RNA–Protein interactions for RNA: ENST00000238379.9

HDHD3-201, Transcript of haloacid dehalogenase like hydrolase domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDHD3, Length 1,834 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD3-201ENST00000238379 OR9Q1Q8NGQ5 310 aa13.72□□□□□ -0.21
HDHD3-201ENST00000238379 ZBTB8AQ96BR9 441 aa13.72□□□□□ -0.21
HDHD3-201ENST00000238379 FER1L6-AS2Q96M78 137 aa13.72□□□□□ -0.21
HDHD3-201ENST00000238379 MGLLQ99685 303 aa13.72□□□□□ -0.21
HDHD3-201ENST00000238379 ZNF649Q9BS31 505 aa13.72□□□□□ -0.21
HDHD3-201ENST00000238379 MND1Q9BWT6 205 aa13.72□□□□□ -0.21
HDHD3-201ENST00000238379 NMNAT2Q9BZQ4 307 aa13.72□□□□□ -0.21
HDHD3-201ENST00000238379 NDEL1Q9GZM8 345 aa13.72□□□□□ -0.21
HDHD3-201ENST00000238379 SERINC1Q9NRX5 453 aa13.72□□□□□ -0.21
HDHD3-201ENST00000238379 SACM1LQ9NTJ5 587 aa13.72□□□□□ -0.21
HDHD3-201ENST00000238379 MRPL39Q9NYK5 338 aaKnown RBP13.72□□□□□ -0.21
HDHD3-201ENST00000238379 TEKT2Q9UIF3 430 aa13.72□□□□□ -0.21
HDHD3-201ENST00000238379 A0A0G2JMM0 328 aa13.71□□□□□ -0.21
HDHD3-201ENST00000238379 A0A1W2PPB8 328 aa13.71□□□□□ -0.21
HDHD3-201ENST00000238379 A0A1W2PRS3 328 aa13.71□□□□□ -0.21
HDHD3-201ENST00000238379 OR6C68A6NDL8 312 aa13.71□□□□□ -0.21
HDHD3-201ENST00000238379 KIR3DP1A8MWS1 328 aa13.71□□□□□ -0.21
HDHD3-201ENST00000238379 H3BML4 177 aa13.71□□□□□ -0.21
HDHD3-201ENST00000238379 PLPP3O14495 311 aa13.71□□□□□ -0.21
HDHD3-201ENST00000238379 GYPBP06028 91 aa13.71□□□□□ -0.21
HDHD3-201ENST00000238379 LIMS3P0CW19 117 aa13.71□□□□□ -0.21
HDHD3-201ENST00000238379 LIMS4P0CW20 117 aa13.71□□□□□ -0.21
HDHD3-201ENST00000238379 TFPIP10646 304 aa13.71□□□□□ -0.21
HDHD3-201ENST00000238379 IMPDH2P12268 514 aa13.71□□□□□ -0.21
HDHD3-201ENST00000238379 CD36P16671 472 aa13.71□□□□□ -0.21
HDHD3-201ENST00000238379 MYL12AP19105 171 aa13.71□□□□□ -0.21
HDHD3-201ENST00000238379 ITGA3P26006 1051 aa13.71□□□□□ -0.21
HDHD3-201ENST00000238379 DPP4P27487 766 aa13.71□□□□□ -0.21
HDHD3-201ENST00000238379 CD96P40200 585 aa13.71□□□□□ -0.21
HDHD3-201ENST00000238379 CDKN2AP42771 156 aaKnown RBP13.71□□□□□ -0.21
HDHD3-201ENST00000238379 DNASE1L1P49184 302 aa13.71□□□□□ -0.21
HDHD3-201ENST00000238379 DSCR4P56555 118 aaPredicted RBP13.71□□□□□ -0.21
HDHD3-201ENST00000238379 CAMK2BQ13554 666 aa13.71□□□□□ -0.21
HDHD3-201ENST00000238379 MFSD13AQ14CX5 517 aa13.71□□□□□ -0.21
HDHD3-201ENST00000238379 CTF1Q16619 201 aa13.71□□□□□ -0.21
HDHD3-201ENST00000238379 ARMCX4Q5H9R4 360 aa13.71□□□□□ -0.21
HDHD3-201ENST00000238379 EMC4Q5J8M3 183 aa13.71□□□□□ -0.21
HDHD3-201ENST00000238379 ATP1A1-AS1Q5TC04 95 aa13.71□□□□□ -0.21
HDHD3-201ENST00000238379 ABHD17BQ5VST6 288 aa13.71□□□□□ -0.21
HDHD3-201ENST00000238379 C3orf33Q6P1S2 294 aa13.71□□□□□ -0.21
HDHD3-201ENST00000238379 P2RY8Q86VZ1 359 aa13.71□□□□□ -0.21
HDHD3-201ENST00000238379 ZNF417Q8TAU3 575 aa13.71□□□□□ -0.21
HDHD3-201ENST00000238379 ZPLD1Q8TCW7 415 aa13.71□□□□□ -0.21
HDHD3-201ENST00000238379 TSPAN32Q96QS1 320 aa13.71□□□□□ -0.21
HDHD3-201ENST00000238379 UBL7Q96S82 380 aaPredicted RBP13.71□□□□□ -0.21
HDHD3-201ENST00000238379 ZNF587Q96SQ5 575 aaPredicted RBP13.71□□□□□ -0.21
HDHD3-201ENST00000238379 JAM3Q9BX67 310 aa13.71□□□□□ -0.21
HDHD3-201ENST00000238379 ASPNQ9BXN1 380 aa13.71□□□□□ -0.21
HDHD3-201ENST00000238379 CXorf56Q9H5V9 222 aa13.71□□□□□ -0.21
HDHD3-201ENST00000238379 HAO2Q9NYQ3 351 aa13.71□□□□□ -0.21
HDHD3-201ENST00000238379 TNFRSF10DQ9UBN6 386 aa13.71□□□□□ -0.21
HDHD3-201ENST00000238379 GRHPRQ9UBQ7 328 aa13.71□□□□□ -0.21
HDHD3-201ENST00000238379 EXOSC1Q9Y3B2 195 aaKnown RBP13.71□□□□□ -0.21
HDHD3-201ENST00000238379 FREM2Q5SZK8 3169 aa13.71□□□□□ -0.21
HDHD3-201ENST00000238379 TMEM129A0AVI4 362 aa13.71□□□□□ -0.22
HDHD3-201ENST00000238379 MYL12BO14950 172 aa13.71□□□□□ -0.22
HDHD3-201ENST00000238379 ZIC3O60481 467 aa13.71□□□□□ -0.22
HDHD3-201ENST00000238379 NOL3O60936 208 aaKnown RBP13.71□□□□□ -0.22
HDHD3-201ENST00000238379 FZD7O75084 574 aa13.71□□□□□ -0.22
HDHD3-201ENST00000238379 CBR3O75828 277 aa13.71□□□□□ -0.22
HDHD3-201ENST00000238379 GABARAPO95166 117 aa13.71□□□□□ -0.22
HDHD3-201ENST00000238379 HSMCR30P0CW71 290 aa13.71□□□□□ -0.22
HDHD3-201ENST00000238379 IDUAP35475 653 aa13.71□□□□□ -0.22
HDHD3-201ENST00000238379 ATP6V1E1P36543 226 aa13.71□□□□□ -0.22
HDHD3-201ENST00000238379 RPS7P62081 194 aaKnown RBP13.71□□□□□ -0.22
HDHD3-201ENST00000238379 OC90Q02509 493 aaPredicted RBP13.71□□□□□ -0.22
HDHD3-201ENST00000238379 GPR139Q6DWJ6 353 aa13.71□□□□□ -0.22
HDHD3-201ENST00000238379 VASH2Q86V25 355 aa13.71□□□□□ -0.22
HDHD3-201ENST00000238379 ERI1Q8IV48 349 aaKnown RBP13.71□□□□□ -0.22
HDHD3-201ENST00000238379 GTPBP8Q8N3Z3 284 aaPredicted RBP13.71□□□□□ -0.22
HDHD3-201ENST00000238379 CLEC1AQ8NC01 280 aa13.71□□□□□ -0.22
HDHD3-201ENST00000238379 OR51G2Q8NGK0 314 aa13.71□□□□□ -0.22
HDHD3-201ENST00000238379 JSRP1Q96MG2 331 aaPredicted RBP13.71□□□□□ -0.22
HDHD3-201ENST00000238379 TSC22D3Q99576 134 aa13.71□□□□□ -0.22
HDHD3-201ENST00000238379 INIPQ9NRY2 104 aa13.71□□□□□ -0.22
HDHD3-201ENST00000238379 ZNF346Q9UL40 294 aaKnown RBP13.71□□□□□ -0.22
HDHD3-201ENST00000238379 CORINQ9Y5Q5 1042 aa13.71□□□□□ -0.22
HDHD3-201ENST00000238379 CNTRLQ7Z7A1 2325 aa13.7□□□□□ -0.22
HDHD3-201ENST00000238379 LIPT2A6NK58 231 aa13.7□□□□□ -0.22
HDHD3-201ENST00000238379 C11orf98E9PRG8 122 aa13.7□□□□□ -0.22
HDHD3-201ENST00000238379 NR4A1P22736 598 aa13.7□□□□□ -0.22
HDHD3-201ENST00000238379 RGS6P49758 472 aa13.7□□□□□ -0.22
HDHD3-201ENST00000238379 SLC16A1P53985 500 aa13.7□□□□□ -0.22
HDHD3-201ENST00000238379 MYBPHQ13203 477 aa13.7□□□□□ -0.22
HDHD3-201ENST00000238379 RTP5Q14D33 572 aa13.7□□□□□ -0.22
HDHD3-201ENST00000238379 OR7A5Q15622 319 aa13.7□□□□□ -0.22
HDHD3-201ENST00000238379 ZNF800Q2TB10 664 aaPredicted RBP eCLIP13.7□□□□□ -0.22
HDHD3-201ENST00000238379 MESTQ5EB52 335 aa13.7□□□□□ -0.22
HDHD3-201ENST00000238379 LEG1Q6P5S2 330 aa13.7□□□□□ -0.22
HDHD3-201ENST00000238379 ZNF485Q8NCK3 441 aa13.7□□□□□ -0.22
HDHD3-201ENST00000238379 ZNRF4Q8WWF5 429 aa13.7□□□□□ -0.22
HDHD3-201ENST00000238379 OPALINQ96PE5 141 aa13.7□□□□□ -0.22
HDHD3-201ENST00000238379 DEPPQ9NTK1 212 aa13.7□□□□□ -0.22
HDHD3-201ENST00000238379 ASB6Q9NWX5 421 aa13.7□□□□□ -0.22
HDHD3-201ENST00000238379 CHCHD3Q9NX63 227 aaKnown RBP13.7□□□□□ -0.22
HDHD3-201ENST00000238379 LRFN1Q9P244 771 aa13.7□□□□□ -0.22
HDHD3-201ENST00000238379 SPIN1Q9Y657 262 aaPredicted RBP13.7□□□□□ -0.22
HDHD3-201ENST00000238379 MED13Q9UHV7 2174 aa13.7□□□□□ -0.22
HDHD3-201ENST00000238379 RNF13O43567 381 aa13.69□□□□□ -0.22
HDHD3-201ENST00000238379 SERPINI2O75830 405 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms