RNA–Protein interactions for RNA: ENST00000263073.10

SMG6-201, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMG6, Length 5,960 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-201ENST00000263073 BADQ92934 168 aa11.19□□□□□ -0.62
SMG6-201ENST00000263073 MRI1Q9BV20 369 aa11.19□□□□□ -0.62
SMG6-201ENST00000263073 KLF16Q9BXK1 252 aaPredicted RBP11.19□□□□□ -0.62
SMG6-201ENST00000263073 TINAGL1Q9GZM7 467 aaPredicted RBP11.19□□□□□ -0.62
SMG6-201ENST00000263073 OR10A5Q9H207 317 aa11.19□□□□□ -0.62
SMG6-201ENST00000263073 OR10A2Q9H208 303 aa11.19□□□□□ -0.62
SMG6-201ENST00000263073 LHX3Q9UBR4 397 aa11.19□□□□□ -0.62
SMG6-201ENST00000263073 RARRES3Q9UL19 164 aa11.19□□□□□ -0.62
SMG6-201ENST00000263073 SLC6A14Q9UN76 642 aa11.19□□□□□ -0.62
SMG6-201ENST00000263073 SETD1AO15047 1707 aaKnown RBP11.19□□□□□ -0.62
SMG6-201ENST00000263073 G3V3Y1 287 aa11.19□□□□□ -0.62
SMG6-201ENST00000263073 RAB40ALP0C0E4 278 aa11.19□□□□□ -0.62
SMG6-201ENST00000263073 CSNK1DP48730 415 aa11.19□□□□□ -0.62
SMG6-201ENST00000263073 DUSP6Q16828 381 aa11.19□□□□□ -0.62
SMG6-201ENST00000263073 KCTD11Q693B1 232 aa11.19□□□□□ -0.62
SMG6-201ENST00000263073 PAQR9Q6ZVX9 377 aa11.19□□□□□ -0.62
SMG6-201ENST00000263073 FAM160A2Q8N612 972 aaPredicted RBP11.19□□□□□ -0.62
SMG6-201ENST00000263073 OR6T1Q8NGN1 323 aa11.19□□□□□ -0.62
SMG6-201ENST00000263073 OR13C5Q8NGS8 318 aa11.19□□□□□ -0.62
SMG6-201ENST00000263073 RAB40AQ8WXH6 277 aa11.19□□□□□ -0.62
SMG6-201ENST00000263073 CPNE4Q96A23 557 aaPredicted RBP11.19□□□□□ -0.62
SMG6-201ENST00000263073 BORCS7Q96B45 105 aa11.19□□□□□ -0.62
SMG6-201ENST00000263073 CDH20Q9HBT6 801 aa11.19□□□□□ -0.62
SMG6-201ENST00000263073 PLEKHM1Q9Y4G2 1056 aa11.19□□□□□ -0.62
SMG6-201ENST00000263073 ZFP92A6NM28 416 aa11.19□□□□□ -0.62
SMG6-201ENST00000263073 P2RX6O15547 441 aa11.19□□□□□ -0.62
SMG6-201ENST00000263073 ZNF623O75123 536 aa11.19□□□□□ -0.62
SMG6-201ENST00000263073 F10P00742 488 aa11.19□□□□□ -0.62
SMG6-201ENST00000263073 HNF1AP20823 631 aa11.19□□□□□ -0.62
SMG6-201ENST00000263073 NTSR1P30989 418 aa11.19□□□□□ -0.62
SMG6-201ENST00000263073 STEAP1BQ6NZ63 245 aa11.19□□□□□ -0.62
SMG6-201ENST00000263073 NECAP1Q8NC96 275 aa11.19□□□□□ -0.62
SMG6-201ENST00000263073 DTD2Q96FN9 168 aa11.19□□□□□ -0.62
SMG6-201ENST00000263073 DCLRE1CQ96SD1 692 aaKnown RBP11.19□□□□□ -0.62
SMG6-201ENST00000263073 LPAR4Q99677 370 aa11.19□□□□□ -0.62
SMG6-201ENST00000263073 MCOLN1Q9GZU1 580 aa11.19□□□□□ -0.62
SMG6-201ENST00000263073 B4GALT7Q9UBV7 327 aa11.19□□□□□ -0.62
SMG6-201ENST00000263073 SLC23A2Q9UGH3 650 aa11.19□□□□□ -0.62
SMG6-201ENST00000263073 SLC45A1Q9Y2W3 748 aa11.19□□□□□ -0.62
SMG6-201ENST00000263073 OR5K4A6NMS3 321 aa11.19□□□□□ -0.62
SMG6-201ENST00000263073 B4DXG7 233 aa11.19□□□□□ -0.62
SMG6-201ENST00000263073 AIPO00170 330 aa11.19□□□□□ -0.62
SMG6-201ENST00000263073 HSD17B6O14756 317 aa11.19□□□□□ -0.62
SMG6-201ENST00000263073 MSTNO14793 375 aa11.19□□□□□ -0.62
SMG6-201ENST00000263073 CNMDO75829 334 aa11.19□□□□□ -0.62
SMG6-201ENST00000263073 OR7C1O76099 320 aaPredicted RBP11.19□□□□□ -0.62
SMG6-201ENST00000263073 APLNRP35414 380 aa11.19□□□□□ -0.62
SMG6-201ENST00000263073 DDOSTP39656 456 aa11.19□□□□□ -0.62
SMG6-201ENST00000263073 EFNA3P52797 238 aa11.19□□□□□ -0.62
SMG6-201ENST00000263073 FOXK2Q01167 660 aa11.19□□□□□ -0.62
SMG6-201ENST00000263073 ARHGAP19Q14CB8 494 aa11.19□□□□□ -0.62
SMG6-201ENST00000263073 TMEM200AQ86VY9 491 aa11.19□□□□□ -0.62
SMG6-201ENST00000263073 RNF128Q8TEB7 428 aa11.19□□□□□ -0.62
SMG6-201ENST00000263073 SLC7A6Q92536 515 aa11.19□□□□□ -0.62
SMG6-201ENST00000263073 RAB3CQ96E17 227 aa11.19□□□□□ -0.62
SMG6-201ENST00000263073 BMFQ96LC9 184 aa11.19□□□□□ -0.62
SMG6-201ENST00000263073 INSM2Q96T92 566 aaPredicted RBP11.19□□□□□ -0.62
SMG6-201ENST00000263073 CHRDQ9H2X0 955 aa11.19□□□□□ -0.62
SMG6-201ENST00000263073 GAB2Q9UQC2 676 aa11.19□□□□□ -0.62
SMG6-201ENST00000263073 FTCDNL1E5RQL4 147 aa11.18□□□□□ -0.62
SMG6-201ENST00000263073 NME2P1O60361 137 aa11.18□□□□□ -0.62
SMG6-201ENST00000263073 IMPA1P29218 277 aa11.18□□□□□ -0.62
SMG6-201ENST00000263073 C3orf38Q5JPI3 329 aa11.18□□□□□ -0.62
SMG6-201ENST00000263073 AADACL3Q5VUY0 350 aa11.18□□□□□ -0.62
SMG6-201ENST00000263073 SLC6A19Q695T7 634 aa11.18□□□□□ -0.62
SMG6-201ENST00000263073 OR6V1Q8N148 313 aa11.18□□□□□ -0.62
SMG6-201ENST00000263073 BSCL2Q96G97 398 aaPredicted RBP11.18□□□□□ -0.62
SMG6-201ENST00000263073 MED30Q96HR3 178 aa11.18□□□□□ -0.62
SMG6-201ENST00000263073 SFXN2Q96NB2 322 aa11.18□□□□□ -0.62
SMG6-201ENST00000263073 CPEB1Q9BZB8 566 aaKnown RBP11.18□□□□□ -0.62
SMG6-201ENST00000263073 NKX6-2Q9C056 277 aaPredicted RBP11.18□□□□□ -0.62
SMG6-201ENST00000263073 TM7SF3Q9NS93 570 aa11.18□□□□□ -0.62
SMG6-201ENST00000263073 KLK4Q9Y5K2 254 aa11.18□□□□□ -0.62
SMG6-201ENST00000263073 TRBV11-1A0A0K0K1C0 115 aa11.18□□□□□ -0.62
SMG6-201ENST00000263073 A6NIZ1 184 aa11.18□□□□□ -0.62
SMG6-201ENST00000263073 FOLR1P15328 257 aa11.18□□□□□ -0.62
SMG6-201ENST00000263073 RAP1BP61224 184 aa11.18□□□□□ -0.62
SMG6-201ENST00000263073 RAP1AP62834 184 aa11.18□□□□□ -0.62
SMG6-201ENST00000263073 SYT6Q5T7P8 510 aaPredicted RBP11.18□□□□□ -0.62
SMG6-201ENST00000263073 SLC25A31Q9H0C2 315 aa11.18□□□□□ -0.62
SMG6-201ENST00000263073 OSGIN2Q9Y236 505 aa11.18□□□□□ -0.62
SMG6-201ENST00000263073 ZNF816-ZNF321PA0A0X1KG74 233 aa11.18□□□□□ -0.62
SMG6-201ENST00000263073 FITM1A5D6W6 292 aa11.18□□□□□ -0.62
SMG6-201ENST00000263073 DNAJB6O75190 326 aa11.18□□□□□ -0.62
SMG6-201ENST00000263073 APBB3O95704 486 aa11.18□□□□□ -0.62
SMG6-201ENST00000263073 FURINP09958 794 aa11.18□□□□□ -0.62
SMG6-201ENST00000263073 OR10A3P58181 314 aa11.18□□□□□ -0.62
SMG6-201ENST00000263073 FOXK1P85037 733 aa11.18□□□□□ -0.62
SMG6-201ENST00000263073 DGCR2P98153 550 aa11.18□□□□□ -0.62
SMG6-201ENST00000263073 TLE1Q04724 770 aa11.18□□□□□ -0.62
SMG6-201ENST00000263073 BAXQ07812 192 aa11.18□□□□□ -0.62
SMG6-201ENST00000263073 ADIRFQ15847 76 aa11.18□□□□□ -0.62
SMG6-201ENST00000263073 C2orf76Q3KRA6 126 aa11.18□□□□□ -0.62
SMG6-201ENST00000263073 TMEM88Q6PEY1 159 aa11.18□□□□□ -0.62
SMG6-201ENST00000263073 DPPA4Q7L190 304 aa11.18□□□□□ -0.62
SMG6-201ENST00000263073 SSX9Q7RTT3 188 aa11.18□□□□□ -0.62
SMG6-201ENST00000263073 CBARPQ8N350 705 aaPredicted RBP11.18□□□□□ -0.62
SMG6-201ENST00000263073 ZNF321PQ8N8H1 164 aa11.18□□□□□ -0.62
SMG6-201ENST00000263073 TAAR8Q969N4 342 aa11.18□□□□□ -0.62
SMG6-201ENST00000263073 VN1R3Q9BXE9 311 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms