RNA–Protein interactions for RNA: ENST00000264187.6

NID1-201, Transcript of nidogen 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NID1, Length 5,864 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NID1-201ENST00000264187 RAB40ALP0C0E4 278 aa14.03□□□□□ -0.16
NID1-201ENST00000264187 CPMP14384 443 aa14.03□□□□□ -0.16
NID1-201ENST00000264187 HBG1P69891 147 aa14.03□□□□□ -0.16
NID1-201ENST00000264187 HBG2P69892 147 aa14.03□□□□□ -0.16
NID1-201ENST00000264187 GPLD1P80108 840 aa14.03□□□□□ -0.16
NID1-201ENST00000264187 FRMD1Q8N878 549 aa14.03□□□□□ -0.16
NID1-201ENST00000264187 OR56B1Q8NGI3 324 aa14.03□□□□□ -0.16
NID1-201ENST00000264187 LILRB4Q8NHJ6 448 aa14.03□□□□□ -0.16
NID1-201ENST00000264187 HAVCR2Q8TDQ0 301 aa14.03□□□□□ -0.16
NID1-201ENST00000264187 RAB40AQ8WXH6 277 aa14.03□□□□□ -0.16
NID1-201ENST00000264187 PIGTQ969N2 578 aa14.03□□□□□ -0.16
NID1-201ENST00000264187 ULBP3Q9BZM4 244 aa14.03□□□□□ -0.16
NID1-201ENST00000264187 AMBRA1Q9C0C7 1298 aa14.03□□□□□ -0.16
NID1-201ENST00000264187 CHST11Q9NPF2 352 aa14.03□□□□□ -0.16
NID1-201ENST00000264187 UGDHO60701 494 aa14.03□□□□□ -0.16
NID1-201ENST00000264187 THBS1P07996 1170 aa14.03□□□□□ -0.16
NID1-201ENST00000264187 ZNF728P0DKX0 622 aa14.03□□□□□ -0.16
NID1-201ENST00000264187 CCR7P32248 378 aa14.03□□□□□ -0.16
NID1-201ENST00000264187 CCR6P51684 374 aa14.03□□□□□ -0.16
NID1-201ENST00000264187 FLI1Q01543 452 aaPredicted RBP14.03□□□□□ -0.16
NID1-201ENST00000264187 KIR2DS3Q14952 304 aa14.03□□□□□ -0.16
NID1-201ENST00000264187 SLC5A12Q1EHB4 618 aa14.03□□□□□ -0.16
NID1-201ENST00000264187 HACD4Q5VWC8 232 aa14.03□□□□□ -0.16
NID1-201ENST00000264187 AAED1Q7RTV5 226 aa14.03□□□□□ -0.16
NID1-201ENST00000264187 SMAP2Q8WU79 429 aaPredicted RBP14.03□□□□□ -0.16
NID1-201ENST00000264187 ZC3HAV1LQ96H79 300 aaKnown RBP14.03□□□□□ -0.16
NID1-201ENST00000264187 ZFAND5O76080 213 aa14.03□□□□□ -0.16
NID1-201ENST00000264187 NXPH2O95156 264 aa14.03□□□□□ -0.16
NID1-201ENST00000264187 SUOXP51687 545 aa14.03□□□□□ -0.16
NID1-201ENST00000264187 HBA1P69905 142 aa14.03□□□□□ -0.16
NID1-201ENST00000264187 ZNF252P-AS1Q0IIN9 211 aa14.03□□□□□ -0.16
NID1-201ENST00000264187 EMC10Q5UCC4 262 aa14.03□□□□□ -0.16
NID1-201ENST00000264187 BORCS6Q96GS4 357 aa14.03□□□□□ -0.16
NID1-201ENST00000264187 NT5DC2Q9H857 520 aa14.03□□□□□ -0.16
NID1-201ENST00000264187 KRBOX1C9JBD0 128 aa14.02□□□□□ -0.16
NID1-201ENST00000264187 CA3P07451 260 aa14.02□□□□□ -0.16
NID1-201ENST00000264187 CEBPBP17676 345 aa14.02□□□□□ -0.16
NID1-201ENST00000264187 HSD17B7P56937 341 aa14.02□□□□□ -0.16
NID1-201ENST00000264187 AVPI1Q5T686 147 aa14.02□□□□□ -0.16
NID1-201ENST00000264187 RPL22L1Q6P5R6 122 aaKnown RBP14.02□□□□□ -0.16
NID1-201ENST00000264187 Q6ZTK2 550 aa14.02□□□□□ -0.16
NID1-201ENST00000264187 TNFRSF13CQ96RJ3 184 aa14.02□□□□□ -0.16
NID1-201ENST00000264187 FAM103A1Q9BTL3 118 aaKnown RBP14.02□□□□□ -0.16
NID1-201ENST00000264187 NOSIPQ9Y314 301 aaKnown RBP14.02□□□□□ -0.16
NID1-201ENST00000264187 EMC9Q9Y3B6 208 aa14.02□□□□□ -0.16
NID1-201ENST00000264187 NPFFR2Q9Y5X5 522 aa14.02□□□□□ -0.16
NID1-201ENST00000264187 V9GYS6 101 aa14.02□□□□□ -0.16
NID1-201ENST00000264187 MICAL3Q7RTP6 2002 aa14.02□□□□□ -0.16
NID1-201ENST00000264187 HIST1H1TP22492 207 aaPredicted RBP14.02□□□□□ -0.16
NID1-201ENST00000264187 TMEM31Q5JXX7 168 aa14.02□□□□□ -0.16
NID1-201ENST00000264187 SSX9Q7RTT3 188 aa14.02□□□□□ -0.16
NID1-201ENST00000264187 SSX7Q7RTT5 188 aa14.02□□□□□ -0.16
NID1-201ENST00000264187 BCDIN3DQ7Z5W3 292 aaKnown RBP14.02□□□□□ -0.16
NID1-201ENST00000264187 ATOH1Q92858 354 aaPredicted RBP14.02□□□□□ -0.16
NID1-201ENST00000264187 VRTNQ9H8Y1 702 aa14.02□□□□□ -0.16
NID1-201ENST00000264187 DECR2Q9NUI1 292 aa14.02□□□□□ -0.16
NID1-201ENST00000264187 ITGAMP11215 1152 aa14.02□□□□□ -0.17
NID1-201ENST00000264187 CASP3P42574 277 aa14.02□□□□□ -0.17
NID1-201ENST00000264187 PARS2Q7L3T8 475 aaKnown RBP14.02□□□□□ -0.17
NID1-201ENST00000264187 BHLHE23Q8NDY6 225 aa14.02□□□□□ -0.17
NID1-201ENST00000264187 NXT1Q9UKK6 140 aaKnown RBP14.02□□□□□ -0.17
NID1-201ENST00000264187 PRSS38A1L453 326 aa14.02□□□□□ -0.17
NID1-201ENST00000264187 RAB19A4D1S5 217 aa14.02□□□□□ -0.17
NID1-201ENST00000264187 FGF4P08620 206 aa14.02□□□□□ -0.17
NID1-201ENST00000264187 SLC10A3P09131 477 aa14.02□□□□□ -0.17
NID1-201ENST00000264187 CNR1P21554 472 aa14.02□□□□□ -0.17
NID1-201ENST00000264187 BMPR1AP36894 532 aa14.02□□□□□ -0.17
NID1-201ENST00000264187 RAB11AP62491 216 aa14.02□□□□□ -0.17
NID1-201ENST00000264187 CTBSQ01459 385 aa14.02□□□□□ -0.17
NID1-201ENST00000264187 CPEB4Q17RY0 729 aaKnown RBP eCLIP14.02□□□□□ -0.17
NID1-201ENST00000264187 DDX51Q8N8A6 666 aaKnown RBP eCLIP14.02□□□□□ -0.17
NID1-201ENST00000264187 GHSRQ92847 366 aa14.02□□□□□ -0.17
NID1-201ENST00000264187 TMEM106AQ96A25 262 aa14.02□□□□□ -0.17
NID1-201ENST00000264187 DCLRE1CQ96SD1 692 aaKnown RBP14.02□□□□□ -0.17
NID1-201ENST00000264187 NMNAT3Q96T66 252 aa14.02□□□□□ -0.17
NID1-201ENST00000264187 C1orf198Q9H425 327 aa14.02□□□□□ -0.17
NID1-201ENST00000264187 ARNT2Q9HBZ2 717 aa14.02□□□□□ -0.17
NID1-201ENST00000264187 LRP5LA4QPB2 252 aa14.02□□□□□ -0.17
NID1-201ENST00000264187 CNIH1O95406 144 aa14.02□□□□□ -0.17
NID1-201ENST00000264187 AGFG1P52594 562 aaKnown RBP14.02□□□□□ -0.17
NID1-201ENST00000264187 LINC00696Q6ZRV3 163 aa14.02□□□□□ -0.17
NID1-201ENST00000264187 PPP1R3BQ86XI6 285 aa14.02□□□□□ -0.17
NID1-201ENST00000264187 TMEM40Q8WWA1 233 aa14.02□□□□□ -0.17
NID1-201ENST00000264187 ASB17Q8WXJ9 295 aa14.02□□□□□ -0.17
NID1-201ENST00000264187 TCTN2Q96GX1 697 aa14.02□□□□□ -0.17
NID1-201ENST00000264187 LURAP1Q96LR2 239 aa14.02□□□□□ -0.17
NID1-201ENST00000264187 NIPSNAP3BQ9BS92 247 aa14.02□□□□□ -0.17
NID1-201ENST00000264187 CNOT2Q9NZN8 540 aaKnown RBP14.02□□□□□ -0.17
NID1-201ENST00000264187 UGT2A1Q9Y4X1 527 aa14.02□□□□□ -0.17
NID1-201ENST00000264187 IGHV3-64DA0A0J9YX35 117 aa14.01□□□□□ -0.17
NID1-201ENST00000264187 ARHGAP33O14559 1287 aa14.01□□□□□ -0.17
NID1-201ENST00000264187 YIF1AO95070 293 aa14.01□□□□□ -0.17
NID1-201ENST00000264187 DDAH2O95865 285 aa14.01□□□□□ -0.17
NID1-201ENST00000264187 CTRB1P17538 263 aa14.01□□□□□ -0.17
NID1-201ENST00000264187 NPY4RP50391 375 aa14.01□□□□□ -0.17
NID1-201ENST00000264187 LGALS4P56470 323 aa14.01□□□□□ -0.17
NID1-201ENST00000264187 HTR4Q13639 388 aa14.01□□□□□ -0.17
NID1-201ENST00000264187 LYSMD4Q5XG99 296 aa14.01□□□□□ -0.17
NID1-201ENST00000264187 CTRB2Q6GPI1 263 aa14.01□□□□□ -0.17
NID1-201ENST00000264187 CYS1Q717R9 158 aa14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms