RNA–Protein interactions for RNA: ENST00000252597.7

USHBP1-201, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USHBP1, Length 3,335 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-201ENST00000252597 FRKP42685 505 aaPredicted RBP10.99□□□□□ -0.65
USHBP1-201ENST00000252597 AP3S2P59780 193 aa10.99□□□□□ -0.65
USHBP1-201ENST00000252597 ERVK-21P61565 698 aa10.99□□□□□ -0.65
USHBP1-201ENST00000252597 SLC6A19Q695T7 634 aa10.99□□□□□ -0.65
USHBP1-201ENST00000252597 DPY19L4Q7Z388 723 aa10.99□□□□□ -0.65
USHBP1-201ENST00000252597 OR9A4Q8NGU2 314 aa10.99□□□□□ -0.65
USHBP1-201ENST00000252597 SFXN5Q8TD22 340 aa10.99□□□□□ -0.65
USHBP1-201ENST00000252597 ASB12Q8WXK4 309 aa10.99□□□□□ -0.65
USHBP1-201ENST00000252597 SGTBQ96EQ0 304 aa10.99□□□□□ -0.65
USHBP1-201ENST00000252597 LINC00615Q96LM1 132 aaPredicted RBP10.99□□□□□ -0.65
USHBP1-201ENST00000252597 ZNF681Q96N22 645 aa10.99□□□□□ -0.65
USHBP1-201ENST00000252597 ZNF471Q9BX82 626 aaPredicted RBP10.99□□□□□ -0.65
USHBP1-201ENST00000252597 MFFQ9GZY8 342 aa10.99□□□□□ -0.65
USHBP1-201ENST00000252597 ATG5Q9H1Y0 275 aa10.99□□□□□ -0.65
USHBP1-201ENST00000252597 PPA2Q9H2U2 334 aa10.99□□□□□ -0.65
USHBP1-201ENST00000252597 COPZ2Q9P299 210 aa10.99□□□□□ -0.65
USHBP1-201ENST00000252597 ADAM29Q9UKF5 820 aa10.99□□□□□ -0.65
USHBP1-201ENST00000252597 RABL2BQ9UNT1 228 aa10.99□□□□□ -0.65
USHBP1-201ENST00000252597 GIMAP1-GIMAP5A0A087WTJ2 511 aa10.98□□□□□ -0.65
USHBP1-201ENST00000252597 RPS10-NUDT3A0A1W2PQS6 291 aa10.98□□□□□ -0.65
USHBP1-201ENST00000252597 ITGA10O75578 1167 aa10.98□□□□□ -0.65
USHBP1-201ENST00000252597 NGFRP08138 427 aa10.98□□□□□ -0.65
USHBP1-201ENST00000252597 RRASP10301 218 aa10.98□□□□□ -0.65
USHBP1-201ENST00000252597 M6PRP20645 277 aa10.98□□□□□ -0.65
USHBP1-201ENST00000252597 PPP1CAP62136 330 aa10.98□□□□□ -0.65
USHBP1-201ENST00000252597 ZNHIT3Q15649 155 aaPredicted RBP10.98□□□□□ -0.65
USHBP1-201ENST00000252597 C2orf68Q2NKX9 166 aa10.98□□□□□ -0.65
USHBP1-201ENST00000252597 PLPP7Q8NBV4 271 aa10.98□□□□□ -0.65
USHBP1-201ENST00000252597 CHST4Q8NCG5 386 aa10.98□□□□□ -0.65
USHBP1-201ENST00000252597 OR51A4Q8NGJ6 313 aa10.98□□□□□ -0.65
USHBP1-201ENST00000252597 ZNF563Q8TA94 476 aa10.98□□□□□ -0.65
USHBP1-201ENST00000252597 PHOSPHO1Q8TCT1 267 aa10.98□□□□□ -0.65
USHBP1-201ENST00000252597 WFIKKN2Q8TEU8 576 aa10.98□□□□□ -0.65
USHBP1-201ENST00000252597 SMIM4Q8WVI0 70 aa10.98□□□□□ -0.65
USHBP1-201ENST00000252597 TMEM106AQ96A25 262 aa10.98□□□□□ -0.65
USHBP1-201ENST00000252597 MOAP1Q96BY2 351 aa10.98□□□□□ -0.65
USHBP1-201ENST00000252597 ZNF707Q96C28 371 aaPredicted RBP10.98□□□□□ -0.65
USHBP1-201ENST00000252597 SMIM19Q96E16 107 aa10.98□□□□□ -0.65
USHBP1-201ENST00000252597 GIMAP5Q96F15 307 aa10.98□□□□□ -0.65
USHBP1-201ENST00000252597 GAL3ST4Q96RP7 486 aa10.98□□□□□ -0.65
USHBP1-201ENST00000252597 CHST6Q9GZX3 395 aa10.98□□□□□ -0.65
USHBP1-201ENST00000252597 C2orf42Q9NWW7 574 aa10.98□□□□□ -0.65
USHBP1-201ENST00000252597 MED11Q9P086 117 aa10.98□□□□□ -0.65
USHBP1-201ENST00000252597 POMT2Q9UKY4 750 aa10.98□□□□□ -0.65
USHBP1-201ENST00000252597 COLEC10Q9Y6Z7 277 aa10.98□□□□□ -0.65
USHBP1-201ENST00000252597 MDC1Q14676 2089 aaKnown RBP10.98□□□□□ -0.65
USHBP1-201ENST00000252597 PLXNB3Q9ULL4 1909 aa10.98□□□□□ -0.65
USHBP1-201ENST00000252597 LINC00862A6NCI5 91 aa10.98□□□□□ -0.65
USHBP1-201ENST00000252597 OR6C68A6NDL8 312 aa10.98□□□□□ -0.65
USHBP1-201ENST00000252597 IFITM5A6NNB3 132 aa10.98□□□□□ -0.65
USHBP1-201ENST00000252597 OR6A2O95222 327 aa10.98□□□□□ -0.65
USHBP1-201ENST00000252597 EGFP01133 1207 aa10.98□□□□□ -0.65
USHBP1-201ENST00000252597 VAMP1P23763 118 aa10.98□□□□□ -0.65
USHBP1-201ENST00000252597 MAOBP27338 520 aa10.98□□□□□ -0.65
USHBP1-201ENST00000252597 MMP15P51511 669 aa10.98□□□□□ -0.65
USHBP1-201ENST00000252597 NANOS3P60323 173 aaKnown RBP10.98□□□□□ -0.65
USHBP1-201ENST00000252597 FAM53BQ14153 422 aa10.98□□□□□ -0.65
USHBP1-201ENST00000252597 MFSD13AQ14CX5 517 aa10.98□□□□□ -0.65
USHBP1-201ENST00000252597 CLLU1Q5K131 121 aa10.98□□□□□ -0.65
USHBP1-201ENST00000252597 LIPNQ5VXI9 398 aa10.98□□□□□ -0.65
USHBP1-201ENST00000252597 KIRREL2Q6UWL6 708 aa10.98□□□□□ -0.65
USHBP1-201ENST00000252597 KCTD9Q7L273 389 aa10.98□□□□□ -0.65
USHBP1-201ENST00000252597 CD163Q86VB7 1156 aa10.98□□□□□ -0.65
USHBP1-201ENST00000252597 GLB1L2Q8IW92 636 aa10.98□□□□□ -0.65
USHBP1-201ENST00000252597 SLC17A9Q9BYT1 436 aa10.98□□□□□ -0.65
USHBP1-201ENST00000252597 C14orf105Q9NVL8 296 aa10.98□□□□□ -0.65
USHBP1-201ENST00000252597 FLRT3Q9NZU0 649 aa10.98□□□□□ -0.65
USHBP1-201ENST00000252597 ABRACLQ9P1F3 81 aa10.98□□□□□ -0.65
USHBP1-201ENST00000252597 FBXO4Q9UKT5 387 aa10.98□□□□□ -0.65
USHBP1-201ENST00000252597 CES1P1Q9UKY3 287 aa10.98□□□□□ -0.65
USHBP1-201ENST00000252597 COL4A6Q14031 1691 aa10.98□□□□□ -0.65
USHBP1-201ENST00000252597 EIF1AYO14602 144 aaKnown RBP10.97□□□□□ -0.65
USHBP1-201ENST00000252597 SHOXO15266 292 aa10.97□□□□□ -0.65
USHBP1-201ENST00000252597 CTNSO60931 367 aa10.97□□□□□ -0.65
USHBP1-201ENST00000252597 NDUFB2O95178 105 aa10.97□□□□□ -0.65
USHBP1-201ENST00000252597 DRD3P35462 400 aa10.97□□□□□ -0.65
USHBP1-201ENST00000252597 EIF1AXP47813 144 aaKnown RBP10.97□□□□□ -0.65
USHBP1-201ENST00000252597 CTXN1P60606 82 aa10.97□□□□□ -0.65
USHBP1-201ENST00000252597 TNFRSF17Q02223 184 aa10.97□□□□□ -0.65
USHBP1-201ENST00000252597 DPTQ07507 201 aa10.97□□□□□ -0.65
USHBP1-201ENST00000252597 BIKQ13323 160 aa10.97□□□□□ -0.65
USHBP1-201ENST00000252597 ENPP2Q13822 863 aa10.97□□□□□ -0.65
USHBP1-201ENST00000252597 OR2L8Q8NGY9 312 aa10.97□□□□□ -0.65
USHBP1-201ENST00000252597 FAM46BQ96A09 425 aa10.97□□□□□ -0.65
USHBP1-201ENST00000252597 ACTR6Q9GZN1 396 aa10.97□□□□□ -0.65
USHBP1-201ENST00000252597 HRASLS2Q9NWW9 162 aa10.97□□□□□ -0.65
USHBP1-201ENST00000252597 AKAP7Q9P0M2 348 aaPredicted RBP10.97□□□□□ -0.65
USHBP1-201ENST00000252597 LAMP5Q9UJQ1 280 aa10.97□□□□□ -0.65
USHBP1-201ENST00000252597 NPFFR2Q9Y5X5 522 aa10.97□□□□□ -0.65
USHBP1-201ENST00000252597 ARHGEF17Q96PE2 2063 aaPredicted RBP10.97□□□□□ -0.65
USHBP1-201ENST00000252597 A0A0A6YYC8 382 aaPredicted RBP10.97□□□□□ -0.65
USHBP1-201ENST00000252597 TSPAN11A1L157 253 aa10.97□□□□□ -0.65
USHBP1-201ENST00000252597 I3L1I5 382 aaPredicted RBP10.97□□□□□ -0.65
USHBP1-201ENST00000252597 CTSBP07858 339 aa10.97□□□□□ -0.65
USHBP1-201ENST00000252597 P2RX1P51575 399 aa10.97□□□□□ -0.65
USHBP1-201ENST00000252597 TRA2BP62995 288 aaKnown RBP10.97□□□□□ -0.65
USHBP1-201ENST00000252597 ACTC1P68032 377 aa10.97□□□□□ -0.65
USHBP1-201ENST00000252597 ACTA1P68133 377 aa10.97□□□□□ -0.65
USHBP1-201ENST00000252597 KLF9Q13886 244 aaPredicted RBP10.97□□□□□ -0.65
USHBP1-201ENST00000252597 UBE2NLQ5JXB2 153 aa10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms