RNA–Protein interactions for RNA: ENST00000233027.9

NEK4-201, Transcript of NIMA related kinase 4, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene NEK4, Length 6,057 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK4-201ENST00000233027 RFPL4BQ6ZWI9 263 aa12.41□□□□□ -0.42
NEK4-201ENST00000233027 OR6T1Q8NGN1 323 aa12.41□□□□□ -0.42
NEK4-201ENST00000233027 AMDHD1Q96NU7 426 aa12.41□□□□□ -0.42
NEK4-201ENST00000233027 SEC22CQ9BRL7 303 aa12.41□□□□□ -0.42
NEK4-201ENST00000233027 PPT2Q9UMR5 302 aa12.41□□□□□ -0.42
NEK4-201ENST00000233027 P2RY10O00398 339 aa12.4□□□□□ -0.42
NEK4-201ENST00000233027 CTU2Q2VPK5 515 aaKnown RBP12.4□□□□□ -0.42
NEK4-201ENST00000233027 CLDN22Q8N7P3 220 aa12.4□□□□□ -0.42
NEK4-201ENST00000233027 MS4A8Q9BY19 250 aa12.4□□□□□ -0.42
NEK4-201ENST00000233027 LRIT1Q9P2V4 623 aa12.4□□□□□ -0.42
NEK4-201ENST00000233027 LOC102725191A0A1B0GVB3 256 aa12.4□□□□□ -0.42
NEK4-201ENST00000233027 SLC16A6O15403 523 aa12.4□□□□□ -0.42
NEK4-201ENST00000233027 B4GALT3O60512 393 aa12.4□□□□□ -0.42
NEK4-201ENST00000233027 OR2T7P0C7T2 308 aa12.4□□□□□ -0.42
NEK4-201ENST00000233027 RPS19P39019 145 aaKnown RBP12.4□□□□□ -0.42
NEK4-201ENST00000233027 CLDN17P56750 224 aa12.4□□□□□ -0.42
NEK4-201ENST00000233027 RPP30P78346 268 aaKnown RBP12.4□□□□□ -0.42
NEK4-201ENST00000233027 REEP5Q00765 189 aa12.4□□□□□ -0.42
NEK4-201ENST00000233027 OR52W1Q6IF63 320 aa12.4□□□□□ -0.42
NEK4-201ENST00000233027 OR2T27Q8NH04 317 aa12.4□□□□□ -0.42
NEK4-201ENST00000233027 SMAP2Q8WU79 429 aaPredicted RBP12.4□□□□□ -0.42
NEK4-201ENST00000233027 TMEM106AQ96A25 262 aa12.4□□□□□ -0.42
NEK4-201ENST00000233027 RASD2Q96D21 266 aa12.4□□□□□ -0.42
NEK4-201ENST00000233027 ULBP2Q9BZM5 246 aa12.4□□□□□ -0.42
NEK4-201ENST00000233027 EMC9Q9Y3B6 208 aa12.4□□□□□ -0.42
NEK4-201ENST00000233027 H3BQ06 376 aaPredicted RBP12.4□□□□□ -0.42
NEK4-201ENST00000233027 TGFBR1P36897 503 aa12.4□□□□□ -0.42
NEK4-201ENST00000233027 ATP1B3P54709 279 aa12.4□□□□□ -0.42
NEK4-201ENST00000233027 TAS2R46P59540 309 aa12.4□□□□□ -0.42
NEK4-201ENST00000233027 HEPHL1Q6MZM0 1159 aa12.4□□□□□ -0.42
NEK4-201ENST00000233027 Q6ZNX1 250 aa12.4□□□□□ -0.42
NEK4-201ENST00000233027 OR6V1Q8N148 313 aa12.4□□□□□ -0.42
NEK4-201ENST00000233027 WWTR1Q9GZV5 400 aa12.4□□□□□ -0.42
NEK4-201ENST00000233027 C19orf12Q9NSK7 152 aa12.4□□□□□ -0.42
NEK4-201ENST00000233027 LUZP4Q9P127 313 aa12.4□□□□□ -0.42
NEK4-201ENST00000233027 TRAPPC2LH3BP13 241 aa12.4□□□□□ -0.42
NEK4-201ENST00000233027 YIF1BQ5BJH7 314 aa12.4□□□□□ -0.42
NEK4-201ENST00000233027 LACC1Q8IV20 430 aa12.4□□□□□ -0.42
NEK4-201ENST00000233027 ZNF454Q8N9F8 522 aa12.4□□□□□ -0.42
NEK4-201ENST00000233027 WDSUB1Q8N9V3 476 aa12.4□□□□□ -0.42
NEK4-201ENST00000233027 ZNF845Q96IR2 970 aaPredicted RBP12.4□□□□□ -0.42
NEK4-201ENST00000233027 METTL9Q9H1A3 318 aa12.4□□□□□ -0.42
NEK4-201ENST00000233027 CBX7O95931 251 aa12.4□□□□□ -0.43
NEK4-201ENST00000233027 ARNTP27540 789 aa12.4□□□□□ -0.43
NEK4-201ENST00000233027 PKLRP30613 574 aa12.4□□□□□ -0.43
NEK4-201ENST00000233027 SYT6Q5T7P8 510 aaPredicted RBP12.4□□□□□ -0.43
NEK4-201ENST00000233027 HIST2H3PS2Q5TEC6 136 aa12.4□□□□□ -0.43
NEK4-201ENST00000233027 NKAIN2Q5VXU1 208 aa12.4□□□□□ -0.43
NEK4-201ENST00000233027 MMP21Q8N119 569 aa12.4□□□□□ -0.43
NEK4-201ENST00000233027 ISL2Q96A47 359 aa12.4□□□□□ -0.43
NEK4-201ENST00000233027 BORCS7Q96B45 105 aa12.4□□□□□ -0.43
NEK4-201ENST00000233027 RAB3CQ96E17 227 aa12.4□□□□□ -0.43
NEK4-201ENST00000233027 SLC19A3Q9BZV2 496 aa12.4□□□□□ -0.43
NEK4-201ENST00000233027 SERINC4A6NH21 518 aa12.39□□□□□ -0.43
NEK4-201ENST00000233027 ZNF780AO75290 641 aaPredicted RBP12.39□□□□□ -0.43
NEK4-201ENST00000233027 BDH1Q02338 343 aa12.39□□□□□ -0.43
NEK4-201ENST00000233027 SLC36A2Q495M3 483 aa12.39□□□□□ -0.43
NEK4-201ENST00000233027 NEURL3Q96EH8 262 aa12.39□□□□□ -0.43
NEK4-201ENST00000233027 PKMYT1Q99640 499 aa12.39□□□□□ -0.43
NEK4-201ENST00000233027 SUCNR1Q9BXA5 334 aa12.39□□□□□ -0.43
NEK4-201ENST00000233027 A0A1W2PPV4 95 aa12.39□□□□□ -0.43
NEK4-201ENST00000233027 HSBP1L1C9JCN9 74 aa12.39□□□□□ -0.43
NEK4-201ENST00000233027 SLC43A1O75387 559 aa12.39□□□□□ -0.43
NEK4-201ENST00000233027 IGFBP1P08833 259 aaPredicted RBP12.39□□□□□ -0.43
NEK4-201ENST00000233027 HTR5AP47898 357 aa12.39□□□□□ -0.43
NEK4-201ENST00000233027 PRAMEF20Q5VT98 475 aa12.39□□□□□ -0.43
NEK4-201ENST00000233027 ANKRD34AQ69YU3 496 aa12.39□□□□□ -0.43
NEK4-201ENST00000233027 C19orf47Q8N9M1 422 aaKnown RBP12.39□□□□□ -0.43
NEK4-201ENST00000233027 KCTD12Q96CX2 325 aaKnown RBP12.39□□□□□ -0.43
NEK4-201ENST00000233027 NECTIN4Q96NY8 510 aa12.39□□□□□ -0.43
NEK4-201ENST00000233027 ZNF286AQ9HBT8 521 aa12.39□□□□□ -0.43
NEK4-201ENST00000233027 SIDT1Q9NXL6 827 aaKnown RBP12.39□□□□□ -0.43
NEK4-201ENST00000233027 GFRA2O00451 464 aa12.39□□□□□ -0.43
NEK4-201ENST00000233027 RAB5CP51148 216 aa12.39□□□□□ -0.43
NEK4-201ENST00000233027 RACK1P63244 317 aaKnown RBP12.39□□□□□ -0.43
NEK4-201ENST00000233027 ARG2P78540 354 aa12.39□□□□□ -0.43
NEK4-201ENST00000233027 MPEG1Q2M385 716 aa12.39□□□□□ -0.43
NEK4-201ENST00000233027 FAM78AQ5JUQ0 283 aa12.39□□□□□ -0.43
NEK4-201ENST00000233027 SLX4IPQ5VYV7 408 aa12.39□□□□□ -0.43
NEK4-201ENST00000233027 DLEU7Q6UYE1 221 aa12.39□□□□□ -0.43
NEK4-201ENST00000233027 CHTF18Q8WVB6 975 aa12.39□□□□□ -0.43
NEK4-201ENST00000233027 ZIC5Q96T25 663 aa12.39□□□□□ -0.43
NEK4-201ENST00000233027 CHST8Q9H2A9 424 aa12.39□□□□□ -0.43
NEK4-201ENST00000233027 WDR76Q9H967 626 aa12.39□□□□□ -0.43
NEK4-201ENST00000233027 PRMT8Q9NR22 394 aaPredicted RBP12.39□□□□□ -0.43
NEK4-201ENST00000233027 MCTS1Q9ULC4 181 aaKnown RBP12.39□□□□□ -0.43
NEK4-201ENST00000233027 TMEM202A6NGA9 273 aa12.39□□□□□ -0.43
NEK4-201ENST00000233027 CR2P20023 1033 aa12.39□□□□□ -0.43
NEK4-201ENST00000233027 BCL6P41182 706 aa12.39□□□□□ -0.43
NEK4-201ENST00000233027 UBE2KP61086 200 aa12.39□□□□□ -0.43
NEK4-201ENST00000233027 TMEM176BQ3YBM2 270 aaPredicted RBP12.39□□□□□ -0.43
NEK4-201ENST00000233027 CST9LP1Q5W188 147 aa12.39□□□□□ -0.43
NEK4-201ENST00000233027 PLPP7Q8NBV4 271 aa12.39□□□□□ -0.43
NEK4-201ENST00000233027 WFDC5Q8TCV5 224 aa12.39□□□□□ -0.43
NEK4-201ENST00000233027 POFUT1Q9H488 388 aa12.39□□□□□ -0.43
NEK4-201ENST00000233027 OBP2BQ9NPH6 170 aa12.39□□□□□ -0.43
NEK4-201ENST00000233027 MRPS28Q9Y2Q9 187 aaKnown RBP12.39□□□□□ -0.43
NEK4-201ENST00000233027 DDX60Q8IY21 1712 aaKnown RBP12.39□□□□□ -0.43
NEK4-201ENST00000233027 A0A1B0GWA3 101 aa12.38□□□□□ -0.43
NEK4-201ENST00000233027 GPRIN2O60269 458 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms