RNA–Protein interactions for RNA: ENST00000254667.7

PTPRE-201, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPRE, Length 5,331 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-201ENST00000254667 MMP28Q9H239 520 aa17.53■□□□□ 0.4
PTPRE-201ENST00000254667 MRPS2Q9Y399 296 aaKnown RBP17.53■□□□□ 0.4
PTPRE-201ENST00000254667 DLX5P56178 289 aa17.53■□□□□ 0.4
PTPRE-201ENST00000254667 CLVS2Q5SYC1 327 aa17.53■□□□□ 0.4
PTPRE-201ENST00000254667 DEDD2Q8WXF8 326 aa17.53■□□□□ 0.4
PTPRE-201ENST00000254667 NMNAT3Q96T66 252 aa17.53■□□□□ 0.4
PTPRE-201ENST00000254667 SGPP1Q9BX95 441 aa17.53■□□□□ 0.4
PTPRE-201ENST00000254667 THBS1P07996 1170 aa17.53■□□□□ 0.4
PTPRE-201ENST00000254667 DLSTP36957 453 aa17.53■□□□□ 0.4
PTPRE-201ENST00000254667 EPHA5P54756 1037 aa17.53■□□□□ 0.4
PTPRE-201ENST00000254667 CRMP1Q14194 572 aa17.53■□□□□ 0.4
PTPRE-201ENST00000254667 SLC35D2Q76EJ3 337 aa17.53■□□□□ 0.4
PTPRE-201ENST00000254667 LRRC18Q8N456 261 aa17.53■□□□□ 0.4
PTPRE-201ENST00000254667 NOX3Q9HBY0 568 aa17.53■□□□□ 0.4
PTPRE-201ENST00000254667 GHRLQ9UBU3 117 aa17.53■□□□□ 0.4
PTPRE-201ENST00000254667 MYH14Q7Z406 1995 aaKnown RBP17.53■□□□□ 0.4
PTPRE-201ENST00000254667 PLRG1O43660 514 aaKnown RBP17.53■□□□□ 0.4
PTPRE-201ENST00000254667 KLK8O60259 260 aa17.53■□□□□ 0.4
PTPRE-201ENST00000254667 TK1P04183 234 aa17.53■□□□□ 0.4
PTPRE-201ENST00000254667 EPHA1P21709 976 aa17.53■□□□□ 0.4
PTPRE-201ENST00000254667 RPL23AP62750 156 aaKnown RBP17.53■□□□□ 0.4
PTPRE-201ENST00000254667 UBALD2Q8IYN6 164 aa17.53■□□□□ 0.4
PTPRE-201ENST00000254667 CLDN22Q8N7P3 220 aa17.53■□□□□ 0.4
PTPRE-201ENST00000254667 OR11L1Q8NGX0 322 aa17.53■□□□□ 0.4
PTPRE-201ENST00000254667 ZBTB8AQ96BR9 441 aa17.53■□□□□ 0.4
PTPRE-201ENST00000254667 MED20Q9H944 212 aa17.53■□□□□ 0.4
PTPRE-201ENST00000254667 IL21Q9HBE4 155 aa17.53■□□□□ 0.4
PTPRE-201ENST00000254667 TRBV5-4A0A0C4DH59 114 aa17.52■□□□□ 0.4
PTPRE-201ENST00000254667 FCRLAQ7L513 359 aa17.52■□□□□ 0.4
PTPRE-201ENST00000254667 C12orf45Q8N5I9 185 aaPredicted RBP17.52■□□□□ 0.4
PTPRE-201ENST00000254667 OR4M1Q8NGD0 313 aa17.52■□□□□ 0.4
PTPRE-201ENST00000254667 RHOXF1Q8NHV9 184 aa17.52■□□□□ 0.4
PTPRE-201ENST00000254667 ATOH1Q92858 354 aaPredicted RBP17.52■□□□□ 0.4
PTPRE-201ENST00000254667 CMSS1Q9BQ75 279 aaKnown RBP17.52■□□□□ 0.4
PTPRE-201ENST00000254667 BOLA2-SMG1P6H3BVE0 249 aa17.52■□□□□ 0.4
PTPRE-201ENST00000254667 ARPC5O15511 151 aa17.52■□□□□ 0.4
PTPRE-201ENST00000254667 NSA2O95478 260 aaKnown RBP17.52■□□□□ 0.4
PTPRE-201ENST00000254667 UBCP0CG48 685 aaKnown RBP17.52■□□□□ 0.4
PTPRE-201ENST00000254667 RBM39Q14498 530 aaKnown RBP17.52■□□□□ 0.4
PTPRE-201ENST00000254667 SPCS2Q15005 226 aa17.52■□□□□ 0.4
PTPRE-201ENST00000254667 SMAD2Q15796 467 aaKnown RBP17.52■□□□□ 0.4
PTPRE-201ENST00000254667 AGAP7PQ5VUJ5 663 aa17.52■□□□□ 0.4
PTPRE-201ENST00000254667 AGAP6Q5VW22 663 aa17.52■□□□□ 0.4
PTPRE-201ENST00000254667 PARP16Q8N5Y8 322 aa17.52■□□□□ 0.4
PTPRE-201ENST00000254667 ESX1Q8N693 406 aa17.52■□□□□ 0.4
PTPRE-201ENST00000254667 BAHD1Q8TBE0 780 aaPredicted RBP17.52■□□□□ 0.4
PTPRE-201ENST00000254667 ELMOD3Q96FG2 381 aa17.52■□□□□ 0.4
PTPRE-201ENST00000254667 AGAP4Q96P64 663 aa17.52■□□□□ 0.4
PTPRE-201ENST00000254667 SSX5O60225 188 aa17.52■□□□□ 0.4
PTPRE-201ENST00000254667 BMP1P13497 986 aa17.52■□□□□ 0.4
PTPRE-201ENST00000254667 ZNF750Q32MQ0 723 aa17.52■□□□□ 0.4
PTPRE-201ENST00000254667 COX15Q7KZN9 410 aa17.52■□□□□ 0.4
PTPRE-201ENST00000254667 BPHLQ86WA6 291 aaPredicted RBP17.52■□□□□ 0.4
PTPRE-201ENST00000254667 ENTHD1Q8IYW4 607 aa17.52■□□□□ 0.4
PTPRE-201ENST00000254667 CCDC74AQ96AQ1 378 aa17.52■□□□□ 0.4
PTPRE-201ENST00000254667 SLA2Q9H6Q3 261 aa17.52■□□□□ 0.4
PTPRE-201ENST00000254667 MYOTQ9UBF9 498 aa17.52■□□□□ 0.4
PTPRE-201ENST00000254667 A0A1W2PQ09 198 aa17.52■□□□□ 0.39
PTPRE-201ENST00000254667 ZNF814B7Z6K7 855 aa17.52■□□□□ 0.39
PTPRE-201ENST00000254667 GPR137BO60478 399 aa17.52■□□□□ 0.39
PTPRE-201ENST00000254667 ARHGAP11BQ3KRB8 267 aa17.52■□□□□ 0.39
PTPRE-201ENST00000254667 C1orf140Q5VVS0 124 aa17.52■□□□□ 0.39
PTPRE-201ENST00000254667 OR52N1Q8NH53 320 aa17.52■□□□□ 0.39
PTPRE-201ENST00000254667 OR6C76A6NM76 312 aa17.51■□□□□ 0.39
PTPRE-201ENST00000254667 H7C1C5 153 aa17.51■□□□□ 0.39
PTPRE-201ENST00000254667 TSPAN15O95858 294 aa17.51■□□□□ 0.39
PTPRE-201ENST00000254667 APOBEC1P41238 236 aaKnown RBP17.51■□□□□ 0.39
PTPRE-201ENST00000254667 SNRPGP62308 76 aaKnown RBP17.51■□□□□ 0.39
PTPRE-201ENST00000254667 LCN6P62502 163 aa17.51■□□□□ 0.39
PTPRE-201ENST00000254667 GK2Q14410 553 aaPredicted RBP17.51■□□□□ 0.39
PTPRE-201ENST00000254667 DUSP7Q16829 419 aa17.51■□□□□ 0.39
PTPRE-201ENST00000254667 DLEU7Q6UYE1 221 aa17.51■□□□□ 0.39
PTPRE-201ENST00000254667 NPSR1Q6W5P4 371 aa17.51■□□□□ 0.39
PTPRE-201ENST00000254667 SLC16A9Q7RTY1 509 aa17.51■□□□□ 0.39
PTPRE-201ENST00000254667 CAMKMTQ7Z624 323 aa17.51■□□□□ 0.39
PTPRE-201ENST00000254667 KCNG3Q8TAE7 436 aa17.51■□□□□ 0.39
PTPRE-201ENST00000254667 PPT2Q9UMR5 302 aa17.51■□□□□ 0.39
PTPRE-201ENST00000254667 ZNF587BE7ETH6 402 aa17.51■□□□□ 0.39
PTPRE-201ENST00000254667 IL2RGP31785 369 aa17.51■□□□□ 0.39
PTPRE-201ENST00000254667 SLC19A1P41440 591 aa17.51■□□□□ 0.39
PTPRE-201ENST00000254667 MTCP1P56278 107 aa17.51■□□□□ 0.39
PTPRE-201ENST00000254667 KIF18BQ86Y91 864 aa17.51■□□□□ 0.39
PTPRE-201ENST00000254667 GHSRQ92847 366 aa17.51■□□□□ 0.39
PTPRE-201ENST00000254667 LINC00615Q96LM1 132 aaPredicted RBP17.51■□□□□ 0.39
PTPRE-201ENST00000254667 CTRCQ99895 268 aa17.51■□□□□ 0.39
PTPRE-201ENST00000254667 SEMA4GQ9NTN9 838 aa17.51■□□□□ 0.39
PTPRE-201ENST00000254667 RNF212BA8MTL3 300 aa17.51■□□□□ 0.39
PTPRE-201ENST00000254667 DPM1O60762 260 aa17.51■□□□□ 0.39
PTPRE-201ENST00000254667 IGFBP6P24592 240 aaPredicted RBP17.51■□□□□ 0.39
PTPRE-201ENST00000254667 HTR2CP28335 458 aa17.51■□□□□ 0.39
PTPRE-201ENST00000254667 ARL3P36405 182 aa17.51■□□□□ 0.39
PTPRE-201ENST00000254667 BCL2A1Q16548 175 aa17.51■□□□□ 0.39
PTPRE-201ENST00000254667 MEX3BQ6ZN04 569 aaKnown RBP17.51■□□□□ 0.39
PTPRE-201ENST00000254667 MARCH3Q86UD3 253 aa17.51■□□□□ 0.39
PTPRE-201ENST00000254667 RPS19BP1Q86WX3 136 aaKnown RBP17.51■□□□□ 0.39
PTPRE-201ENST00000254667 KLHDC8BQ8IXV7 354 aa17.51■□□□□ 0.39
PTPRE-201ENST00000254667 ARL11Q969Q4 196 aa17.51■□□□□ 0.39
PTPRE-201ENST00000254667 NOX4Q9NPH5 578 aa17.51■□□□□ 0.39
PTPRE-201ENST00000254667 SSC5DA1L4H1 1573 aa17.51■□□□□ 0.39
PTPRE-201ENST00000254667 POM121BA6NF01 834 aa17.51■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms