RNA–Protein interactions for RNA: ENST00000257604.9

TRAFD1-201, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

APPRIS P2 TSL 2 BASIC

Gene TRAFD1, Length 3,178 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-201ENST00000257604 ASPMQ8IZT6 3477 aa13.37□□□□□ -0.27
TRAFD1-201ENST00000257604 A0A0B4J203 849 aa13.37□□□□□ -0.27
TRAFD1-201ENST00000257604 TEX13CA0A0J9YWL9 993 aa13.37□□□□□ -0.27
TRAFD1-201ENST00000257604 TEX51A0A1B0GUA7 166 aa13.37□□□□□ -0.27
TRAFD1-201ENST00000257604 MASP2O00187 686 aa13.37□□□□□ -0.27
TRAFD1-201ENST00000257604 BHLHE40O14503 412 aa13.37□□□□□ -0.27
TRAFD1-201ENST00000257604 DOK2O60496 412 aa13.37□□□□□ -0.27
TRAFD1-201ENST00000257604 HK1P19367 917 aa13.37□□□□□ -0.27
TRAFD1-201ENST00000257604 TACR3P29371 465 aa13.37□□□□□ -0.27
TRAFD1-201ENST00000257604 HTR1FP30939 366 aa13.37□□□□□ -0.27
TRAFD1-201ENST00000257604 GRK6P43250 576 aa13.37□□□□□ -0.27
TRAFD1-201ENST00000257604 PLK5Q496M5 336 aa13.37□□□□□ -0.27
TRAFD1-201ENST00000257604 C3orf38Q5JPI3 329 aa13.37□□□□□ -0.27
TRAFD1-201ENST00000257604 MZT2BQ6NZ67 158 aa13.37□□□□□ -0.27
TRAFD1-201ENST00000257604 ZCCHC12Q6PEW1 402 aa13.37□□□□□ -0.27
TRAFD1-201ENST00000257604 ESPNLQ6ZVH7 1005 aa13.37□□□□□ -0.27
TRAFD1-201ENST00000257604 ZNF550Q7Z398 422 aa13.37□□□□□ -0.27
TRAFD1-201ENST00000257604 ZNF615Q8N8J6 731 aa13.37□□□□□ -0.27
TRAFD1-201ENST00000257604 FAM181AQ8N9Y4 354 aa13.37□□□□□ -0.27
TRAFD1-201ENST00000257604 MCCC2Q9HCC0 563 aa13.37□□□□□ -0.27
TRAFD1-201ENST00000257604 PRODH2Q9UF12 536 aa13.37□□□□□ -0.27
TRAFD1-201ENST00000257604 LOC105371267A0A1B0GV96 52 aa13.36□□□□□ -0.27
TRAFD1-201ENST00000257604 H3BUI4 141 aa13.36□□□□□ -0.27
TRAFD1-201ENST00000257604 NUPL2O15504 423 aaKnown RBP13.36□□□□□ -0.27
TRAFD1-201ENST00000257604 C1QBP02746 253 aa13.36□□□□□ -0.27
TRAFD1-201ENST00000257604 HLA-DMAP28067 261 aa13.36□□□□□ -0.27
TRAFD1-201ENST00000257604 SLC37A1P57057 533 aa13.36□□□□□ -0.27
TRAFD1-201ENST00000257604 RRAS2P62070 204 aaPredicted RBP13.36□□□□□ -0.27
TRAFD1-201ENST00000257604 ZSWIM7Q19AV6 140 aa13.36□□□□□ -0.27
TRAFD1-201ENST00000257604 HYAL4Q2M3T9 481 aa13.36□□□□□ -0.27
TRAFD1-201ENST00000257604 LEG1Q6P5S2 330 aa13.36□□□□□ -0.27
TRAFD1-201ENST00000257604 MSANTD3Q96H12 275 aa13.36□□□□□ -0.27
TRAFD1-201ENST00000257604 OR11A1Q9GZK7 315 aa13.36□□□□□ -0.27
TRAFD1-201ENST00000257604 PPP1R3EQ9H7J1 279 aa13.36□□□□□ -0.27
TRAFD1-201ENST00000257604 LANCL2Q9NS86 450 aa13.36□□□□□ -0.27
TRAFD1-201ENST00000257604 EXOSC1Q9Y3B2 195 aaKnown RBP13.36□□□□□ -0.27
TRAFD1-201ENST00000257604 KIF26BQ2KJY2 2108 aa13.36□□□□□ -0.27
TRAFD1-201ENST00000257604 KDM4EB2RXH2 506 aaPredicted RBP13.36□□□□□ -0.27
TRAFD1-201ENST00000257604 SHC1P29353 583 aa13.36□□□□□ -0.27
TRAFD1-201ENST00000257604 SLC6A6P31641 620 aa13.36□□□□□ -0.27
TRAFD1-201ENST00000257604 CTXN1P60606 82 aa13.36□□□□□ -0.27
TRAFD1-201ENST00000257604 CCL7P80098 99 aa13.36□□□□□ -0.27
TRAFD1-201ENST00000257604 FGFBP1Q14512 234 aa13.36□□□□□ -0.27
TRAFD1-201ENST00000257604 C17orf47Q8NEP4 570 aa13.36□□□□□ -0.27
TRAFD1-201ENST00000257604 STT3BQ8TCJ2 826 aa13.36□□□□□ -0.27
TRAFD1-201ENST00000257604 KTI12Q96EK9 354 aaPredicted RBP13.36□□□□□ -0.27
TRAFD1-201ENST00000257604 DPCDQ9BVM2 203 aaPredicted RBP13.36□□□□□ -0.27
TRAFD1-201ENST00000257604 UBQLN4Q9NRR5 601 aa13.36□□□□□ -0.27
TRAFD1-201ENST00000257604 GABRPO00591 440 aa13.36□□□□□ -0.27
TRAFD1-201ENST00000257604 HRGP04196 525 aa13.36□□□□□ -0.27
TRAFD1-201ENST00000257604 GABRA4P48169 554 aa13.36□□□□□ -0.27
TRAFD1-201ENST00000257604 STARD6P59095 220 aa13.36□□□□□ -0.27
TRAFD1-201ENST00000257604 MAB21L1Q13394 359 aa13.36□□□□□ -0.27
TRAFD1-201ENST00000257604 SNTA1Q13424 505 aa13.36□□□□□ -0.27
TRAFD1-201ENST00000257604 ZNF613Q6PF04 617 aa13.36□□□□□ -0.27
TRAFD1-201ENST00000257604 ZNF322Q6U7Q0 402 aaPredicted RBP13.36□□□□□ -0.27
TRAFD1-201ENST00000257604 IZUMO1Q8IYV9 350 aa13.36□□□□□ -0.27
TRAFD1-201ENST00000257604 ARHGEF39Q8N4T4 335 aa13.36□□□□□ -0.27
TRAFD1-201ENST00000257604 OR5J2Q8NH18 312 aa13.36□□□□□ -0.27
TRAFD1-201ENST00000257604 C1orf216Q8TAB5 229 aa13.36□□□□□ -0.27
TRAFD1-201ENST00000257604 AP3S1Q92572 193 aa13.36□□□□□ -0.27
TRAFD1-201ENST00000257604 C3orf49Q96BT1 292 aa13.36□□□□□ -0.27
TRAFD1-201ENST00000257604 ZFP3Q96NJ6 502 aa13.36□□□□□ -0.27
TRAFD1-201ENST00000257604 EXTL2Q9UBQ6 330 aa13.36□□□□□ -0.27
TRAFD1-201ENST00000257604 SF3B6Q9Y3B4 125 aaKnown RBP13.36□□□□□ -0.27
TRAFD1-201ENST00000257604 LEUTXA8MZ59 168 aa13.35□□□□□ -0.27
TRAFD1-201ENST00000257604 EEF1E1O43324 174 aaKnown RBP13.35□□□□□ -0.27
TRAFD1-201ENST00000257604 KLF4O43474 513 aa13.35□□□□□ -0.27
TRAFD1-201ENST00000257604 RPS4Y1P22090 263 aaKnown RBP13.35□□□□□ -0.27
TRAFD1-201ENST00000257604 GAS1P54826 345 aa13.35□□□□□ -0.27
TRAFD1-201ENST00000257604 CLDN6P56747 220 aa13.35□□□□□ -0.27
TRAFD1-201ENST00000257604 OR10A3P58181 314 aa13.35□□□□□ -0.27
TRAFD1-201ENST00000257604 SERTAD2Q14140 314 aa13.35□□□□□ -0.27
TRAFD1-201ENST00000257604 HLA-BQ31612 363 aa13.35□□□□□ -0.27
TRAFD1-201ENST00000257604 GARNL3Q5VVW2 1013 aa13.35□□□□□ -0.27
TRAFD1-201ENST00000257604 SLC29A4Q7RTT9 530 aa13.35□□□□□ -0.27
TRAFD1-201ENST00000257604 PLCZ1Q86YW0 608 aa13.35□□□□□ -0.27
TRAFD1-201ENST00000257604 GCDHQ92947 438 aaPredicted RBP13.35□□□□□ -0.27
TRAFD1-201ENST00000257604 LCORQ96JN0 433 aaPredicted RBP13.35□□□□□ -0.27
TRAFD1-201ENST00000257604 ATF6BQ99941 703 aa13.35□□□□□ -0.27
TRAFD1-201ENST00000257604 PDCD1LG2Q9BQ51 273 aa13.35□□□□□ -0.27
TRAFD1-201ENST00000257604 ARHGAP9Q9BRR9 750 aa13.35□□□□□ -0.27
TRAFD1-201ENST00000257604 ANKRD19PQ9H560 264 aa13.35□□□□□ -0.27
TRAFD1-201ENST00000257604 PRDM9Q9NQV7 894 aa13.35□□□□□ -0.27
TRAFD1-201ENST00000257604 KLHL21Q9UJP4 597 aa13.35□□□□□ -0.27
TRAFD1-201ENST00000257604 A0A087WV48 116 aa13.35□□□□□ -0.27
TRAFD1-201ENST00000257604 K7ESF4 209 aa13.35□□□□□ -0.27
TRAFD1-201ENST00000257604 ZNF264O43296 627 aa13.35□□□□□ -0.27
TRAFD1-201ENST00000257604 NUDT21O43809 227 aaKnown RBP13.35□□□□□ -0.27
TRAFD1-201ENST00000257604 ALOX12BO75342 701 aa13.35□□□□□ -0.27
TRAFD1-201ENST00000257604 TSPAN9O75954 239 aa13.35□□□□□ -0.27
TRAFD1-201ENST00000257604 NDUFB2O95178 105 aa13.35□□□□□ -0.27
TRAFD1-201ENST00000257604 IFNGP01579 166 aa13.35□□□□□ -0.27
TRAFD1-201ENST00000257604 CXCR1P25024 350 aa13.35□□□□□ -0.27
TRAFD1-201ENST00000257604 NUDT1P36639 197 aa13.35□□□□□ -0.27
TRAFD1-201ENST00000257604 ZNF433Q8N7K0 673 aaPredicted RBP13.35□□□□□ -0.27
TRAFD1-201ENST00000257604 OR8K3Q8NH51 312 aa13.35□□□□□ -0.27
TRAFD1-201ENST00000257604 GPR119Q8TDV5 335 aa13.35□□□□□ -0.27
TRAFD1-201ENST00000257604 MS4A3Q96HJ5 214 aa13.35□□□□□ -0.27
TRAFD1-201ENST00000257604 NKX3-1Q99801 234 aaPredicted RBP13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms