RNA–Protein interactions for RNA: ENST00000265745.13

VPS41-201, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 2

Gene VPS41, Length 769 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-201ENST00000265745 CACNG6Q9BXT2 260 aa8.51□□□□□ -1.05
VPS41-201ENST00000265745 CACYBPQ9HB71 228 aaKnown RBP8.51□□□□□ -1.05
VPS41-201ENST00000265745 TMEM45AQ9NWC5 275 aa8.51□□□□□ -1.05
VPS41-201ENST00000265745 POU2F3Q9UKI9 436 aa8.51□□□□□ -1.05
VPS41-201ENST00000265745 RASD1Q9Y272 281 aa8.51□□□□□ -1.05
VPS41-201ENST00000265745 AMDHD2Q9Y303 409 aa8.51□□□□□ -1.05
VPS41-201ENST00000265745 GMEB1Q9Y692 573 aa8.51□□□□□ -1.05
VPS41-201ENST00000265745 KIAA1324LA8MWY0 1029 aaPredicted RBP8.5□□□□□ -1.05
VPS41-201ENST00000265745 POLR3GO15318 223 aaPredicted RBP8.5□□□□□ -1.05
VPS41-201ENST00000265745 SSX4O60224 188 aa8.5□□□□□ -1.05
VPS41-201ENST00000265745 WNT11O96014 354 aa8.5□□□□□ -1.05
VPS41-201ENST00000265745 CDH2P19022 906 aaPredicted RBP8.5□□□□□ -1.05
VPS41-201ENST00000265745 PRKAR1BP31321 381 aa8.5□□□□□ -1.05
VPS41-201ENST00000265745 SELENOPP49908 381 aa8.5□□□□□ -1.05
VPS41-201ENST00000265745 FABP6P51161 128 aa8.5□□□□□ -1.05
VPS41-201ENST00000265745 STX1BP61266 288 aa8.5□□□□□ -1.05
VPS41-201ENST00000265745 LGALS3BPQ08380 585 aa8.5□□□□□ -1.05
VPS41-201ENST00000265745 NRF1Q16656 503 aa8.5□□□□□ -1.05
VPS41-201ENST00000265745 HIKESHIQ53FT3 197 aa8.5□□□□□ -1.05
VPS41-201ENST00000265745 PAGE3Q5JUK9 113 aa8.5□□□□□ -1.05
VPS41-201ENST00000265745 GCNT6Q5T4J0 391 aa8.5□□□□□ -1.05
VPS41-201ENST00000265745 REEP3Q6NUK4 255 aa8.5□□□□□ -1.05
VPS41-201ENST00000265745 C6orf89Q6UWU4 347 aa8.5□□□□□ -1.05
VPS41-201ENST00000265745 ABHD12BQ7Z5M8 362 aaPredicted RBP8.5□□□□□ -1.05
VPS41-201ENST00000265745 FBXL14Q8N1E6 418 aa8.5□□□□□ -1.05
VPS41-201ENST00000265745 C10orf111Q8N326 155 aa8.5□□□□□ -1.05
VPS41-201ENST00000265745 GOLGA6L1Q8N7Z2 621 aa8.5□□□□□ -1.05
VPS41-201ENST00000265745 LSMEM1Q8N8F7 131 aa8.5□□□□□ -1.05
VPS41-201ENST00000265745 OR10H5Q8NGA6 315 aa8.5□□□□□ -1.05
VPS41-201ENST00000265745 LRRC8CQ8TDW0 803 aa8.5□□□□□ -1.05
VPS41-201ENST00000265745 ANAPC16Q96DE5 110 aa8.5□□□□□ -1.05
VPS41-201ENST00000265745 ADAD1Q96M93 576 aaKnown RBP8.5□□□□□ -1.05
VPS41-201ENST00000265745 FKRPQ9H9S5 495 aa8.5□□□□□ -1.05
VPS41-201ENST00000265745 OBP2BQ9NPH6 170 aa8.5□□□□□ -1.05
VPS41-201ENST00000265745 CCDC167Q9P0B6 97 aa8.5□□□□□ -1.05
VPS41-201ENST00000265745 VAPAQ9P0L0 249 aa8.5□□□□□ -1.05
VPS41-201ENST00000265745 SONP18583 2426 aaKnown RBP8.5□□□□□ -1.05
VPS41-201ENST00000265745 ALPK2Q86TB3 2170 aa8.49□□□□□ -1.05
VPS41-201ENST00000265745 IGHV4-30-2A0A087WSY4 118 aa8.49□□□□□ -1.05
VPS41-201ENST00000265745 TRBV5-3A0A0A0MS03 114 aa8.49□□□□□ -1.05
VPS41-201ENST00000265745 LOC102725191A0A1B0GVB3 256 aa8.49□□□□□ -1.05
VPS41-201ENST00000265745 OR6C65A6NJZ3 312 aa8.49□□□□□ -1.05
VPS41-201ENST00000265745 ELOA3DA6NLF2 546 aaPredicted RBP8.49□□□□□ -1.05
VPS41-201ENST00000265745 C5orf58C9J3I9 102 aa8.49□□□□□ -1.05
VPS41-201ENST00000265745 NR5A2O00482 541 aa8.49□□□□□ -1.05
VPS41-201ENST00000265745 TPST1O60507 370 aa8.49□□□□□ -1.05
VPS41-201ENST00000265745 FZD7O75084 574 aa8.49□□□□□ -1.05
VPS41-201ENST00000265745 CRLF1O75462 422 aa8.49□□□□□ -1.05
VPS41-201ENST00000265745 KRT33AO76009 404 aa8.49□□□□□ -1.05
VPS41-201ENST00000265745 ZNF432O94892 652 aa8.49□□□□□ -1.05
VPS41-201ENST00000265745 AHSA1O95433 338 aa8.49□□□□□ -1.05
VPS41-201ENST00000265745 LGI1O95970 557 aa8.49□□□□□ -1.05
VPS41-201ENST00000265745 GHRHP01286 108 aa8.49□□□□□ -1.05
VPS41-201ENST00000265745 ARAFP10398 606 aa8.49□□□□□ -1.05
VPS41-201ENST00000265745 PNMTP11086 282 aa8.49□□□□□ -1.05
VPS41-201ENST00000265745 GPX2P18283 190 aa8.49□□□□□ -1.05
VPS41-201ENST00000265745 PPIBP23284 216 aaKnown RBP8.49□□□□□ -1.05
VPS41-201ENST00000265745 HTR2AP28223 471 aa8.49□□□□□ -1.05
VPS41-201ENST00000265745 APOBEC3AP31941 199 aaPredicted RBP8.49□□□□□ -1.05
VPS41-201ENST00000265745 RPS5P46782 204 aaKnown RBP8.49□□□□□ -1.05
VPS41-201ENST00000265745 AQP5P55064 265 aa8.49□□□□□ -1.05
VPS41-201ENST00000265745 CDK6Q00534 326 aa8.49□□□□□ -1.05
VPS41-201ENST00000265745 DMTNQ08495 405 aa8.49□□□□□ -1.05
VPS41-201ENST00000265745 RAB35Q15286 201 aa8.49□□□□□ -1.05
VPS41-201ENST00000265745 ADRM1Q16186 407 aa8.49□□□□□ -1.05
VPS41-201ENST00000265745 ELOA3BQ3SY89 546 aa8.49□□□□□ -1.05
VPS41-201ENST00000265745 DHRS4L2Q6PKH6 230 aa8.49□□□□□ -1.05
VPS41-201ENST00000265745 LINGO2Q7L985 606 aa8.49□□□□□ -1.05
VPS41-201ENST00000265745 COMTD1Q86VU5 262 aa8.49□□□□□ -1.05
VPS41-201ENST00000265745 KDM8Q8N371 416 aa8.49□□□□□ -1.05
VPS41-201ENST00000265745 ELOA3Q8NG57 546 aa8.49□□□□□ -1.05
VPS41-201ENST00000265745 OR1K1Q8NGR3 316 aa8.49□□□□□ -1.05
VPS41-201ENST00000265745 NFKBIDQ8NI38 313 aa8.49□□□□□ -1.05
VPS41-201ENST00000265745 BCL2L2Q92843 193 aaPredicted RBP8.49□□□□□ -1.05
VPS41-201ENST00000265745 TAAR8Q969N4 342 aa8.49□□□□□ -1.05
VPS41-201ENST00000265745 SLC25A36Q96CQ1 311 aa8.49□□□□□ -1.05
VPS41-201ENST00000265745 ATP6V1G3Q96LB4 118 aa8.49□□□□□ -1.05
VPS41-201ENST00000265745 OXGR1Q96P68 337 aa8.49□□□□□ -1.05
VPS41-201ENST00000265745 ZNF317Q96PQ6 595 aaPredicted RBP8.49□□□□□ -1.05
VPS41-201ENST00000265745 RHNO1Q9BSD3 238 aa8.49□□□□□ -1.05
VPS41-201ENST00000265745 IKZF5Q9H5V7 419 aa8.49□□□□□ -1.05
VPS41-201ENST00000265745 C12orf10Q9HB07 376 aa8.49□□□□□ -1.05
VPS41-201ENST00000265745 B3GAT1Q9P2W7 334 aa8.49□□□□□ -1.05
VPS41-201ENST00000265745 ADAM21Q9UKJ8 722 aa8.49□□□□□ -1.05
VPS41-201ENST00000265745 ATP23Q9Y6H3 246 aa8.49□□□□□ -1.05
VPS41-201ENST00000265745 DNHD1Q96M86 4753 aa8.48□□□□□ -1.05
VPS41-201ENST00000265745 IGKV1D-42A0A075B6H8 117 aa8.48□□□□□ -1.05
VPS41-201ENST00000265745 A0A096LNT2 108 aa8.48□□□□□ -1.05
VPS41-201ENST00000265745 IGHV1-18A0A0C4DH31 117 aa8.48□□□□□ -1.05
VPS41-201ENST00000265745 A0A1B0GWA3 101 aa8.48□□□□□ -1.05
VPS41-201ENST00000265745 ZNF587BE7ETH6 402 aa8.48□□□□□ -1.05
VPS41-201ENST00000265745 ATP6V1G2-DDX39BF2Z307 99 aa8.48□□□□□ -1.05
VPS41-201ENST00000265745 H7C417 338 aa8.48□□□□□ -1.05
VPS41-201ENST00000265745 TLX2O43763 284 aaPredicted RBP8.48□□□□□ -1.05
VPS41-201ENST00000265745 CD5LO43866 347 aa8.48□□□□□ -1.05
VPS41-201ENST00000265745 OR2T1O43869 369 aa8.48□□□□□ -1.05
VPS41-201ENST00000265745 UPK3AO75631 287 aa8.48□□□□□ -1.05
VPS41-201ENST00000265745 TP53P04637 393 aaPredicted RBP8.48□□□□□ -1.05
VPS41-201ENST00000265745 ZNF43P17038 809 aa8.48□□□□□ -1.05
VPS41-201ENST00000265745 PAX7P23759 505 aa8.48□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms