RNA–Protein interactions for RNA: ENST00000262018.7

SGCA-201, Transcript of sarcoglycan alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SGCA, Length 1,432 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCA-201ENST00000262018 A0A0B4J2E0 115 aa11.94□□□□□ -0.5
SGCA-201ENST00000262018 A0A1B0GX12 115 aa11.94□□□□□ -0.5
SGCA-201ENST00000262018 MBD3L4A6NDZ8 208 aaPredicted RBP11.94□□□□□ -0.5
SGCA-201ENST00000262018 MBD3L5A6NJ08 208 aaPredicted RBP11.94□□□□□ -0.5
SGCA-201ENST00000262018 SLC1A7O00341 560 aa11.94□□□□□ -0.5
SGCA-201ENST00000262018 ABCB7O75027 752 aa11.94□□□□□ -0.5
SGCA-201ENST00000262018 GLSO94925 669 aaPredicted RBP11.94□□□□□ -0.5
SGCA-201ENST00000262018 UTS2O95399 124 aa11.94□□□□□ -0.5
SGCA-201ENST00000262018 ANGPTL1O95841 491 aa11.94□□□□□ -0.5
SGCA-201ENST00000262018 CSTAP01040 98 aa11.94□□□□□ -0.5
SGCA-201ENST00000262018 NGFRP08138 427 aa11.94□□□□□ -0.5
SGCA-201ENST00000262018 CELA3AP09093 270 aa11.94□□□□□ -0.5
SGCA-201ENST00000262018 OMPP47874 163 aa11.94□□□□□ -0.5
SGCA-201ENST00000262018 PNLIPRP2P54317 469 aa11.94□□□□□ -0.5
SGCA-201ENST00000262018 LSM11P83369 360 aaKnown RBP eCLIP11.94□□□□□ -0.5
SGCA-201ENST00000262018 TSPAN31Q12999 210 aa11.94□□□□□ -0.5
SGCA-201ENST00000262018 OPN5Q6U736 354 aa11.94□□□□□ -0.5
SGCA-201ENST00000262018 RRM2BQ7LG56 351 aa11.94□□□□□ -0.5
SGCA-201ENST00000262018 GPALPP1Q8IXQ4 340 aa11.94□□□□□ -0.5
SGCA-201ENST00000262018 RNF113BQ8IZP6 322 aaKnown RBP11.94□□□□□ -0.5
SGCA-201ENST00000262018 RHOXF1Q8NHV9 184 aa11.94□□□□□ -0.5
SGCA-201ENST00000262018 CNIH3Q8TBE1 160 aa11.94□□□□□ -0.5
SGCA-201ENST00000262018 TMEM255BQ8WV15 326 aa11.94□□□□□ -0.5
SGCA-201ENST00000262018 RASL10BQ96S79 203 aa11.94□□□□□ -0.5
SGCA-201ENST00000262018 GPA33Q99795 319 aa11.94□□□□□ -0.5
SGCA-201ENST00000262018 LIN28AQ9H9Z2 209 aaKnown RBP11.94□□□□□ -0.5
SGCA-201ENST00000262018 FLRT3Q9NZU0 649 aa11.94□□□□□ -0.5
SGCA-201ENST00000262018 ANK3Q12955 4377 aaKnown RBP11.94□□□□□ -0.5
SGCA-201ENST00000262018 A0A1W2PQD3 144 aa11.94□□□□□ -0.5
SGCA-201ENST00000262018 SCDO00767 359 aa11.94□□□□□ -0.5
SGCA-201ENST00000262018 PHF1O43189 567 aaPredicted RBP11.94□□□□□ -0.5
SGCA-201ENST00000262018 KLF4O43474 513 aa11.94□□□□□ -0.5
SGCA-201ENST00000262018 SUSD5O60279 629 aa11.94□□□□□ -0.5
SGCA-201ENST00000262018 ADAM11O75078 769 aa11.94□□□□□ -0.5
SGCA-201ENST00000262018 WBP4O75554 376 aaKnown RBP11.94□□□□□ -0.5
SGCA-201ENST00000262018 REM1O75628 298 aa11.94□□□□□ -0.5
SGCA-201ENST00000262018 NTN1O95631 604 aa11.94□□□□□ -0.5
SGCA-201ENST00000262018 JUNBP17275 347 aaPredicted RBP11.94□□□□□ -0.5
SGCA-201ENST00000262018 GABRB1P18505 474 aa11.94□□□□□ -0.5
SGCA-201ENST00000262018 FPR3P25089 353 aa11.94□□□□□ -0.5
SGCA-201ENST00000262018 IL12BP29460 328 aa11.94□□□□□ -0.5
SGCA-201ENST00000262018 NRG3P56975 720 aa11.94□□□□□ -0.5
SGCA-201ENST00000262018 KRTAP1-1Q07627 177 aa11.94□□□□□ -0.5
SGCA-201ENST00000262018 PLCXD2Q0VAA5 305 aa11.94□□□□□ -0.5
SGCA-201ENST00000262018 CNPY1Q3B7I2 92 aa11.94□□□□□ -0.5
SGCA-201ENST00000262018 ZBED5Q49AG3 693 aa11.94□□□□□ -0.5
SGCA-201ENST00000262018 SLX4IPQ5VYV7 408 aa11.94□□□□□ -0.5
SGCA-201ENST00000262018 ZNF773Q6PK81 442 aa11.94□□□□□ -0.5
SGCA-201ENST00000262018 RASSF6Q6ZTQ3 369 aa11.94□□□□□ -0.5
SGCA-201ENST00000262018 GPR141Q7Z602 305 aa11.94□□□□□ -0.5
SGCA-201ENST00000262018 DND1Q8IYX4 353 aaKnown RBP11.94□□□□□ -0.5
SGCA-201ENST00000262018 FAM81AQ8TBF8 368 aa11.94□□□□□ -0.5
SGCA-201ENST00000262018 APH1BQ8WW43 257 aa11.94□□□□□ -0.5
SGCA-201ENST00000262018 ASB15Q8WXK1 588 aa11.94□□□□□ -0.5
SGCA-201ENST00000262018 UBE2FQ969M7 185 aa11.94□□□□□ -0.5
SGCA-201ENST00000262018 OMA1Q96E52 524 aa11.94□□□□□ -0.5
SGCA-201ENST00000262018 BCL7BQ9BQE9 202 aa11.94□□□□□ -0.5
SGCA-201ENST00000262018 YIPF3Q9GZM5 350 aa11.94□□□□□ -0.5
SGCA-201ENST00000262018 RBM38Q9H0Z9 239 aaKnown RBP11.94□□□□□ -0.5
SGCA-201ENST00000262018 KRCC1Q9NPI7 259 aaPredicted RBP11.94□□□□□ -0.5
SGCA-201ENST00000262018 EXOSC3Q9NQT5 275 aaKnown RBP11.94□□□□□ -0.5
SGCA-201ENST00000262018 HPF1Q9NWY4 346 aa11.94□□□□□ -0.5
SGCA-201ENST00000262018 ZNF226Q9NYT6 803 aa11.94□□□□□ -0.5
SGCA-201ENST00000262018 EXPH5Q8NEV8 1989 aa11.93□□□□□ -0.5
SGCA-201ENST00000262018 ARHGAP21Q5T5U3 1957 aa11.93□□□□□ -0.5
SGCA-201ENST00000262018 TRGV5A0A0B4J1U4 118 aa11.93□□□□□ -0.5
SGCA-201ENST00000262018 A0A1B0GWA3 101 aa11.93□□□□□ -0.5
SGCA-201ENST00000262018 CHP2O43745 196 aa11.93□□□□□ -0.5
SGCA-201ENST00000262018 ICOSLGO75144 302 aa11.93□□□□□ -0.5
SGCA-201ENST00000262018 HPGDP15428 266 aa11.93□□□□□ -0.5
SGCA-201ENST00000262018 ABCD3P28288 659 aa11.93□□□□□ -0.5
SGCA-201ENST00000262018 GSTT1P30711 240 aa11.93□□□□□ -0.5
SGCA-201ENST00000262018 KRT20P35900 424 aa11.93□□□□□ -0.5
SGCA-201ENST00000262018 TMED10P49755 219 aaKnown RBP11.93□□□□□ -0.5
SGCA-201ENST00000262018 CDC42P60953 191 aa11.93□□□□□ -0.5
SGCA-201ENST00000262018 SORDQ00796 357 aa11.93□□□□□ -0.5
SGCA-201ENST00000262018 ROR2Q01974 943 aaKnown RBP11.93□□□□□ -0.5
SGCA-201ENST00000262018 SLC10A1Q14973 349 aa11.93□□□□□ -0.5
SGCA-201ENST00000262018 CD226Q15762 336 aa11.93□□□□□ -0.5
SGCA-201ENST00000262018 C12orf73Q69YU5 71 aa11.93□□□□□ -0.5
SGCA-201ENST00000262018 POMZP3Q6PJE2 187 aa11.93□□□□□ -0.5
SGCA-201ENST00000262018 IL20RBQ6UXL0 311 aa11.93□□□□□ -0.5
SGCA-201ENST00000262018 WDR88Q6ZMY6 472 aa11.93□□□□□ -0.5
SGCA-201ENST00000262018 SATL1Q86VE3 508 aa11.93□□□□□ -0.5
SGCA-201ENST00000262018 NRMQ8IXM6 262 aa11.93□□□□□ -0.5
SGCA-201ENST00000262018 PRR22Q8IZ63 422 aa11.93□□□□□ -0.5
SGCA-201ENST00000262018 TMEM239Q8WW34 195 aa11.93□□□□□ -0.5
SGCA-201ENST00000262018 MPP4Q96JB8 637 aa11.93□□□□□ -0.5
SGCA-201ENST00000262018 HS6ST2Q96MM7 605 aa11.93□□□□□ -0.5
SGCA-201ENST00000262018 ADOQ96SZ5 270 aa11.93□□□□□ -0.5
SGCA-201ENST00000262018 CCL19Q99731 98 aa11.93□□□□□ -0.5
SGCA-201ENST00000262018 FAM173AQ9BQD7 235 aa11.93□□□□□ -0.5
SGCA-201ENST00000262018 PLCXD1Q9NUJ7 323 aa11.93□□□□□ -0.5
SGCA-201ENST00000262018 SPRR3Q9UBC9 169 aa11.93□□□□□ -0.5
SGCA-201ENST00000262018 ZNF629Q9UEG4 869 aaPredicted RBP11.93□□□□□ -0.5
SGCA-201ENST00000262018 RSL24D1Q9UHA3 163 aaKnown RBP11.93□□□□□ -0.5
SGCA-201ENST00000262018 PCDHGB1Q9Y5G3 927 aa11.93□□□□□ -0.5
SGCA-201ENST00000262018 OR6C70A6NIJ9 312 aa11.92□□□□□ -0.5
SGCA-201ENST00000262018 EEF1E1-BLOC1S5C9J1V9 151 aa11.92□□□□□ -0.5
SGCA-201ENST00000262018 EEF1E1O43324 174 aaKnown RBP11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms