RNA–Protein interactions for RNA: ENST00000264883.7

NUP54-201, Transcript of nucleoporin 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP54, Length 2,367 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-201ENST00000264883 C4orf46Q504U0 113 aa12.05□□□□□ -0.48
NUP54-201ENST00000264883 BEX5Q5H9J7 111 aa12.05□□□□□ -0.48
NUP54-201ENST00000264883 KRT77Q7Z794 578 aa12.05□□□□□ -0.48
NUP54-201ENST00000264883 ADIPOR2Q86V24 386 aa12.05□□□□□ -0.48
NUP54-201ENST00000264883 BEST3Q8N1M1 668 aa12.05□□□□□ -0.48
NUP54-201ENST00000264883 KREMEN2Q8NCW0 462 aa12.05□□□□□ -0.48
NUP54-201ENST00000264883 GTF3AQ92664 365 aaKnown RBP12.05□□□□□ -0.48
NUP54-201ENST00000264883 DIO2Q92813 273 aa12.05□□□□□ -0.48
NUP54-201ENST00000264883 ARL11Q969Q4 196 aa12.05□□□□□ -0.48
NUP54-201ENST00000264883 SPSB2Q99619 263 aa12.05□□□□□ -0.48
NUP54-201ENST00000264883 MFRPQ9BY79 579 aa12.05□□□□□ -0.48
NUP54-201ENST00000264883 KLHL28Q9NXS3 571 aa12.05□□□□□ -0.48
NUP54-201ENST00000264883 MYO10Q9HD67 2058 aa12.05□□□□□ -0.48
NUP54-201ENST00000264883 PHYHO14832 338 aa12.05□□□□□ -0.48
NUP54-201ENST00000264883 VEGFDO43915 354 aa12.05□□□□□ -0.48
NUP54-201ENST00000264883 CLN5O75503 358 aa12.05□□□□□ -0.48
NUP54-201ENST00000264883 PRKRAO75569 313 aaKnown RBP12.05□□□□□ -0.48
NUP54-201ENST00000264883 CHRM4P08173 479 aa12.05□□□□□ -0.48
NUP54-201ENST00000264883 P2RY4P51582 365 aa12.05□□□□□ -0.48
NUP54-201ENST00000264883 ZNF311Q5JNZ3 666 aa12.05□□□□□ -0.48
NUP54-201ENST00000264883 GLT8D1Q68CQ7 371 aa12.05□□□□□ -0.48
NUP54-201ENST00000264883 ZNF813Q6ZN06 617 aa12.05□□□□□ -0.48
NUP54-201ENST00000264883 SYNPRQ8TBG9 265 aa12.05□□□□□ -0.48
NUP54-201ENST00000264883 TCTEX1D2Q8WW35 142 aa12.05□□□□□ -0.48
NUP54-201ENST00000264883 ING5Q8WYH8 240 aa12.05□□□□□ -0.48
NUP54-201ENST00000264883 SMPDL3BQ92485 455 aa12.05□□□□□ -0.48
NUP54-201ENST00000264883 ZC3H10Q96K80 434 aaKnown RBP12.05□□□□□ -0.48
NUP54-201ENST00000264883 RBM14Q96PK6 669 aaKnown RBP12.05□□□□□ -0.48
NUP54-201ENST00000264883 HCAR1Q9BXC0 346 aa12.05□□□□□ -0.48
NUP54-201ENST00000264883 UBQLN3Q9H347 655 aa12.05□□□□□ -0.48
NUP54-201ENST00000264883 GLIPR2Q9H4G4 154 aa12.05□□□□□ -0.48
NUP54-201ENST00000264883 TMEM231Q9H6L2 316 aa12.05□□□□□ -0.48
NUP54-201ENST00000264883 NRIP3Q9NQ35 241 aa12.05□□□□□ -0.48
NUP54-201ENST00000264883 ZNF230Q9UIE0 474 aaPredicted RBP12.05□□□□□ -0.48
NUP54-201ENST00000264883 ST6GALNAC2Q9UJ37 374 aa12.05□□□□□ -0.48
NUP54-201ENST00000264883 TNFSF18Q9UNG2 199 aa12.05□□□□□ -0.48
NUP54-201ENST00000264883 MYO7AQ13402 2215 aa12.04□□□□□ -0.48
NUP54-201ENST00000264883 ANKRD61A6NGH8 418 aa12.04□□□□□ -0.48
NUP54-201ENST00000264883 NRG2O14511 850 aaPredicted RBP12.04□□□□□ -0.48
NUP54-201ENST00000264883 FRS3O43559 492 aa12.04□□□□□ -0.48
NUP54-201ENST00000264883 OR2T1O43869 369 aa12.04□□□□□ -0.48
NUP54-201ENST00000264883 GKN3PP0CG01 181 aa12.04□□□□□ -0.48
NUP54-201ENST00000264883 DPP4P27487 766 aa12.04□□□□□ -0.48
NUP54-201ENST00000264883 TAS2R38P59533 333 aa12.04□□□□□ -0.48
NUP54-201ENST00000264883 ZNF85Q03923 595 aa12.04□□□□□ -0.48
NUP54-201ENST00000264883 TEAD2Q15562 447 aa12.04□□□□□ -0.48
NUP54-201ENST00000264883 PLEKHN1Q494U1 663 aaPredicted RBP12.04□□□□□ -0.48
NUP54-201ENST00000264883 PRPF38BQ5VTL8 546 aaKnown RBP12.04□□□□□ -0.48
NUP54-201ENST00000264883 FAM46CQ5VWP2 391 aa12.04□□□□□ -0.48
NUP54-201ENST00000264883 NRMQ8IXM6 262 aa12.04□□□□□ -0.48
NUP54-201ENST00000264883 PAQR8Q8TEZ7 354 aa12.04□□□□□ -0.48
NUP54-201ENST00000264883 KLK6Q92876 244 aa12.04□□□□□ -0.48
NUP54-201ENST00000264883 KISS1RQ969F8 398 aaPredicted RBP12.04□□□□□ -0.48
NUP54-201ENST00000264883 OR14A2Q96R54 314 aa12.04□□□□□ -0.48
NUP54-201ENST00000264883 BBS4Q96RK4 519 aa12.04□□□□□ -0.48
NUP54-201ENST00000264883 OR2AG1Q9H205 316 aa12.04□□□□□ -0.48
NUP54-201ENST00000264883 UQCC1Q9NVA1 299 aa12.04□□□□□ -0.48
NUP54-201ENST00000264883 C2orf42Q9NWW7 574 aa12.04□□□□□ -0.48
NUP54-201ENST00000264883 ASF1AQ9Y294 204 aa12.04□□□□□ -0.48
NUP54-201ENST00000264883 KIAA1549LQ6ZVL6 1849 aa12.04□□□□□ -0.48
NUP54-201ENST00000264883 PLXND1Q9Y4D7 1925 aa12.04□□□□□ -0.48
NUP54-201ENST00000264883 A0A1W2PPE3 182 aa12.04□□□□□ -0.48
NUP54-201ENST00000264883 RTCAO00442 366 aaKnown RBP12.04□□□□□ -0.48
NUP54-201ENST00000264883 GPR37O15354 613 aa12.04□□□□□ -0.48
NUP54-201ENST00000264883 TMPRSS11DO60235 418 aa12.04□□□□□ -0.48
NUP54-201ENST00000264883 FADS1O60427 444 aa12.04□□□□□ -0.48
NUP54-201ENST00000264883 CLEC3AO75596 197 aa12.04□□□□□ -0.48
NUP54-201ENST00000264883 LRG1P02750 347 aa12.04□□□□□ -0.48
NUP54-201ENST00000264883 PPP2CBP62714 309 aa12.04□□□□□ -0.48
NUP54-201ENST00000264883 PPP2CAP67775 309 aa12.04□□□□□ -0.48
NUP54-201ENST00000264883 CDNFQ49AH0 187 aa12.04□□□□□ -0.48
NUP54-201ENST00000264883 TMEM35AQ53FP2 167 aa12.04□□□□□ -0.48
NUP54-201ENST00000264883 KLHL26Q53HC5 615 aa12.04□□□□□ -0.48
NUP54-201ENST00000264883 PLPP4Q5VZY2 271 aa12.04□□□□□ -0.48
NUP54-201ENST00000264883 TMEM25Q86YD3 366 aa12.04□□□□□ -0.48
NUP54-201ENST00000264883 NKAIN4Q8IVV8 208 aa12.04□□□□□ -0.48
NUP54-201ENST00000264883 GTPBP8Q8N3Z3 284 aaPredicted RBP12.04□□□□□ -0.48
NUP54-201ENST00000264883 C15orf54Q8N8G6 183 aa12.04□□□□□ -0.48
NUP54-201ENST00000264883 OR4C16Q8NGL9 310 aa12.04□□□□□ -0.48
NUP54-201ENST00000264883 DUSP19Q8WTR2 217 aa12.04□□□□□ -0.48
NUP54-201ENST00000264883 EGLN1Q9GZT9 426 aa12.04□□□□□ -0.48
NUP54-201ENST00000264883 OR52A5Q9H2C5 316 aa12.04□□□□□ -0.48
NUP54-201ENST00000264883 SMCO4Q9NRQ5 59 aa12.04□□□□□ -0.48
NUP54-201ENST00000264883 RANBP2P49792 3224 aaKnown RBP12.03□□□□□ -0.48
NUP54-201ENST00000264883 A0A0A6YYD5 115 aa12.03□□□□□ -0.48
NUP54-201ENST00000264883 A0A1B0GV90 55 aa12.03□□□□□ -0.48
NUP54-201ENST00000264883 OR5H14A6NHG9 310 aa12.03□□□□□ -0.48
NUP54-201ENST00000264883 IFITM5A6NNB3 132 aa12.03□□□□□ -0.48
NUP54-201ENST00000264883 FGF16O43320 207 aa12.03□□□□□ -0.48
NUP54-201ENST00000264883 KLF4O43474 513 aa12.03□□□□□ -0.48
NUP54-201ENST00000264883 FARS2O95363 451 aaKnown RBP12.03□□□□□ -0.48
NUP54-201ENST00000264883 MUC1P15941 1255 aaPredicted RBP12.03□□□□□ -0.48
NUP54-201ENST00000264883 CDK2P24941 298 aa12.03□□□□□ -0.48
NUP54-201ENST00000264883 EIF2S3P41091 472 aaKnown RBP12.03□□□□□ -0.48
NUP54-201ENST00000264883 NCBP2P52298 156 aaKnown RBP eCLIP12.03□□□□□ -0.48
NUP54-201ENST00000264883 CLDN12P56749 244 aa12.03□□□□□ -0.48
NUP54-201ENST00000264883 CXADRP78310 365 aa12.03□□□□□ -0.48
NUP54-201ENST00000264883 DPTQ07507 201 aa12.03□□□□□ -0.48
NUP54-201ENST00000264883 PCGF3Q3KNV8 242 aa12.03□□□□□ -0.48
NUP54-201ENST00000264883 LY6G6FQ5SQ64 297 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms