RNA–Protein interactions for RNA: ENST00000262291.8

VMP1-201, Transcript of vacuole membrane protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VMP1, Length 2,712 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-201ENST00000262291 FAPQ12884 760 aa12.37□□□□□ -0.43
VMP1-201ENST00000262291 BICRALQ6AI39 1079 aa12.37□□□□□ -0.43
VMP1-201ENST00000262291 CMIPQ8IY22 773 aa12.37□□□□□ -0.43
VMP1-201ENST00000262291 CARFQ8N187 725 aa12.37□□□□□ -0.43
VMP1-201ENST00000262291 YIPF7Q8N8F6 280 aa12.37□□□□□ -0.43
VMP1-201ENST00000262291 ZNF485Q8NCK3 441 aa12.37□□□□□ -0.43
VMP1-201ENST00000262291 DNAJA4Q8WW22 397 aaPredicted RBP12.37□□□□□ -0.43
VMP1-201ENST00000262291 KATNB1Q9BVA0 655 aa12.37□□□□□ -0.43
VMP1-201ENST00000262291 SUSD2Q9UGT4 822 aa12.37□□□□□ -0.43
VMP1-201ENST00000262291 HSPB11Q9Y547 144 aa12.37□□□□□ -0.43
VMP1-201ENST00000262291 NDUFB2O95178 105 aa12.37□□□□□ -0.43
VMP1-201ENST00000262291 PEPDP12955 493 aa12.37□□□□□ -0.43
VMP1-201ENST00000262291 ZNF250P15622 560 aa12.37□□□□□ -0.43
VMP1-201ENST00000262291 FBXW4P57775 412 aa12.37□□□□□ -0.43
VMP1-201ENST00000262291 TAGLNQ01995 201 aaKnown RBP12.37□□□□□ -0.43
VMP1-201ENST00000262291 EGR4Q05215 589 aa12.37□□□□□ -0.43
VMP1-201ENST00000262291 WBP2NLQ6ICG8 309 aa12.37□□□□□ -0.43
VMP1-201ENST00000262291 ZNF322Q6U7Q0 402 aaPredicted RBP12.37□□□□□ -0.43
VMP1-201ENST00000262291 ANKRD37Q7Z713 158 aa12.37□□□□□ -0.43
VMP1-201ENST00000262291 ATG4DQ86TL0 474 aaPredicted RBP12.37□□□□□ -0.43
VMP1-201ENST00000262291 GID4Q8IVV7 300 aa12.37□□□□□ -0.43
VMP1-201ENST00000262291 OR4M2Q8NGB6 313 aa12.37□□□□□ -0.43
VMP1-201ENST00000262291 TSSK2Q96PF2 358 aa12.37□□□□□ -0.43
VMP1-201ENST00000262291 TIMP4Q99727 224 aa12.37□□□□□ -0.43
VMP1-201ENST00000262291 NPAS1Q99742 590 aa12.37□□□□□ -0.43
VMP1-201ENST00000262291 SLC30A2Q9BRI3 323 aa12.37□□□□□ -0.43
VMP1-201ENST00000262291 GON7Q9BXV9 100 aa12.37□□□□□ -0.43
VMP1-201ENST00000262291 SF3B6Q9Y3B4 125 aaKnown RBP12.37□□□□□ -0.43
VMP1-201ENST00000262291 GRIP1Q9Y3R0 1128 aa12.37□□□□□ -0.43
VMP1-201ENST00000262291 PEX16Q9Y5Y5 336 aa12.37□□□□□ -0.43
VMP1-201ENST00000262291 MED12Q93074 2177 aa12.36□□□□□ -0.43
VMP1-201ENST00000262291 CIB4A0PJX0 185 aa12.36□□□□□ -0.43
VMP1-201ENST00000262291 J3QLW9 94 aa12.36□□□□□ -0.43
VMP1-201ENST00000262291 PSMD9O00233 223 aa12.36□□□□□ -0.43
VMP1-201ENST00000262291 SHOXO15266 292 aa12.36□□□□□ -0.43
VMP1-201ENST00000262291 ZNF19P17023 458 aa12.36□□□□□ -0.43
VMP1-201ENST00000262291 ZNF28P17035 718 aa12.36□□□□□ -0.43
VMP1-201ENST00000262291 SOX6P35712 828 aa12.36□□□□□ -0.43
VMP1-201ENST00000262291 AP2S1P53680 142 aaPredicted RBP12.36□□□□□ -0.43
VMP1-201ENST00000262291 ACY1Q03154 408 aa12.36□□□□□ -0.43
VMP1-201ENST00000262291 KHDRBS1Q07666 443 aaKnown RBP eCLIP12.36□□□□□ -0.43
VMP1-201ENST00000262291 HNRNPA0Q13151 305 aaKnown RBP12.36□□□□□ -0.43
VMP1-201ENST00000262291 RNLSQ5VYX0 342 aa12.36□□□□□ -0.43
VMP1-201ENST00000262291 ACBD7Q8N6N7 88 aa12.36□□□□□ -0.43
VMP1-201ENST00000262291 TMEM105Q8N8V8 129 aa12.36□□□□□ -0.43
VMP1-201ENST00000262291 FAM71CQ8NEG0 241 aa12.36□□□□□ -0.43
VMP1-201ENST00000262291 ATP6V1C2Q8NEY4 427 aa12.36□□□□□ -0.43
VMP1-201ENST00000262291 OR4D9Q8NGE8 314 aa12.36□□□□□ -0.43
VMP1-201ENST00000262291 Q96M85 177 aa12.36□□□□□ -0.43
VMP1-201ENST00000262291 CCDC59Q9P031 241 aaKnown RBP12.36□□□□□ -0.43
VMP1-201ENST00000262291 CHRNA9Q9UGM1 479 aa12.36□□□□□ -0.43
VMP1-201ENST00000262291 TEX13CA0A0J9YWL9 993 aa12.36□□□□□ -0.43
VMP1-201ENST00000262291 A0A1W2PQ09 198 aa12.36□□□□□ -0.43
VMP1-201ENST00000262291 ZNF670-ZNF695F2Z2N8 137 aa12.36□□□□□ -0.43
VMP1-201ENST00000262291 TSPAN2O60636 221 aa12.36□□□□□ -0.43
VMP1-201ENST00000262291 IGHA1P01876 353 aa12.36□□□□□ -0.43
VMP1-201ENST00000262291 CCL4P13236 92 aa12.36□□□□□ -0.43
VMP1-201ENST00000262291 TNFSF8P32971 234 aa12.36□□□□□ -0.43
VMP1-201ENST00000262291 KCTD20Q7Z5Y7 419 aa12.36□□□□□ -0.43
VMP1-201ENST00000262291 CCDC190Q86UF4 302 aa12.36□□□□□ -0.43
VMP1-201ENST00000262291 GLCCI1Q86VQ1 547 aa12.36□□□□□ -0.43
VMP1-201ENST00000262291 OR6K6Q8NGW6 343 aa12.36□□□□□ -0.43
VMP1-201ENST00000262291 DUSP19Q8WTR2 217 aa12.36□□□□□ -0.43
VMP1-201ENST00000262291 SMPDL3BQ92485 455 aa12.36□□□□□ -0.43
VMP1-201ENST00000262291 AIFM2Q9BRQ8 373 aa12.36□□□□□ -0.43
VMP1-201ENST00000262291 ADGRL4Q9HBW9 690 aa12.36□□□□□ -0.43
VMP1-201ENST00000262291 GALNT9Q9HCQ5 603 aa12.36□□□□□ -0.43
VMP1-201ENST00000262291 ASB6Q9NWX5 421 aa12.36□□□□□ -0.43
VMP1-201ENST00000262291 SRPK3Q9UPE1 567 aa12.36□□□□□ -0.43
VMP1-201ENST00000262291 CFL2Q9Y281 166 aa12.36□□□□□ -0.43
VMP1-201ENST00000262291 NUP210LQ5VU65 1888 aa12.35□□□□□ -0.43
VMP1-201ENST00000262291 TNRC6BQ9UPQ9 1833 aaKnown RBP12.35□□□□□ -0.43
VMP1-201ENST00000262291 CCDC163A0A0D9SF12 145 aa12.35□□□□□ -0.43
VMP1-201ENST00000262291 IRGMA1A4Y4 181 aa12.35□□□□□ -0.43
VMP1-201ENST00000262291 I3L521 148 aa12.35□□□□□ -0.43
VMP1-201ENST00000262291 MSL3P1P0C860 447 aa12.35□□□□□ -0.43
VMP1-201ENST00000262291 PYCR1P32322 319 aa12.35□□□□□ -0.43
VMP1-201ENST00000262291 CLDN6P56747 220 aa12.35□□□□□ -0.43
VMP1-201ENST00000262291 OR12D2P58182 307 aa12.35□□□□□ -0.43
VMP1-201ENST00000262291 RNF4P78317 190 aa12.35□□□□□ -0.43
VMP1-201ENST00000262291 SIGLEC14Q08ET2 396 aa12.35□□□□□ -0.43
VMP1-201ENST00000262291 VASNQ6EMK4 673 aa12.35□□□□□ -0.43
VMP1-201ENST00000262291 RPL13AP3Q6NVV1 102 aa12.35□□□□□ -0.43
VMP1-201ENST00000262291 ZFAND1Q8TCF1 268 aa12.35□□□□□ -0.43
VMP1-201ENST00000262291 TTC9Q92623 222 aa12.35□□□□□ -0.43
VMP1-201ENST00000262291 SLC25A36Q96CQ1 311 aa12.35□□□□□ -0.43
VMP1-201ENST00000262291 NANSQ9NR45 359 aa12.35□□□□□ -0.43
VMP1-201ENST00000262291 SLC23A1Q9UHI7 598 aa12.35□□□□□ -0.43
VMP1-201ENST00000262291 ICAM5Q9UMF0 924 aa12.35□□□□□ -0.43
VMP1-201ENST00000262291 TRBV11-1A0A0K0K1C0 115 aa12.35□□□□□ -0.43
VMP1-201ENST00000262291 A0A1W2PQL4 384 aaPredicted RBP12.35□□□□□ -0.43
VMP1-201ENST00000262291 SHISA3A0PJX4 238 aa12.35□□□□□ -0.43
VMP1-201ENST00000262291 OR6C68A6NDL8 312 aa12.35□□□□□ -0.43
VMP1-201ENST00000262291 C11orf98E9PRG8 122 aa12.35□□□□□ -0.43
VMP1-201ENST00000262291 J3QRE1 110 aa12.35□□□□□ -0.43
VMP1-201ENST00000262291 MASP2O00187 686 aa12.35□□□□□ -0.43
VMP1-201ENST00000262291 SLC30A4O14863 429 aa12.35□□□□□ -0.43
VMP1-201ENST00000262291 ARHGEF9O43307 516 aa12.35□□□□□ -0.43
VMP1-201ENST00000262291 GUSBP08236 651 aa12.35□□□□□ -0.43
VMP1-201ENST00000262291 HOXA6P31267 233 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms