RNA–Protein interactions for RNA: ENST00000271850.11

TPM3-201, Transcript of tropomyosin 3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene TPM3, Length 1,219 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-201ENST00000271850 EPB41L3Q9Y2J2 1087 aaPredicted RBP7.76□□□□□ -1.17
TPM3-201ENST00000271850 V9GYY5 206 aaPredicted RBP7.76□□□□□ -1.17
TPM3-201ENST00000271850 IGKV1D-42A0A075B6H8 117 aa7.75□□□□□ -1.17
TPM3-201ENST00000271850 LOC100289279A0A1B0GTE1 492 aa7.75□□□□□ -1.17
TPM3-201ENST00000271850 SNNO75324 88 aaPredicted RBP7.75□□□□□ -1.17
TPM3-201ENST00000271850 BCHEP06276 602 aa7.75□□□□□ -1.17
TPM3-201ENST00000271850 GPIP06744 558 aa7.75□□□□□ -1.17
TPM3-201ENST00000271850 DBIP07108 87 aaKnown RBP7.75□□□□□ -1.17
TPM3-201ENST00000271850 CSF3P09919 207 aa7.75□□□□□ -1.17
TPM3-201ENST00000271850 OR4A8P0C604 315 aa7.75□□□□□ -1.17
TPM3-201ENST00000271850 PNMTP11086 282 aa7.75□□□□□ -1.17
TPM3-201ENST00000271850 IL7RP16871 459 aa7.75□□□□□ -1.17
TPM3-201ENST00000271850 THBS2P35442 1172 aa7.75□□□□□ -1.17
TPM3-201ENST00000271850 SERPINF1P36955 418 aa7.75□□□□□ -1.17
TPM3-201ENST00000271850 PDLIM4P50479 330 aa7.75□□□□□ -1.17
TPM3-201ENST00000271850 EFNB3Q15768 340 aa7.75□□□□□ -1.17
TPM3-201ENST00000271850 GSTA3Q16772 222 aa7.75□□□□□ -1.17
TPM3-201ENST00000271850 RNF220Q5VTB9 566 aa7.75□□□□□ -1.17
TPM3-201ENST00000271850 C1orf140Q5VVS0 124 aa7.75□□□□□ -1.17
TPM3-201ENST00000271850 NIPAL3Q6P499 406 aa7.75□□□□□ -1.17
TPM3-201ENST00000271850 NHLRC1Q6VVB1 395 aa7.75□□□□□ -1.17
TPM3-201ENST00000271850 ZNF621Q6ZSS3 439 aa7.75□□□□□ -1.17
TPM3-201ENST00000271850 DEPDC4Q8N2C3 294 aa7.75□□□□□ -1.17
TPM3-201ENST00000271850 MREGQ8N565 214 aa7.75□□□□□ -1.17
TPM3-201ENST00000271850 POMGNT2Q8NAT1 580 aa7.75□□□□□ -1.17
TPM3-201ENST00000271850 OR9I1Q8NGQ6 314 aa7.75□□□□□ -1.17
TPM3-201ENST00000271850 OR52P1PQ8NH57 321 aa7.75□□□□□ -1.17
TPM3-201ENST00000271850 PMM1Q92871 262 aa7.75□□□□□ -1.17
TPM3-201ENST00000271850 KTI12Q96EK9 354 aaPredicted RBP7.75□□□□□ -1.17
TPM3-201ENST00000271850 TMEM19Q96HH6 336 aa7.75□□□□□ -1.17
TPM3-201ENST00000271850 MAELQ96JY0 434 aaKnown RBP7.75□□□□□ -1.17
TPM3-201ENST00000271850 ZNF75AQ96N20 296 aa7.75□□□□□ -1.17
TPM3-201ENST00000271850 OR52E6Q96RD3 313 aa7.75□□□□□ -1.17
TPM3-201ENST00000271850 DOK1Q99704 481 aa7.75□□□□□ -1.17
TPM3-201ENST00000271850 WFDC6Q9BQY6 131 aa7.75□□□□□ -1.17
TPM3-201ENST00000271850 KATNB1Q9BVA0 655 aa7.75□□□□□ -1.17
TPM3-201ENST00000271850 SHARPINQ9H0F6 387 aa7.75□□□□□ -1.17
TPM3-201ENST00000271850 PIF1Q9H611 641 aa7.75□□□□□ -1.17
TPM3-201ENST00000271850 SSU72Q9NP77 194 aaKnown RBP7.75□□□□□ -1.17
TPM3-201ENST00000271850 ADPRHL2Q9NX46 363 aa7.75□□□□□ -1.17
TPM3-201ENST00000271850 LPAR3Q9UBY5 353 aa7.75□□□□□ -1.17
TPM3-201ENST00000271850 TRRAPQ9Y4A5 3859 aa7.75□□□□□ -1.17
TPM3-201ENST00000271850 A8MVM7 634 aa7.74□□□□□ -1.17
TPM3-201ENST00000271850 LYNX1G3V0Z9 82 aa7.74□□□□□ -1.17
TPM3-201ENST00000271850 RPL36A-HNRNPH2H7BZ11 118 aa7.74□□□□□ -1.17
TPM3-201ENST00000271850 NDUFS8O00217 210 aa7.74□□□□□ -1.17
TPM3-201ENST00000271850 SEC14L2O76054 403 aa7.74□□□□□ -1.17
TPM3-201ENST00000271850 STAMBPO95630 424 aa7.74□□□□□ -1.17
TPM3-201ENST00000271850 WNT11O96014 354 aa7.74□□□□□ -1.17
TPM3-201ENST00000271850 LYNX1P0DP58 116 aa7.74□□□□□ -1.17
TPM3-201ENST00000271850 NR2F1P10589 423 aa7.74□□□□□ -1.17
TPM3-201ENST00000271850 APEHP13798 732 aaKnown RBP7.74□□□□□ -1.17
TPM3-201ENST00000271850 ZNF23P17027 643 aa7.74□□□□□ -1.17
TPM3-201ENST00000271850 SRD5A1P18405 259 aa7.74□□□□□ -1.17
TPM3-201ENST00000271850 CD33P20138 364 aa7.74□□□□□ -1.17
TPM3-201ENST00000271850 HTR2AP28223 471 aa7.74□□□□□ -1.17
TPM3-201ENST00000271850 THBS4P35443 961 aa7.74□□□□□ -1.17
TPM3-201ENST00000271850 GZMKP49863 264 aa7.74□□□□□ -1.17
TPM3-201ENST00000271850 MAP2K6P52564 334 aa7.74□□□□□ -1.17
TPM3-201ENST00000271850 TGFBR3Q03167 851 aa7.74□□□□□ -1.17
TPM3-201ENST00000271850 CHRNB3Q05901 458 aa7.74□□□□□ -1.17
TPM3-201ENST00000271850 TRIP10Q15642 601 aa7.74□□□□□ -1.17
TPM3-201ENST00000271850 KRT71Q3SY84 523 aa7.74□□□□□ -1.17
TPM3-201ENST00000271850 SLC9B1Q4ZJI4 515 aa7.74□□□□□ -1.17
TPM3-201ENST00000271850 LIN52Q52LA3 116 aa7.74□□□□□ -1.17
TPM3-201ENST00000271850 WBP2NLQ6ICG8 309 aa7.74□□□□□ -1.17
TPM3-201ENST00000271850 FAM166AQ6J272 317 aa7.74□□□□□ -1.17
TPM3-201ENST00000271850 WDR93Q6P2C0 686 aa7.74□□□□□ -1.17
TPM3-201ENST00000271850 VHLLQ6RSH7 139 aa7.74□□□□□ -1.17
TPM3-201ENST00000271850 SPATA19Q7Z5L4 167 aa7.74□□□□□ -1.17
TPM3-201ENST00000271850 MSRB3Q8IXL7 192 aa7.74□□□□□ -1.17
TPM3-201ENST00000271850 CDK20Q8IZL9 346 aa7.74□□□□□ -1.17
TPM3-201ENST00000271850 TMEM123Q8N131 208 aa7.74□□□□□ -1.17
TPM3-201ENST00000271850 CADM2Q8N3J6 435 aa7.74□□□□□ -1.17
TPM3-201ENST00000271850 VPS37AQ8NEZ2 397 aa7.74□□□□□ -1.17
TPM3-201ENST00000271850 NUP37Q8NFH4 326 aa7.74□□□□□ -1.17
TPM3-201ENST00000271850 MAGEE2Q8TD90 523 aaPredicted RBP7.74□□□□□ -1.17
TPM3-201ENST00000271850 MAL2Q969L2 176 aa7.74□□□□□ -1.17
TPM3-201ENST00000271850 PIMREGQ9BSJ6 248 aa7.74□□□□□ -1.17
TPM3-201ENST00000271850 LINC00470Q9BZP3 86 aa7.74□□□□□ -1.17
TPM3-201ENST00000271850 OBP2BQ9NPH6 170 aa7.74□□□□□ -1.17
TPM3-201ENST00000271850 TMEM45AQ9NWC5 275 aa7.74□□□□□ -1.17
TPM3-201ENST00000271850 ZNF224Q9NZL3 707 aa7.74□□□□□ -1.17
TPM3-201ENST00000271850 KCNS2Q9ULS6 477 aa7.74□□□□□ -1.17
TPM3-201ENST00000271850 PMF1-BGLAPU3KQ54 211 aa7.74□□□□□ -1.17
TPM3-201ENST00000271850 IGHV2OR16-5A0A0B4J2B6 119 aa7.73□□□□□ -1.17
TPM3-201ENST00000271850 LOC390937A0A1W2PQ73 354 aa7.73□□□□□ -1.17
TPM3-201ENST00000271850 B9A039 149 aa7.73□□□□□ -1.17
TPM3-201ENST00000271850 ZNF587BE7ETH6 402 aa7.73□□□□□ -1.17
TPM3-201ENST00000271850 RFXANKO14593 260 aa7.73□□□□□ -1.17
TPM3-201ENST00000271850 TM9SF1O15321 606 aa7.73□□□□□ -1.17
TPM3-201ENST00000271850 TRAF3IP2O43734 574 aaPredicted RBP7.73□□□□□ -1.17
TPM3-201ENST00000271850 TPST2O60704 377 aa7.73□□□□□ -1.17
TPM3-201ENST00000271850 PDE5AO76074 875 aa7.73□□□□□ -1.17
TPM3-201ENST00000271850 HPRP00739 348 aa7.73□□□□□ -1.17
TPM3-201ENST00000271850 TACSTD2P09758 323 aa7.73□□□□□ -1.17
TPM3-201ENST00000271850 ZCCHC18P0CG32 403 aa7.73□□□□□ -1.17
TPM3-201ENST00000271850 HLA-DOBP13765 273 aa7.73□□□□□ -1.17
TPM3-201ENST00000271850 CXCR1P25024 350 aa7.73□□□□□ -1.17
TPM3-201ENST00000271850 GIFP27352 417 aa7.73□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms