RNA–Protein interactions for RNA: ENST00000254816.5

TRIM47-201, Transcript of tripartite motif containing 47, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM47, Length 2,266 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-201ENST00000254816 GPR87Q9BY21 358 aa17.09■□□□□ 0.33
TRIM47-201ENST00000254816 NRIP3Q9NQ35 241 aa17.09■□□□□ 0.33
TRIM47-201ENST00000254816 WDR70Q9NW82 654 aa17.09■□□□□ 0.33
TRIM47-201ENST00000254816 A3GALT2U3KPV4 340 aa17.09■□□□□ 0.33
TRIM47-201ENST00000254816 A8MVM7 634 aa17.09■□□□□ 0.33
TRIM47-201ENST00000254816 C21orf140B9A014 251 aa17.09■□□□□ 0.33
TRIM47-201ENST00000254816 TAF4O00268 1085 aa17.09■□□□□ 0.33
TRIM47-201ENST00000254816 MYL12BO14950 172 aa17.09■□□□□ 0.33
TRIM47-201ENST00000254816 ICAM2P13598 275 aa17.09■□□□□ 0.33
TRIM47-201ENST00000254816 IL11P20809 199 aa17.09■□□□□ 0.33
TRIM47-201ENST00000254816 SOX6P35712 828 aa17.09■□□□□ 0.33
TRIM47-201ENST00000254816 FOXK1P85037 733 aa17.09■□□□□ 0.33
TRIM47-201ENST00000254816 RPL18Q07020 188 aaKnown RBP17.09■□□□□ 0.33
TRIM47-201ENST00000254816 ALG10Q5BKT4 473 aa17.09■□□□□ 0.33
TRIM47-201ENST00000254816 C1orf140Q5VVS0 124 aa17.09■□□□□ 0.33
TRIM47-201ENST00000254816 MEPCEQ7L2J0 689 aaKnown RBP17.09■□□□□ 0.33
TRIM47-201ENST00000254816 NANOGNBQ7Z5D8 188 aa17.09■□□□□ 0.33
TRIM47-201ENST00000254816 LRRC75AQ8NAA5 344 aa17.09■□□□□ 0.33
TRIM47-201ENST00000254816 OR2M3Q8NG83 312 aa17.09■□□□□ 0.33
TRIM47-201ENST00000254816 OR5M1Q8NGP8 315 aa17.09■□□□□ 0.33
TRIM47-201ENST00000254816 OR9Q1Q8NGQ5 310 aa17.09■□□□□ 0.33
TRIM47-201ENST00000254816 FGF20Q9NP95 211 aaPredicted RBP17.09■□□□□ 0.33
TRIM47-201ENST00000254816 ZNF229Q9UJW7 825 aa17.09■□□□□ 0.33
TRIM47-201ENST00000254816 ZFHX2Q9C0A1 2572 aaPredicted RBP17.08■□□□□ 0.33
TRIM47-201ENST00000254816 PNMA8CA0A1B0GUJ8 204 aa17.08■□□□□ 0.33
TRIM47-201ENST00000254816 HTR3EA5X5Y0 456 aa17.08■□□□□ 0.33
TRIM47-201ENST00000254816 NPIPB7O75200 414 aa17.08■□□□□ 0.33
TRIM47-201ENST00000254816 UQCRC1P31930 480 aa17.08■□□□□ 0.33
TRIM47-201ENST00000254816 ZNF41P51814 821 aaPredicted RBP17.08■□□□□ 0.33
TRIM47-201ENST00000254816 CTXN1P60606 82 aa17.08■□□□□ 0.33
TRIM47-201ENST00000254816 RPS7P62081 194 aaKnown RBP17.08■□□□□ 0.33
TRIM47-201ENST00000254816 KHDRBS1Q07666 443 aaKnown RBP eCLIP17.08■□□□□ 0.33
TRIM47-201ENST00000254816 GID4Q8IVV7 300 aa17.08■□□□□ 0.33
TRIM47-201ENST00000254816 CADM3Q8N126 398 aa17.08■□□□□ 0.33
TRIM47-201ENST00000254816 SLC43A2Q8N370 569 aa17.08■□□□□ 0.33
TRIM47-201ENST00000254816 MINDY2Q8NBR6 621 aa17.08■□□□□ 0.33
TRIM47-201ENST00000254816 OR51G2Q8NGK0 314 aa17.08■□□□□ 0.33
TRIM47-201ENST00000254816 ZPLD1Q8TCW7 415 aa17.08■□□□□ 0.33
TRIM47-201ENST00000254816 HTRA1Q92743 480 aa17.08■□□□□ 0.33
TRIM47-201ENST00000254816 ASPNQ9BXN1 380 aa17.08■□□□□ 0.33
TRIM47-201ENST00000254816 FKRPQ9H9S5 495 aa17.08■□□□□ 0.33
TRIM47-201ENST00000254816 HPF1Q9NWY4 346 aa17.08■□□□□ 0.33
TRIM47-201ENST00000254816 CELSR3Q9NYQ7 3312 aa17.08■□□□□ 0.32
TRIM47-201ENST00000254816 CTDSP2O14595 271 aa17.08■□□□□ 0.32
TRIM47-201ENST00000254816 HIST1H2ABP04908 130 aa17.08■□□□□ 0.32
TRIM47-201ENST00000254816 HTR3AP46098 478 aa17.08■□□□□ 0.32
TRIM47-201ENST00000254816 CHAF1BQ13112 559 aa17.08■□□□□ 0.32
TRIM47-201ENST00000254816 TMEM44Q2T9K0 475 aa17.08■□□□□ 0.32
TRIM47-201ENST00000254816 HIST3H2AQ7L7L0 130 aa17.08■□□□□ 0.32
TRIM47-201ENST00000254816 MDGA2Q7Z553 956 aa17.08■□□□□ 0.32
TRIM47-201ENST00000254816 LHFPL3Q86UP9 236 aa17.08■□□□□ 0.32
TRIM47-201ENST00000254816 IL22RA1Q8N6P7 574 aa17.08■□□□□ 0.32
TRIM47-201ENST00000254816 HIST1H2ACQ93077 130 aa17.08■□□□□ 0.32
TRIM47-201ENST00000254816 KISS1RQ969F8 398 aaPredicted RBP17.08■□□□□ 0.32
TRIM47-201ENST00000254816 Q96M85 177 aa17.08■□□□□ 0.32
TRIM47-201ENST00000254816 NMNAT3Q96T66 252 aa17.08■□□□□ 0.32
TRIM47-201ENST00000254816 NUAK2Q9H093 628 aa17.08■□□□□ 0.32
TRIM47-201ENST00000254816 FREM3P0C091 2139 aa17.08■□□□□ 0.32
TRIM47-201ENST00000254816 IGLV3-32A0A0A0MS00 114 aa17.07■□□□□ 0.32
TRIM47-201ENST00000254816 CCDC182A6NF36 153 aa17.07■□□□□ 0.32
TRIM47-201ENST00000254816 IFNGP01579 166 aa17.07■□□□□ 0.32
TRIM47-201ENST00000254816 MSX1P28360 303 aa17.07■□□□□ 0.32
TRIM47-201ENST00000254816 ATP6V1E1P36543 226 aa17.07■□□□□ 0.32
TRIM47-201ENST00000254816 RPS19P39019 145 aaKnown RBP17.07■□□□□ 0.32
TRIM47-201ENST00000254816 CD79BP40259 229 aa17.07■□□□□ 0.32
TRIM47-201ENST00000254816 CRYBB2P43320 205 aa17.07■□□□□ 0.32
TRIM47-201ENST00000254816 TGM4P49221 684 aa17.07■□□□□ 0.32
TRIM47-201ENST00000254816 TGIF1Q15583 401 aa17.07■□□□□ 0.32
TRIM47-201ENST00000254816 PLPPR5Q32ZL2 321 aa17.07■□□□□ 0.32
TRIM47-201ENST00000254816 OR2G6Q5TZ20 316 aa17.07■□□□□ 0.32
TRIM47-201ENST00000254816 TUBA3EQ6PEY2 450 aa17.07■□□□□ 0.32
TRIM47-201ENST00000254816 PROKR2Q8NFJ6 384 aa17.07■□□□□ 0.32
TRIM47-201ENST00000254816 POC1BQ8TC44 478 aa17.07■□□□□ 0.32
TRIM47-201ENST00000254816 NKD1Q969G9 470 aa17.07■□□□□ 0.32
TRIM47-201ENST00000254816 ARL5BQ96KC2 179 aa17.07■□□□□ 0.32
TRIM47-201ENST00000254816 RERGLQ9H628 205 aa17.07■□□□□ 0.32
TRIM47-201ENST00000254816 PROK2Q9HC23 129 aa17.07■□□□□ 0.32
TRIM47-201ENST00000254816 PEX16Q9Y5Y5 336 aa17.07■□□□□ 0.32
TRIM47-201ENST00000254816 MED12Q93074 2177 aa17.07■□□□□ 0.32
TRIM47-201ENST00000254816 TEX13CA0A0J9YWL9 993 aa17.07■□□□□ 0.32
TRIM47-201ENST00000254816 C11orf98E9PRG8 122 aa17.07■□□□□ 0.32
TRIM47-201ENST00000254816 LRRTM2O43300 516 aa17.07■□□□□ 0.32
TRIM47-201ENST00000254816 EFNA2O43921 213 aa17.07■□□□□ 0.32
TRIM47-201ENST00000254816 FAM69AQ5T7M9 428 aa17.07■□□□□ 0.32
TRIM47-201ENST00000254816 ARMC10Q8N2F6 343 aa17.07■□□□□ 0.32
TRIM47-201ENST00000254816 OR4K17Q8NGC6 315 aa17.07■□□□□ 0.32
TRIM47-201ENST00000254816 OR51L1Q8NGJ5 315 aa17.07■□□□□ 0.32
TRIM47-201ENST00000254816 THOC3Q96J01 351 aaKnown RBP17.07■□□□□ 0.32
TRIM47-201ENST00000254816 GPX7Q96SL4 187 aaPredicted RBP17.07■□□□□ 0.32
TRIM47-201ENST00000254816 TEAD3Q99594 435 aa17.07■□□□□ 0.32
TRIM47-201ENST00000254816 BARHL1Q9BZE3 327 aa17.07■□□□□ 0.32
TRIM47-201ENST00000254816 CPNE5Q9HCH3 593 aa17.07■□□□□ 0.32
TRIM47-201ENST00000254816 NDUFB11Q9NX14 153 aa17.07■□□□□ 0.32
TRIM47-201ENST00000254816 TAS2R5Q9NYW4 299 aa17.07■□□□□ 0.32
TRIM47-201ENST00000254816 EXOGQ9Y2C4 368 aaKnown RBP17.07■□□□□ 0.32
TRIM47-201ENST00000254816 H3BML4 177 aa17.06■□□□□ 0.32
TRIM47-201ENST00000254816 F10P00742 488 aa17.06■□□□□ 0.32
TRIM47-201ENST00000254816 OPN1LWP04000 364 aa17.06■□□□□ 0.32
TRIM47-201ENST00000254816 SERPINA7P05543 415 aa17.06■□□□□ 0.32
TRIM47-201ENST00000254816 MRPL3P09001 348 aaKnown RBP17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms