RNA–Protein interactions for RNA: ENST00000260130.8

SDCBP-201, Transcript of syndecan binding protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SDCBP, Length 2,167 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-201ENST00000260130 TMED7-TICAM2A0A0A6YYA0 188 aa15.01□□□□□ -0.01
SDCBP-201ENST00000260130 SLC1A7O00341 560 aa15.01□□□□□ -0.01
SDCBP-201ENST00000260130 DVL2O14641 736 aa15.01□□□□□ -0.01
SDCBP-201ENST00000260130 SERPINA1P01009 418 aa15.01□□□□□ -0.01
SDCBP-201ENST00000260130 OPN1SWP03999 348 aa15.01□□□□□ -0.01
SDCBP-201ENST00000260130 ISL1P61371 349 aa15.01□□□□□ -0.01
SDCBP-201ENST00000260130 HOXC5Q00444 222 aa15.01□□□□□ -0.01
SDCBP-201ENST00000260130 DUSP7Q16829 419 aa15.01□□□□□ -0.01
SDCBP-201ENST00000260130 OR2A2Q6IF42 318 aa15.01□□□□□ -0.01
SDCBP-201ENST00000260130 ANKRD13BQ86YJ7 626 aa15.01□□□□□ -0.01
SDCBP-201ENST00000260130 SETD9Q8NE22 299 aa15.01□□□□□ -0.01
SDCBP-201ENST00000260130 ZNF566Q969W8 418 aa15.01□□□□□ -0.01
SDCBP-201ENST00000260130 PRRG4Q9BZD6 226 aa15.01□□□□□ -0.01
SDCBP-201ENST00000260130 MCTS1Q9ULC4 181 aaKnown RBP15.01□□□□□ -0.01
SDCBP-201ENST00000260130 TMED7Q9Y3B3 224 aa15.01□□□□□ -0.01
SDCBP-201ENST00000260130 A0A1W2PNR3 127 aa15.01□□□□□ -0.01
SDCBP-201ENST00000260130 FAM90A27PA6NNH2 459 aa15.01□□□□□ -0.01
SDCBP-201ENST00000260130 PRSS44E7EML9 344 aa15.01□□□□□ -0.01
SDCBP-201ENST00000260130 SYNGR4O95473 234 aa15.01□□□□□ -0.01
SDCBP-201ENST00000260130 BMP5P22003 454 aa15.01□□□□□ -0.01
SDCBP-201ENST00000260130 MAP2K6P52564 334 aa15.01□□□□□ -0.01
SDCBP-201ENST00000260130 FOXF2Q12947 444 aa15.01□□□□□ -0.01
SDCBP-201ENST00000260130 RGS21Q2M5E4 152 aa15.01□□□□□ -0.01
SDCBP-201ENST00000260130 SYT14P1Q58G82 188 aa15.01□□□□□ -0.01
SDCBP-201ENST00000260130 PYURFQ96I23 114 aa15.01□□□□□ -0.01
SDCBP-201ENST00000260130 OR5B2Q96R09 309 aa15.01□□□□□ -0.01
SDCBP-201ENST00000260130 DGCR6LQ9BY27 220 aa15.01□□□□□ -0.01
SDCBP-201ENST00000260130 EVA1AQ9H8M9 152 aa15.01□□□□□ -0.01
SDCBP-201ENST00000260130 ERGIC3Q9Y282 383 aa15.01□□□□□ -0.01
SDCBP-201ENST00000260130 ICE1Q9Y2F5 2266 aa15□□□□□ -0.01
SDCBP-201ENST00000260130 KIAA1549Q9HCM3 1950 aa15□□□□□ -0.01
SDCBP-201ENST00000260130 SULT1C4O75897 302 aa15□□□□□ -0.01
SDCBP-201ENST00000260130 LGI1O95970 557 aa15□□□□□ -0.01
SDCBP-201ENST00000260130 FCGR2AP12318 317 aa15□□□□□ -0.01
SDCBP-201ENST00000260130 OPRM1P35372 400 aa15□□□□□ -0.01
SDCBP-201ENST00000260130 KCNJ5P48544 419 aa15□□□□□ -0.01
SDCBP-201ENST00000260130 SLC25A35Q3KQZ1 300 aa15□□□□□ -0.01
SDCBP-201ENST00000260130 GCNT2Q8N0V5 402 aa15□□□□□ -0.01
SDCBP-201ENST00000260130 SGCDQ92629 289 aa15□□□□□ -0.01
SDCBP-201ENST00000260130 CPNE4Q96A23 557 aaPredicted RBP15□□□□□ -0.01
SDCBP-201ENST00000260130 TAMM41Q96BW9 452 aa15□□□□□ -0.01
SDCBP-201ENST00000260130 ZNF347Q96SE7 839 aa15□□□□□ -0.01
SDCBP-201ENST00000260130 RNF122Q9H9V4 155 aa15□□□□□ -0.01
SDCBP-201ENST00000260130 PCDHGB1Q9Y5G3 927 aa15□□□□□ -0.01
SDCBP-201ENST00000260130 FLNBO75369 2602 aaKnown RBP15□□□□□ -0.01
SDCBP-201ENST00000260130 NKX2-6A6NCS4 301 aa15□□□□□ -0.01
SDCBP-201ENST00000260130 ZNF99A8MXY4 864 aaPredicted RBP15□□□□□ -0.01
SDCBP-201ENST00000260130 J3QRK9 145 aa15□□□□□ -0.01
SDCBP-201ENST00000260130 AQP8O94778 261 aa15□□□□□ -0.01
SDCBP-201ENST00000260130 IL18BPO95998 194 aa15□□□□□ -0.01
SDCBP-201ENST00000260130 TFPIP10646 304 aa15□□□□□ -0.01
SDCBP-201ENST00000260130 CXCR1P25024 350 aa15□□□□□ -0.01
SDCBP-201ENST00000260130 CLK1P49759 484 aaKnown RBP15□□□□□ -0.01
SDCBP-201ENST00000260130 AGFG1P52594 562 aaKnown RBP15□□□□□ -0.01
SDCBP-201ENST00000260130 ZNF846Q147U1 533 aa15□□□□□ -0.01
SDCBP-201ENST00000260130 SHQ1Q6PI26 577 aaKnown RBP15□□□□□ -0.01
SDCBP-201ENST00000260130 LINC00299Q6ZSB3 139 aa15□□□□□ -0.01
SDCBP-201ENST00000260130 GPR32P1Q8NGA4 272 aa15□□□□□ -0.01
SDCBP-201ENST00000260130 FBLIM1Q8WUP2 373 aa15□□□□□ -0.01
SDCBP-201ENST00000260130 RASSF5Q8WWW0 418 aa15□□□□□ -0.01
SDCBP-201ENST00000260130 SRXN1Q9BYN0 137 aa15□□□□□ -0.01
SDCBP-201ENST00000260130 SAMD4AQ9UPU9 718 aaKnown RBP15□□□□□ -0.01
SDCBP-201ENST00000260130 ARHGAP21Q5T5U3 1957 aa14.99□□□□□ -0.01
SDCBP-201ENST00000260130 FUOMA2VDF0 154 aa14.99□□□□□ -0.01
SDCBP-201ENST00000260130 SYT5O00445 386 aa14.99□□□□□ -0.01
SDCBP-201ENST00000260130 ZNF208O43345 1280 aa14.99□□□□□ -0.01
SDCBP-201ENST00000260130 CRHP06850 196 aa14.99□□□□□ -0.01
SDCBP-201ENST00000260130 PCMT1P22061 227 aa14.99□□□□□ -0.01
SDCBP-201ENST00000260130 GRNP28799 593 aaKnown RBP14.99□□□□□ -0.01
SDCBP-201ENST00000260130 BCAP31P51572 246 aa14.99□□□□□ -0.01
SDCBP-201ENST00000260130 ARHGDIAP52565 204 aa14.99□□□□□ -0.01
SDCBP-201ENST00000260130 CRYBA2P53672 197 aa14.99□□□□□ -0.01
SDCBP-201ENST00000260130 RGS8P57771 180 aaPredicted RBP14.99□□□□□ -0.01
SDCBP-201ENST00000260130 RAC3P60763 192 aa14.99□□□□□ -0.01
SDCBP-201ENST00000260130 EEF1A1P5Q5VTE0 462 aa14.99□□□□□ -0.01
SDCBP-201ENST00000260130 SLC16A12Q6ZSM3 486 aa14.99□□□□□ -0.01
SDCBP-201ENST00000260130 TMPPEQ6ZT21 453 aa14.99□□□□□ -0.01
SDCBP-201ENST00000260130 TMEM179BQ7Z7N9 219 aa14.99□□□□□ -0.01
SDCBP-201ENST00000260130 PARP8Q8N3A8 854 aa14.99□□□□□ -0.01
SDCBP-201ENST00000260130 LSMEM1Q8N8F7 131 aa14.99□□□□□ -0.01
SDCBP-201ENST00000260130 WFDC6Q9BQY6 131 aa14.99□□□□□ -0.01
SDCBP-201ENST00000260130 SFXN3Q9BWM7 321 aa14.99□□□□□ -0.01
SDCBP-201ENST00000260130 GABARAPL1Q9H0R8 117 aa14.99□□□□□ -0.01
SDCBP-201ENST00000260130 CHST11Q9NPF2 352 aa14.99□□□□□ -0.01
SDCBP-201ENST00000260130 TMEFF2Q9UIK5 374 aaPredicted RBP14.99□□□□□ -0.01
SDCBP-201ENST00000260130 CORINQ9Y5Q5 1042 aa14.99□□□□□ -0.01
SDCBP-201ENST00000260130 HSPE1-MOB4S4R3N1 261 aa14.99□□□□□ -0.01
SDCBP-201ENST00000260130 TMEM72A0PK05 275 aa14.98□□□□□ -0.01
SDCBP-201ENST00000260130 CLDN25C9JDP6 229 aa14.98□□□□□ -0.01
SDCBP-201ENST00000260130 PTGES3LE9PB15 166 aa14.98□□□□□ -0.01
SDCBP-201ENST00000260130 PRKACGP22612 351 aa14.98□□□□□ -0.01
SDCBP-201ENST00000260130 IGFBP5P24593 272 aa14.98□□□□□ -0.01
SDCBP-201ENST00000260130 COL8A1P27658 744 aa14.98□□□□□ -0.01
SDCBP-201ENST00000260130 MAGEA2P43356 314 aa14.98□□□□□ -0.01
SDCBP-201ENST00000260130 IL5RAQ01344 420 aa14.98□□□□□ -0.01
SDCBP-201ENST00000260130 CDK5R2Q13319 367 aa14.98□□□□□ -0.01
SDCBP-201ENST00000260130 SPCS2Q15005 226 aa14.98□□□□□ -0.01
SDCBP-201ENST00000260130 LAIR2Q6ISS4 152 aa14.98□□□□□ -0.01
SDCBP-201ENST00000260130 RELL2Q8NC24 303 aaPredicted RBP14.98□□□□□ -0.01
SDCBP-201ENST00000260130 C3orf49Q96BT1 292 aa14.98□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms