RNA–Protein interactions for RNA: ENST00000257181.9

PRPF38A-201, Transcript of pre-mRNA processing factor 38A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF38A, Length 5,274 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38A-201ENST00000257181 CLDN15P56746 228 aa12.34□□□□□ -0.43
PRPF38A-201ENST00000257181 CLN3Q13286 438 aa12.34□□□□□ -0.43
PRPF38A-201ENST00000257181 SPRED3Q2MJR0 410 aa12.34□□□□□ -0.43
PRPF38A-201ENST00000257181 EEF1AKMT2Q5JPI9 291 aaKnown RBP12.34□□□□□ -0.43
PRPF38A-201ENST00000257181 ZNF683Q8IZ20 524 aa12.34□□□□□ -0.43
PRPF38A-201ENST00000257181 UPRTQ96BW1 309 aa12.34□□□□□ -0.43
PRPF38A-201ENST00000257181 A0A0G2JMP0 313 aa12.34□□□□□ -0.43
PRPF38A-201ENST00000257181 BPNT1O95861 308 aa12.34□□□□□ -0.43
PRPF38A-201ENST00000257181 OR8B8Q15620 311 aa12.34□□□□□ -0.43
PRPF38A-201ENST00000257181 KCTD21Q4G0X4 260 aa12.34□□□□□ -0.43
PRPF38A-201ENST00000257181 PRAMEF17Q5VTA0 474 aa12.34□□□□□ -0.43
PRPF38A-201ENST00000257181 HACD4Q5VWC8 232 aa12.34□□□□□ -0.43
PRPF38A-201ENST00000257181 OR4M2Q8NGB6 313 aa12.34□□□□□ -0.43
PRPF38A-201ENST00000257181 MED28Q9H204 178 aa12.34□□□□□ -0.43
PRPF38A-201ENST00000257181 BARX1Q9HBU1 254 aaPredicted RBP12.34□□□□□ -0.43
PRPF38A-201ENST00000257181 OR2J2O76002 312 aa12.33□□□□□ -0.43
PRPF38A-201ENST00000257181 RPL22L1Q6P5R6 122 aaKnown RBP12.33□□□□□ -0.43
PRPF38A-201ENST00000257181 TPRA1Q86W33 373 aa12.33□□□□□ -0.43
PRPF38A-201ENST00000257181 SNTG1Q9NSN8 517 aa12.33□□□□□ -0.43
PRPF38A-201ENST00000257181 IGHV5-10-1A0A0J9YXX1 117 aa12.33□□□□□ -0.44
PRPF38A-201ENST00000257181 KCNK2O95069 426 aa12.33□□□□□ -0.44
PRPF38A-201ENST00000257181 CD3EP07766 207 aa12.33□□□□□ -0.44
PRPF38A-201ENST00000257181 TMIGD3P0DMS9 266 aaPredicted RBP12.33□□□□□ -0.44
PRPF38A-201ENST00000257181 HBA1P69905 142 aa12.33□□□□□ -0.44
PRPF38A-201ENST00000257181 TSTQ16762 297 aaKnown RBP12.33□□□□□ -0.44
PRPF38A-201ENST00000257181 PLBD1Q6P4A8 553 aa12.33□□□□□ -0.44
PRPF38A-201ENST00000257181 TMPRSS9Q7Z410 1059 aa12.33□□□□□ -0.44
PRPF38A-201ENST00000257181 OR5D16Q8NGK9 328 aa12.33□□□□□ -0.44
PRPF38A-201ENST00000257181 ATG5Q9H1Y0 275 aa12.33□□□□□ -0.44
PRPF38A-201ENST00000257181 STUB1Q9UNE7 303 aa12.33□□□□□ -0.44
PRPF38A-201ENST00000257181 CMAHPQ9Y471 501 aa12.33□□□□□ -0.44
PRPF38A-201ENST00000257181 SPINT2O43291 252 aa12.33□□□□□ -0.44
PRPF38A-201ENST00000257181 MT-ND1P03886 318 aa12.33□□□□□ -0.44
PRPF38A-201ENST00000257181 OR2T7P0C7T2 308 aa12.33□□□□□ -0.44
PRPF38A-201ENST00000257181 PYCR1P32322 319 aa12.33□□□□□ -0.44
PRPF38A-201ENST00000257181 MSX2P35548 267 aaPredicted RBP12.33□□□□□ -0.44
PRPF38A-201ENST00000257181 CDC20Q12834 499 aa12.33□□□□□ -0.44
PRPF38A-201ENST00000257181 RGS7BPQ6MZT1 257 aaPredicted RBP12.33□□□□□ -0.44
PRPF38A-201ENST00000257181 PGBD2Q6P3X8 592 aa12.33□□□□□ -0.44
PRPF38A-201ENST00000257181 NKAIN3Q8N8D7 197 aa12.33□□□□□ -0.44
PRPF38A-201ENST00000257181 OR2T27Q8NH04 317 aa12.33□□□□□ -0.44
PRPF38A-201ENST00000257181 CD248Q9HCU0 757 aa12.33□□□□□ -0.44
PRPF38A-201ENST00000257181 VNN3Q9NY84 501 aa12.33□□□□□ -0.44
PRPF38A-201ENST00000257181 KIF13BQ9NQT8 1826 aa12.33□□□□□ -0.44
PRPF38A-201ENST00000257181 A0A1W2PQF6 199 aa12.33□□□□□ -0.44
PRPF38A-201ENST00000257181 IFI6P09912 130 aa12.33□□□□□ -0.44
PRPF38A-201ENST00000257181 ZNF16P17020 682 aaPredicted RBP12.33□□□□□ -0.44
PRPF38A-201ENST00000257181 ECI1P42126 302 aa12.33□□□□□ -0.44
PRPF38A-201ENST00000257181 MSMO1Q15800 293 aa12.33□□□□□ -0.44
PRPF38A-201ENST00000257181 PLA1AQ53H76 456 aa12.33□□□□□ -0.44
PRPF38A-201ENST00000257181 C6orf52Q5T4I8 152 aa12.33□□□□□ -0.44
PRPF38A-201ENST00000257181 PLAG1Q6DJT9 500 aa12.33□□□□□ -0.44
PRPF38A-201ENST00000257181 ZNF701Q9NV72 531 aaPredicted RBP12.33□□□□□ -0.44
PRPF38A-201ENST00000257181 GIMAP2Q9UG22 337 aa12.33□□□□□ -0.44
PRPF38A-201ENST00000257181 OR14I1A6ND48 311 aa12.32□□□□□ -0.44
PRPF38A-201ENST00000257181 CREB1P16220 341 aa12.32□□□□□ -0.44
PRPF38A-201ENST00000257181 DDOSTP39656 456 aa12.32□□□□□ -0.44
PRPF38A-201ENST00000257181 UBE2IP63279 158 aaKnown RBP12.32□□□□□ -0.44
PRPF38A-201ENST00000257181 RNF220Q5VTB9 566 aa12.32□□□□□ -0.44
PRPF38A-201ENST00000257181 NPSR1Q6W5P4 371 aa12.32□□□□□ -0.44
PRPF38A-201ENST00000257181 CEACAM19Q7Z692 300 aa12.32□□□□□ -0.44
PRPF38A-201ENST00000257181 VRK2Q86Y07 508 aa12.32□□□□□ -0.44
PRPF38A-201ENST00000257181 C17orf47Q8NEP4 570 aa12.32□□□□□ -0.44
PRPF38A-201ENST00000257181 OR51T1Q8NGJ9 327 aa12.32□□□□□ -0.44
PRPF38A-201ENST00000257181 UBL7Q96S82 380 aaPredicted RBP12.32□□□□□ -0.44
PRPF38A-201ENST00000257181 SEMA4CQ9C0C4 833 aa12.32□□□□□ -0.44
PRPF38A-201ENST00000257181 PLK3Q9H4B4 646 aa12.32□□□□□ -0.44
PRPF38A-201ENST00000257181 A0A1B0GWA3 101 aa12.32□□□□□ -0.44
PRPF38A-201ENST00000257181 M0R3H8 397 aa12.32□□□□□ -0.44
PRPF38A-201ENST00000257181 DLGAP1O14490 977 aa12.32□□□□□ -0.44
PRPF38A-201ENST00000257181 SGCEO43556 437 aa12.32□□□□□ -0.44
PRPF38A-201ENST00000257181 ITGAMP11215 1152 aa12.32□□□□□ -0.44
PRPF38A-201ENST00000257181 GRPRP30550 384 aa12.32□□□□□ -0.44
PRPF38A-201ENST00000257181 MAGEA2P43356 314 aa12.32□□□□□ -0.44
PRPF38A-201ENST00000257181 ERVK-25P63136 954 aa12.32□□□□□ -0.44
PRPF38A-201ENST00000257181 RPS26P11Q5JNZ5 115 aaPredicted RBP12.32□□□□□ -0.44
PRPF38A-201ENST00000257181 CCL4L1Q8NHW4 92 aa12.32□□□□□ -0.44
PRPF38A-201ENST00000257181 COQ8AQ8NI60 647 aa12.32□□□□□ -0.44
PRPF38A-201ENST00000257181 CREB3L1Q96BA8 519 aa12.32□□□□□ -0.44
PRPF38A-201ENST00000257181 MACROD1Q9BQ69 325 aa12.32□□□□□ -0.44
PRPF38A-201ENST00000257181 TMEM269A0A1B0GVZ9 245 aa12.32□□□□□ -0.44
PRPF38A-201ENST00000257181 INMTO95050 263 aa12.32□□□□□ -0.44
PRPF38A-201ENST00000257181 ETV4P43268 484 aa12.32□□□□□ -0.44
PRPF38A-201ENST00000257181 NKG7Q16617 165 aa12.32□□□□□ -0.44
PRPF38A-201ENST00000257181 FAM180BQ6P0A1 224 aa12.32□□□□□ -0.44
PRPF38A-201ENST00000257181 YRDCQ86U90 279 aaKnown RBP12.32□□□□□ -0.44
PRPF38A-201ENST00000257181 KLBQ86Z14 1044 aa12.32□□□□□ -0.44
PRPF38A-201ENST00000257181 PIAS4Q8N2W9 510 aaPredicted RBP12.32□□□□□ -0.44
PRPF38A-201ENST00000257181 FAM156AQ8NDB6 213 aa12.32□□□□□ -0.44
PRPF38A-201ENST00000257181 CHRNA10Q9GZZ6 450 aa12.32□□□□□ -0.44
PRPF38A-201ENST00000257181 FN3KRPQ9HA64 309 aa12.32□□□□□ -0.44
PRPF38A-201ENST00000257181 EXOSC3Q9NQT5 275 aaKnown RBP12.32□□□□□ -0.44
PRPF38A-201ENST00000257181 IL20RAQ9UHF4 553 aa12.32□□□□□ -0.44
PRPF38A-201ENST00000257181 TMEM127O75204 238 aa12.32□□□□□ -0.44
PRPF38A-201ENST00000257181 GJB3O75712 270 aa12.32□□□□□ -0.44
PRPF38A-201ENST00000257181 ARRB2P32121 409 aa12.32□□□□□ -0.44
PRPF38A-201ENST00000257181 INO80EQ8NBZ0 244 aaPredicted RBP12.32□□□□□ -0.44
PRPF38A-201ENST00000257181 OR5H2Q8NGV7 314 aa12.32□□□□□ -0.44
PRPF38A-201ENST00000257181 RNF128Q8TEB7 428 aa12.32□□□□□ -0.44
PRPF38A-201ENST00000257181 ZDHHC16Q969W1 377 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms