RNA–Protein interactions for RNA: ENST00000257548.9

USP30-201, Transcript of ubiquitin specific peptidase 30, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP30, Length 3,742 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP30-201ENST00000257548 NPC1O15118 1278 aa11.37□□□□□ -0.59
USP30-201ENST00000257548 RAB6AP20340 208 aa11.37□□□□□ -0.59
USP30-201ENST00000257548 CSF2RBP32927 897 aa11.37□□□□□ -0.59
USP30-201ENST00000257548 P2RX1P51575 399 aa11.37□□□□□ -0.59
USP30-201ENST00000257548 SNTB1Q13884 538 aaKnown RBP11.37□□□□□ -0.59
USP30-201ENST00000257548 RNASE10Q5GAN6 216 aaKnown RBP11.37□□□□□ -0.59
USP30-201ENST00000257548 FAM209BQ5JX69 171 aa11.37□□□□□ -0.59
USP30-201ENST00000257548 EXOSC6Q5RKV6 272 aaKnown RBP11.37□□□□□ -0.59
USP30-201ENST00000257548 PARS2Q7L3T8 475 aaKnown RBP11.37□□□□□ -0.59
USP30-201ENST00000257548 ZNF584Q8IVC4 421 aa11.37□□□□□ -0.59
USP30-201ENST00000257548 OR4K14Q8NGD5 310 aa11.37□□□□□ -0.59
USP30-201ENST00000257548 RASD2Q96D21 266 aa11.37□□□□□ -0.59
USP30-201ENST00000257548 CHST6Q9GZX3 395 aa11.37□□□□□ -0.59
USP30-201ENST00000257548 ISYNA1Q9NPH2 558 aa11.37□□□□□ -0.59
USP30-201ENST00000257548 TAS2R5Q9NYW4 299 aa11.37□□□□□ -0.59
USP30-201ENST00000257548 IL20Q9NYY1 176 aa11.37□□□□□ -0.59
USP30-201ENST00000257548 ZNF230Q9UIE0 474 aaPredicted RBP11.37□□□□□ -0.59
USP30-201ENST00000257548 TGM6O95932 706 aa11.36□□□□□ -0.59
USP30-201ENST00000257548 AKAIN1P0CW23 69 aa11.36□□□□□ -0.59
USP30-201ENST00000257548 RIN1Q13671 783 aa11.36□□□□□ -0.59
USP30-201ENST00000257548 GUCA2BQ16661 112 aa11.36□□□□□ -0.59
USP30-201ENST00000257548 HACD4Q5VWC8 232 aa11.36□□□□□ -0.59
USP30-201ENST00000257548 SHEQ5VZ18 495 aa11.36□□□□□ -0.59
USP30-201ENST00000257548 C17orf99Q6UX52 265 aa11.36□□□□□ -0.59
USP30-201ENST00000257548 ARIH2OSQ8N7S6 290 aa11.36□□□□□ -0.59
USP30-201ENST00000257548 OR51Q1Q8NH59 317 aa11.36□□□□□ -0.59
USP30-201ENST00000257548 ATOH1Q92858 354 aaPredicted RBP11.36□□□□□ -0.59
USP30-201ENST00000257548 IRF7Q92985 503 aa11.36□□□□□ -0.59
USP30-201ENST00000257548 ZNF514Q96K75 400 aaPredicted RBP11.36□□□□□ -0.59
USP30-201ENST00000257548 C10orf90Q96M02 699 aa11.36□□□□□ -0.59
USP30-201ENST00000257548 SLC38A1Q9H2H9 487 aa11.36□□□□□ -0.59
USP30-201ENST00000257548 RETREG1Q9H6L5 497 aa11.36□□□□□ -0.59
USP30-201ENST00000257548 PLXNB2O15031 1838 aa11.36□□□□□ -0.59
USP30-201ENST00000257548 MFSD2BA6NFX1 497 aa11.36□□□□□ -0.59
USP30-201ENST00000257548 XKRYO14609 159 aa11.36□□□□□ -0.59
USP30-201ENST00000257548 CXCL14O95715 111 aa11.36□□□□□ -0.59
USP30-201ENST00000257548 F3P13726 295 aa11.36□□□□□ -0.59
USP30-201ENST00000257548 NME2P22392 152 aa11.36□□□□□ -0.59
USP30-201ENST00000257548 BSGP35613 385 aa11.36□□□□□ -0.59
USP30-201ENST00000257548 MEOX2P50222 304 aa11.36□□□□□ -0.59
USP30-201ENST00000257548 RAB13P51153 203 aa11.36□□□□□ -0.59
USP30-201ENST00000257548 HENMT1Q5T8I9 393 aaKnown RBP11.36□□□□□ -0.59
USP30-201ENST00000257548 STEAP1BQ6NZ63 245 aa11.36□□□□□ -0.59
USP30-201ENST00000257548 ZNF101Q8IZC7 436 aa11.36□□□□□ -0.59
USP30-201ENST00000257548 BPIFB2Q8N4F0 458 aa11.36□□□□□ -0.59
USP30-201ENST00000257548 POMGNT2Q8NAT1 580 aa11.36□□□□□ -0.59
USP30-201ENST00000257548 ACBD4Q8NC06 268 aa11.36□□□□□ -0.59
USP30-201ENST00000257548 SETD7Q8WTS6 366 aaKnown RBP11.36□□□□□ -0.59
USP30-201ENST00000257548 SIRT3Q9NTG7 399 aaPredicted RBP11.36□□□□□ -0.59
USP30-201ENST00000257548 KCMF1Q9P0J7 381 aa11.36□□□□□ -0.59
USP30-201ENST00000257548 ZNF629Q9UEG4 869 aaPredicted RBP11.36□□□□□ -0.59
USP30-201ENST00000257548 WDR87Q6ZQQ6 2873 aa11.36□□□□□ -0.59
USP30-201ENST00000257548 MYOFQ9NZM1 2061 aa11.36□□□□□ -0.59
USP30-201ENST00000257548 ZNF736B4DX44 427 aaPredicted RBP11.36□□□□□ -0.59
USP30-201ENST00000257548 BET1O15155 118 aa11.36□□□□□ -0.59
USP30-201ENST00000257548 OIP5O43482 229 aa11.36□□□□□ -0.59
USP30-201ENST00000257548 SIGLEC6O43699 453 aa11.36□□□□□ -0.59
USP30-201ENST00000257548 CTNSO60931 367 aa11.36□□□□□ -0.59
USP30-201ENST00000257548 PRNPP04156 253 aa11.36□□□□□ -0.59
USP30-201ENST00000257548 FABP1P07148 127 aa11.36□□□□□ -0.59
USP30-201ENST00000257548 SPARCP09486 303 aa11.36□□□□□ -0.59
USP30-201ENST00000257548 SPP1P10451 314 aa11.36□□□□□ -0.59
USP30-201ENST00000257548 HIST1H1CP16403 213 aaKnown RBP11.36□□□□□ -0.59
USP30-201ENST00000257548 BTCP35070 178 aa11.36□□□□□ -0.59
USP30-201ENST00000257548 RAB33AQ14088 237 aa11.36□□□□□ -0.59
USP30-201ENST00000257548 PDZD11Q5EBL8 140 aa11.36□□□□□ -0.59
USP30-201ENST00000257548 NHLRC3Q5JS37 347 aa11.36□□□□□ -0.59
USP30-201ENST00000257548 RGS7BPQ6MZT1 257 aaPredicted RBP11.36□□□□□ -0.59
USP30-201ENST00000257548 C3orf33Q6P1S2 294 aa11.36□□□□□ -0.59
USP30-201ENST00000257548 ENPP7Q6UWV6 458 aa11.36□□□□□ -0.59
USP30-201ENST00000257548 HIST2H2ABQ8IUE6 130 aaPredicted RBP11.36□□□□□ -0.59
USP30-201ENST00000257548 LRRC25Q8N386 305 aaPredicted RBP11.36□□□□□ -0.59
USP30-201ENST00000257548 HGDQ93099 445 aa11.36□□□□□ -0.59
USP30-201ENST00000257548 PELI1Q96FA3 418 aa11.36□□□□□ -0.59
USP30-201ENST00000257548 RBM18Q96H35 190 aaKnown RBP11.36□□□□□ -0.59
USP30-201ENST00000257548 SPHK1Q9NYA1 384 aa11.36□□□□□ -0.59
USP30-201ENST00000257548 POM121BA6NF01 834 aa11.35□□□□□ -0.59
USP30-201ENST00000257548 SNAPINO95295 136 aa11.35□□□□□ -0.59
USP30-201ENST00000257548 HLA-DQB1P01920 261 aa11.35□□□□□ -0.59
USP30-201ENST00000257548 TEAD2Q15562 447 aa11.35□□□□□ -0.59
USP30-201ENST00000257548 GAREM2Q75VX8 874 aa11.35□□□□□ -0.59
USP30-201ENST00000257548 DPY19L4Q7Z388 723 aa11.35□□□□□ -0.59
USP30-201ENST00000257548 OR4D10Q8NGI6 311 aa11.35□□□□□ -0.59
USP30-201ENST00000257548 OR1J4Q8NGS1 313 aa11.35□□□□□ -0.59
USP30-201ENST00000257548 NR4A3Q92570 626 aa11.35□□□□□ -0.59
USP30-201ENST00000257548 IGSF21Q96ID5 467 aa11.35□□□□□ -0.59
USP30-201ENST00000257548 RNF186Q9NXI6 227 aa11.35□□□□□ -0.59
USP30-201ENST00000257548 OPN4Q9UHM6 478 aa11.35□□□□□ -0.59
USP30-201ENST00000257548 MYLKQ15746 1914 aa11.35□□□□□ -0.59
USP30-201ENST00000257548 TET1Q8NFU7 2136 aa11.35□□□□□ -0.59
USP30-201ENST00000257548 ZNF208O43345 1280 aa11.35□□□□□ -0.59
USP30-201ENST00000257548 LATS1O95835 1130 aa11.35□□□□□ -0.59
USP30-201ENST00000257548 RECKO95980 971 aa11.35□□□□□ -0.59
USP30-201ENST00000257548 CNR1P21554 472 aa11.35□□□□□ -0.59
USP30-201ENST00000257548 BDKRB2P30411 391 aa11.35□□□□□ -0.59
USP30-201ENST00000257548 AVPR2P30518 371 aa11.35□□□□□ -0.59
USP30-201ENST00000257548 NTHL1P78549 312 aa11.35□□□□□ -0.59
USP30-201ENST00000257548 SREBF2Q12772 1141 aa11.35□□□□□ -0.59
USP30-201ENST00000257548 DUSP5Q16690 384 aa11.35□□□□□ -0.59
USP30-201ENST00000257548 TRMT12Q53H54 448 aaKnown RBP11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms