TNFSF4-201ENST00000281834 NCDNQ9UBB6 729 aa5.5□□□□□ -1.53
TNFSF4-201ENST00000281834 LAMP5Q9UJQ1 280 aa5.5□□□□□ -1.53
TNFSF4-201ENST00000281834 RARRES3Q9UL19 164 aa5.5□□□□□ -1.53
TNFSF4-201ENST00000281834 RPH3AQ9Y2J0 694 aaPredicted RBP5.5□□□□□ -1.53
TNFSF4-201ENST00000281834 KLHDC2Q9Y2U9 406 aa5.5□□□□□ -1.53
TNFSF4-201ENST00000281834 SVILO95425 2214 aa5.5□□□□□ -1.53
TNFSF4-201ENST00000281834 TCRBV16S1A1N1A0A5B0 115 aa5.49□□□□□ -1.53
TNFSF4-201ENST00000281834 PRR32B1ATL7 298 aa5.49□□□□□ -1.53
TNFSF4-201ENST00000281834 SUSD5O60279 629 aa5.49□□□□□ -1.53
TNFSF4-201ENST00000281834 SLC16A7O60669 478 aa5.49□□□□□ -1.53
TNFSF4-201ENST00000281834 F10P00742 488 aa5.49□□□□□ -1.53
TNFSF4-201ENST00000281834 MAS1P04201 325 aa5.49□□□□□ -1.53
TNFSF4-201ENST00000281834 IGKV3-11P04433 115 aa5.49□□□□□ -1.53
TNFSF4-201ENST00000281834 EIF4EP06730 217 aaKnown RBP5.49□□□□□ -1.53
TNFSF4-201ENST00000281834 CELA2AP08217 269 aa5.49□□□□□ -1.53
TNFSF4-201ENST00000281834 CD3GP09693 182 aa5.49□□□□□ -1.53
TNFSF4-201ENST00000281834 F8A1P23610 371 aa5.49□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms