RNA–Protein interactions for RNA: ENST00000261726.10

CUX2-201, Transcript of cut like homeobox 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CUX2, Length 6,844 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX2-201ENST00000261726 OPN5Q6U736 354 aa13.28□□□□□ -0.28
CUX2-201ENST00000261726 LRRTM3Q86VH5 581 aa13.28□□□□□ -0.28
CUX2-201ENST00000261726 OR13C9Q8NGT0 318 aa13.28□□□□□ -0.28
CUX2-201ENST00000261726 C12orf49Q9H741 205 aa13.28□□□□□ -0.28
CUX2-201ENST00000261726 ERVMER34-1Q9H9K5 563 aa13.28□□□□□ -0.28
CUX2-201ENST00000261726 IL37Q9NZH6 218 aa13.28□□□□□ -0.28
CUX2-201ENST00000261726 OSGIN1Q9UJX0 560 aa13.28□□□□□ -0.28
CUX2-201ENST00000261726 SIGLEC6O43699 453 aa13.28□□□□□ -0.28
CUX2-201ENST00000261726 ACP2P11117 423 aa13.28□□□□□ -0.28
CUX2-201ENST00000261726 SLC6A11P48066 632 aa13.28□□□□□ -0.28
CUX2-201ENST00000261726 GNB1P62873 340 aa13.28□□□□□ -0.28
CUX2-201ENST00000261726 TATDN3Q17R31 274 aa13.28□□□□□ -0.28
CUX2-201ENST00000261726 ARHGAP11BQ3KRB8 267 aa13.28□□□□□ -0.28
CUX2-201ENST00000261726 SLC36A2Q495M3 483 aa13.28□□□□□ -0.28
CUX2-201ENST00000261726 RBMS3Q6XE24 437 aaKnown RBP13.28□□□□□ -0.28
CUX2-201ENST00000261726 PLPP5Q8NEB5 264 aa13.28□□□□□ -0.28
CUX2-201ENST00000261726 TCEAL7Q9BRU2 100 aa13.28□□□□□ -0.28
CUX2-201ENST00000261726 UTP23Q9BRU9 249 aaKnown RBP13.28□□□□□ -0.28
CUX2-201ENST00000261726 EMC9Q9Y3B6 208 aa13.28□□□□□ -0.28
CUX2-201ENST00000261726 MYH14Q7Z406 1995 aaKnown RBP13.28□□□□□ -0.28
CUX2-201ENST00000261726 GPR39O43194 453 aa13.28□□□□□ -0.28
CUX2-201ENST00000261726 CNIH1O95406 144 aa13.28□□□□□ -0.28
CUX2-201ENST00000261726 C1orf105O95561 183 aa13.28□□□□□ -0.28
CUX2-201ENST00000261726 DPP4P27487 766 aa13.28□□□□□ -0.28
CUX2-201ENST00000261726 DMWDQ09019 674 aa13.28□□□□□ -0.28
CUX2-201ENST00000261726 ZNF718Q3SXZ3 478 aa13.28□□□□□ -0.28
CUX2-201ENST00000261726 LEXMQ3ZCV2 418 aa13.28□□□□□ -0.28
CUX2-201ENST00000261726 DCAF12Q5T6F0 453 aa13.28□□□□□ -0.28
CUX2-201ENST00000261726 NKAIN2Q5VXU1 208 aa13.28□□□□□ -0.28
CUX2-201ENST00000261726 BATF2Q8N1L9 274 aa13.28□□□□□ -0.28
CUX2-201ENST00000261726 WDR83Q9BRX9 315 aaKnown RBP13.28□□□□□ -0.28
CUX2-201ENST00000261726 C1orf198Q9H425 327 aa13.28□□□□□ -0.28
CUX2-201ENST00000261726 PURGQ9UJV8 347 aaKnown RBP13.28□□□□□ -0.28
CUX2-201ENST00000261726 OR5H15A6NDH6 313 aa13.28□□□□□ -0.28
CUX2-201ENST00000261726 OR5H14A6NHG9 310 aa13.28□□□□□ -0.28
CUX2-201ENST00000261726 OR5H1A6NKK0 313 aa13.28□□□□□ -0.28
CUX2-201ENST00000261726 BCAT2O15382 392 aaPredicted RBP13.28□□□□□ -0.28
CUX2-201ENST00000261726 TIMP1P01033 207 aa13.28□□□□□ -0.28
CUX2-201ENST00000261726 C21orf33P30042 268 aaPredicted RBP13.28□□□□□ -0.28
CUX2-201ENST00000261726 CTBSQ01459 385 aa13.28□□□□□ -0.28
CUX2-201ENST00000261726 GK3PQ14409 553 aa13.28□□□□□ -0.28
CUX2-201ENST00000261726 BCL7AQ4VC05 210 aa13.28□□□□□ -0.28
CUX2-201ENST00000261726 SLC30A7Q8NEW0 376 aa13.28□□□□□ -0.28
CUX2-201ENST00000261726 TFAP2CQ92754 450 aa13.28□□□□□ -0.28
CUX2-201ENST00000261726 ARRDC3Q96B67 414 aa13.28□□□□□ -0.28
CUX2-201ENST00000261726 OR6C1Q96RD1 312 aa13.28□□□□□ -0.28
CUX2-201ENST00000261726 PAPPAQ13219 1627 aa13.28□□□□□ -0.28
CUX2-201ENST00000261726 SEC14L6B5MCN3 397 aa13.28□□□□□ -0.28
CUX2-201ENST00000261726 EFSO43281 561 aa13.28□□□□□ -0.28
CUX2-201ENST00000261726 GPX3P22352 226 aa13.28□□□□□ -0.28
CUX2-201ENST00000261726 EPHA5P54756 1037 aa13.28□□□□□ -0.28
CUX2-201ENST00000261726 PBX4Q9BYU1 374 aa13.28□□□□□ -0.28
CUX2-201ENST00000261726 RANGRFQ9HD47 186 aaPredicted RBP13.28□□□□□ -0.28
CUX2-201ENST00000261726 MRPS28Q9Y2Q9 187 aaKnown RBP13.28□□□□□ -0.28
CUX2-201ENST00000261726 OR8U8P0C7N1 319 aa13.27□□□□□ -0.28
CUX2-201ENST00000261726 TGM1P22735 817 aa13.27□□□□□ -0.28
CUX2-201ENST00000261726 BLVRBP30043 206 aaPredicted RBP13.27□□□□□ -0.28
CUX2-201ENST00000261726 EMX1Q04741 257 aaPredicted RBP13.27□□□□□ -0.28
CUX2-201ENST00000261726 CCDC71Q8IV32 467 aaPredicted RBP13.27□□□□□ -0.28
CUX2-201ENST00000261726 SUMF1Q8NBK3 374 aa13.27□□□□□ -0.28
CUX2-201ENST00000261726 ZBTB32Q9Y2Y4 487 aaPredicted RBP13.27□□□□□ -0.28
CUX2-201ENST00000261726 PHF1O43189 567 aaPredicted RBP13.27□□□□□ -0.28
CUX2-201ENST00000261726 GJB3O75712 270 aa13.27□□□□□ -0.28
CUX2-201ENST00000261726 TNFSF8P32971 234 aa13.27□□□□□ -0.28
CUX2-201ENST00000261726 DEFA6Q01524 100 aa13.27□□□□□ -0.28
CUX2-201ENST00000261726 TMEM104Q8NE00 496 aa13.27□□□□□ -0.28
CUX2-201ENST00000261726 NOX4Q9NPH5 578 aa13.27□□□□□ -0.28
CUX2-201ENST00000261726 C1GALT1Q9NS00 363 aa13.27□□□□□ -0.28
CUX2-201ENST00000261726 NKX6-3A6NJ46 265 aa13.27□□□□□ -0.28
CUX2-201ENST00000261726 CDK4P11802 303 aa13.27□□□□□ -0.28
CUX2-201ENST00000261726 HIST1H1TP22492 207 aaPredicted RBP13.27□□□□□ -0.28
CUX2-201ENST00000261726 HBG1P69891 147 aa13.27□□□□□ -0.28
CUX2-201ENST00000261726 HBG2P69892 147 aa13.27□□□□□ -0.28
CUX2-201ENST00000261726 SLC35A2P78381 396 aa13.27□□□□□ -0.28
CUX2-201ENST00000261726 ZNF691Q5VV52 312 aa13.27□□□□□ -0.28
CUX2-201ENST00000261726 LACC1Q8IV20 430 aa13.27□□□□□ -0.28
CUX2-201ENST00000261726 LINC00346Q8IVM7 164 aa13.27□□□□□ -0.28
CUX2-201ENST00000261726 OR56B1Q8NGI3 324 aa13.27□□□□□ -0.28
CUX2-201ENST00000261726 TMEM40Q8WWA1 233 aa13.27□□□□□ -0.28
CUX2-201ENST00000261726 GGHQ92820 318 aa13.27□□□□□ -0.28
CUX2-201ENST00000261726 ARPC5LQ9BPX5 153 aa13.27□□□□□ -0.28
CUX2-201ENST00000261726 FAM173AQ9BQD7 235 aa13.27□□□□□ -0.28
CUX2-201ENST00000261726 KATNB1Q9BVA0 655 aa13.27□□□□□ -0.28
CUX2-201ENST00000261726 INPP5EQ9NRR6 644 aa13.27□□□□□ -0.28
CUX2-201ENST00000261726 SSUH2Q9Y2M2 353 aa13.27□□□□□ -0.28
CUX2-201ENST00000261726 PCDHGA5Q9Y5G8 931 aa13.27□□□□□ -0.28
CUX2-201ENST00000261726 TMEM72A0PK05 275 aa13.27□□□□□ -0.29
CUX2-201ENST00000261726 CD38P28907 300 aa13.27□□□□□ -0.29
CUX2-201ENST00000261726 SSR4P51571 173 aa13.27□□□□□ -0.29
CUX2-201ENST00000261726 CCL11P51671 97 aa13.27□□□□□ -0.29
CUX2-201ENST00000261726 BORCS6Q96GS4 357 aa13.27□□□□□ -0.29
CUX2-201ENST00000261726 FAM212BQ9NTI7 297 aaPredicted RBP13.27□□□□□ -0.29
CUX2-201ENST00000261726 MRPL22Q9NWU5 206 aaKnown RBP13.27□□□□□ -0.29
CUX2-201ENST00000261726 CDHR4A6H8M9 788 aa13.27□□□□□ -0.29
CUX2-201ENST00000261726 PTGESO14684 152 aa13.27□□□□□ -0.29
CUX2-201ENST00000261726 ZNF264O43296 627 aa13.27□□□□□ -0.29
CUX2-201ENST00000261726 GALR3O60755 368 aaPredicted RBP13.27□□□□□ -0.29
CUX2-201ENST00000261726 ZNF623O75123 536 aa13.27□□□□□ -0.29
CUX2-201ENST00000261726 GRPP07492 148 aa13.27□□□□□ -0.29
CUX2-201ENST00000261726 ITGAMP11215 1152 aa13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms