RNA–Protein interactions for RNA: ENST00000263741.11

SDF4-201, Transcript of stromal cell derived factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SDF4, Length 2,079 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-201ENST00000263741 HNRNPRO43390 633 aaKnown RBP16.34■□□□□ 0.21
SDF4-201ENST00000263741 TNFSF13O75888 250 aa16.34■□□□□ 0.21
SDF4-201ENST00000263741 RHCEP18577 417 aa16.34■□□□□ 0.21
SDF4-201ENST00000263741 GRPRP30550 384 aa16.34■□□□□ 0.21
SDF4-201ENST00000263741 ABLIM2Q6H8Q1 611 aa16.34■□□□□ 0.21
SDF4-201ENST00000263741 TBPL2Q6SJ96 375 aa16.34■□□□□ 0.21
SDF4-201ENST00000263741 ZBTB49Q6ZSB9 765 aa16.34■□□□□ 0.21
SDF4-201ENST00000263741 ZC3HAV1Q7Z2W4 902 aaKnown RBP16.34■□□□□ 0.21
SDF4-201ENST00000263741 KDM8Q8N371 416 aa16.34■□□□□ 0.21
SDF4-201ENST00000263741 LRRC17Q8N6Y2 441 aa16.34■□□□□ 0.21
SDF4-201ENST00000263741 MFSD8Q8NHS3 518 aa16.34■□□□□ 0.21
SDF4-201ENST00000263741 ZNF417Q8TAU3 575 aa16.34■□□□□ 0.21
SDF4-201ENST00000263741 ZNF587Q96SQ5 575 aaPredicted RBP16.34■□□□□ 0.21
SDF4-201ENST00000263741 PIP5K1AQ99755 562 aa16.34■□□□□ 0.21
SDF4-201ENST00000263741 ALPK2Q86TB3 2170 aa16.34■□□□□ 0.21
SDF4-201ENST00000263741 TRBV4-1A0A0J9YWV2 114 aa16.33■□□□□ 0.21
SDF4-201ENST00000263741 WIPF3A6NGB9 483 aa16.33■□□□□ 0.21
SDF4-201ENST00000263741 HSPB2A8KAH6 182 aa16.33■□□□□ 0.21
SDF4-201ENST00000263741 PDLIM1O00151 329 aa16.33■□□□□ 0.21
SDF4-201ENST00000263741 CYTIPO60759 359 aa16.33■□□□□ 0.21
SDF4-201ENST00000263741 CH25HO95992 272 aa16.33■□□□□ 0.21
SDF4-201ENST00000263741 BGLAPP02818 100 aa16.33■□□□□ 0.21
SDF4-201ENST00000263741 H1F0P07305 194 aaKnown RBP16.33■□□□□ 0.21
SDF4-201ENST00000263741 THRBP10828 461 aa16.33■□□□□ 0.21
SDF4-201ENST00000263741 FCGR1AP12314 374 aa16.33■□□□□ 0.21
SDF4-201ENST00000263741 FUT1P19526 365 aa16.33■□□□□ 0.21
SDF4-201ENST00000263741 GTF2E2P29084 291 aaKnown RBP16.33■□□□□ 0.21
SDF4-201ENST00000263741 CHRNB4P30926 498 aa16.33■□□□□ 0.21
SDF4-201ENST00000263741 H3F3AP84243 136 aa16.33■□□□□ 0.21
SDF4-201ENST00000263741 RASGEF1BQ0VAM2 473 aa16.33■□□□□ 0.21
SDF4-201ENST00000263741 TRAM2Q15035 370 aa16.33■□□□□ 0.21
SDF4-201ENST00000263741 HSPB2Q16082 182 aa16.33■□□□□ 0.21
SDF4-201ENST00000263741 PAQR6Q6TCH4 344 aa16.33■□□□□ 0.21
SDF4-201ENST00000263741 MCEMP1Q8IX19 187 aa16.33■□□□□ 0.21
SDF4-201ENST00000263741 TUSC5Q8IXB3 177 aa16.33■□□□□ 0.21
SDF4-201ENST00000263741 PIK3C3Q8NEB9 887 aa16.33■□□□□ 0.21
SDF4-201ENST00000263741 SLCO4A1Q96BD0 722 aa16.33■□□□□ 0.21
SDF4-201ENST00000263741 EPYCQ99645 322 aa16.33■□□□□ 0.21
SDF4-201ENST00000263741 PSD2Q9BQI7 771 aa16.33■□□□□ 0.21
SDF4-201ENST00000263741 RBM38Q9H0Z9 239 aaKnown RBP16.33■□□□□ 0.21
SDF4-201ENST00000263741 ZNF23P17027 643 aa16.33■□□□□ 0.2
SDF4-201ENST00000263741 CTSSP25774 331 aa16.33■□□□□ 0.2
SDF4-201ENST00000263741 AGTR1P30556 359 aa16.33■□□□□ 0.2
SDF4-201ENST00000263741 RRM2P31350 389 aa16.33■□□□□ 0.2
SDF4-201ENST00000263741 IFNA8P32881 189 aa16.33■□□□□ 0.2
SDF4-201ENST00000263741 KIR2DL2P43627 348 aaPredicted RBP16.33■□□□□ 0.2
SDF4-201ENST00000263741 CHRNB3Q05901 458 aa16.33■□□□□ 0.2
SDF4-201ENST00000263741 PPP1R8Q12972 351 aaKnown RBP16.33■□□□□ 0.2
SDF4-201ENST00000263741 GK3PQ14409 553 aa16.33■□□□□ 0.2
SDF4-201ENST00000263741 GUSBP1Q15486 140 aa16.33■□□□□ 0.2
SDF4-201ENST00000263741 FAM98BQ52LJ0 330 aaKnown RBP16.33■□□□□ 0.2
SDF4-201ENST00000263741 OR2A2Q6IF42 318 aa16.33■□□□□ 0.2
SDF4-201ENST00000263741 GPAT4Q86UL3 456 aa16.33■□□□□ 0.2
SDF4-201ENST00000263741 NRMQ8IXM6 262 aa16.33■□□□□ 0.2
SDF4-201ENST00000263741 ZNF808Q8N4W9 903 aaPredicted RBP16.33■□□□□ 0.2
SDF4-201ENST00000263741 SLC7A13Q8TCU3 470 aa16.33■□□□□ 0.2
SDF4-201ENST00000263741 CA5BP1Q8WTZ4 195 aa16.33■□□□□ 0.2
SDF4-201ENST00000263741 ANKRD60Q9BZ19 345 aa16.33■□□□□ 0.2
SDF4-201ENST00000263741 C12orf49Q9H741 205 aa16.33■□□□□ 0.2
SDF4-201ENST00000263741 ZNF716A6NP11 495 aa16.32■□□□□ 0.2
SDF4-201ENST00000263741 EEF1E1-BLOC1S5C9J1V9 151 aa16.32■□□□□ 0.2
SDF4-201ENST00000263741 EEF1E1O43324 174 aaKnown RBP16.32■□□□□ 0.2
SDF4-201ENST00000263741 ITGA2P17301 1181 aa16.32■□□□□ 0.2
SDF4-201ENST00000263741 MAGEA2P43356 314 aa16.32■□□□□ 0.2
SDF4-201ENST00000263741 P2RY4P51582 365 aa16.32■□□□□ 0.2
SDF4-201ENST00000263741 TUBA4AP68366 448 aa16.32■□□□□ 0.2
SDF4-201ENST00000263741 SEC23BQ15437 767 aa16.32■□□□□ 0.2
SDF4-201ENST00000263741 ZNF74Q16587 644 aa16.32■□□□□ 0.2
SDF4-201ENST00000263741 C5orf46Q6UWT4 87 aa16.32■□□□□ 0.2
SDF4-201ENST00000263741 AMIGO2Q86SJ2 522 aa16.32■□□□□ 0.2
SDF4-201ENST00000263741 CIB1Q99828 191 aa16.32■□□□□ 0.2
SDF4-201ENST00000263741 MAGIXQ9H6Y5 334 aa16.32■□□□□ 0.2
SDF4-201ENST00000263741 CCM2LQ9NUG4 571 aaPredicted RBP16.32■□□□□ 0.2
SDF4-201ENST00000263741 VNN3Q9NY84 501 aa16.32■□□□□ 0.2
SDF4-201ENST00000263741 MED31Q9Y3C7 131 aa16.32■□□□□ 0.2
SDF4-201ENST00000263741 A0A087WUU8 490 aa16.31■□□□□ 0.2
SDF4-201ENST00000263741 AQP7P3A6NL99 342 aa16.31■□□□□ 0.2
SDF4-201ENST00000263741 DNPH1O43598 174 aa16.31■□□□□ 0.2
SDF4-201ENST00000263741 SS18L1O75177 396 aaPredicted RBP16.31■□□□□ 0.2
SDF4-201ENST00000263741 EDNRAP25101 427 aa16.31■□□□□ 0.2
SDF4-201ENST00000263741 RBM34P42696 430 aaKnown RBP16.31■□□□□ 0.2
SDF4-201ENST00000263741 CTBP2P56545 445 aa16.31■□□□□ 0.2
SDF4-201ENST00000263741 PODNL1Q6PEZ8 512 aa16.31■□□□□ 0.2
SDF4-201ENST00000263741 ZNF730Q6ZMV8 503 aa16.31■□□□□ 0.2
SDF4-201ENST00000263741 SLC46A3Q7Z3Q1 461 aa16.31■□□□□ 0.2
SDF4-201ENST00000263741 BTLAQ7Z6A9 289 aa16.31■□□□□ 0.2
SDF4-201ENST00000263741 LUZP2Q86TE4 346 aa16.31■□□□□ 0.2
SDF4-201ENST00000263741 GMPPAQ96IJ6 420 aaPredicted RBP16.31■□□□□ 0.2
SDF4-201ENST00000263741 ZFP3Q96NJ6 502 aa16.31■□□□□ 0.2
SDF4-201ENST00000263741 KLHL9Q9P2J3 617 aa16.31■□□□□ 0.2
SDF4-201ENST00000263741 PCDHGB5Q9Y5G0 923 aa16.31■□□□□ 0.2
SDF4-201ENST00000263741 OR2T1O43869 369 aa16.31■□□□□ 0.2
SDF4-201ENST00000263741 EIF1BO60739 113 aaKnown RBP16.31■□□□□ 0.2
SDF4-201ENST00000263741 TIPRLO75663 272 aa16.31■□□□□ 0.2
SDF4-201ENST00000263741 RAP2AP10114 183 aa16.31■□□□□ 0.2
SDF4-201ENST00000263741 UMPSP11172 480 aa16.31■□□□□ 0.2
SDF4-201ENST00000263741 IFI30P13284 250 aa16.31■□□□□ 0.2
SDF4-201ENST00000263741 RNPS1Q15287 305 aaKnown RBP16.31■□□□□ 0.2
SDF4-201ENST00000263741 NUFIP2Q7Z417 695 aaKnown RBP16.31■□□□□ 0.2
SDF4-201ENST00000263741 PIGXQ8TBF5 258 aa16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms