RNA–Protein interactions for RNA: ENST00000230480.10

VEGFA-201, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 993 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-201ENST00000230480 EGFL7Q9UHF1 273 aa12.11□□□□□ -0.47
VEGFA-201ENST00000230480 SLC7A7Q9UM01 511 aa12.11□□□□□ -0.47
VEGFA-201ENST00000230480 DSCAMO60469 2012 aa12.11□□□□□ -0.47
VEGFA-201ENST00000230480 ITPR3Q14573 2671 aa12.11□□□□□ -0.47
VEGFA-201ENST00000230480 ACANP16112 2415 aa12.1□□□□□ -0.47
VEGFA-201ENST00000230480 USF3Q68DE3 2245 aa12.1□□□□□ -0.47
VEGFA-201ENST00000230480 TRAV36DV7A0A075B6V5 113 aa12.1□□□□□ -0.47
VEGFA-201ENST00000230480 LOC102725191A0A1B0GVB3 256 aa12.1□□□□□ -0.47
VEGFA-201ENST00000230480 TRAPPC13A5PLN9 417 aa12.1□□□□□ -0.47
VEGFA-201ENST00000230480 J3KTA2 159 aa12.1□□□□□ -0.47
VEGFA-201ENST00000230480 TRAF3IP2O43734 574 aaPredicted RBP12.1□□□□□ -0.47
VEGFA-201ENST00000230480 SEMG1P04279 462 aa12.1□□□□□ -0.47
VEGFA-201ENST00000230480 CBLP22681 906 aa12.1□□□□□ -0.47
VEGFA-201ENST00000230480 UGT2B15P54855 530 aa12.1□□□□□ -0.47
VEGFA-201ENST00000230480 FHL1Q13642 323 aa12.1□□□□□ -0.47
VEGFA-201ENST00000230480 LRRC23Q53EV4 343 aaPredicted RBP12.1□□□□□ -0.47
VEGFA-201ENST00000230480 PHYHD1Q5SRE7 291 aa12.1□□□□□ -0.47
VEGFA-201ENST00000230480 FAM69AQ5T7M9 428 aa12.1□□□□□ -0.47
VEGFA-201ENST00000230480 CDC20BQ86Y33 519 aa12.1□□□□□ -0.47
VEGFA-201ENST00000230480 PGAM4Q8N0Y7 254 aa12.1□□□□□ -0.47
VEGFA-201ENST00000230480 S100PBPQ96BU1 408 aa12.1□□□□□ -0.47
VEGFA-201ENST00000230480 C7orf34Q96L11 122 aa12.1□□□□□ -0.47
VEGFA-201ENST00000230480 ZNF570Q96NI8 536 aa12.1□□□□□ -0.47
VEGFA-201ENST00000230480 C20orf141Q9NUB4 165 aa12.1□□□□□ -0.47
VEGFA-201ENST00000230480 TAS2R5Q9NYW4 299 aa12.1□□□□□ -0.47
VEGFA-201ENST00000230480 MALT1Q9UDY8 824 aa12.1□□□□□ -0.47
VEGFA-201ENST00000230480 RIMS3Q9UJD0 308 aa12.1□□□□□ -0.47
VEGFA-201ENST00000230480 GPR52Q9Y2T5 361 aa12.1□□□□□ -0.47
VEGFA-201ENST00000230480 F8P00451 2351 aa12.1□□□□□ -0.47
VEGFA-201ENST00000230480 ZNF469Q96JG9 3925 aaPredicted RBP12.09□□□□□ -0.47
VEGFA-201ENST00000230480 UBOX5O94941 541 aa12.09□□□□□ -0.47
VEGFA-201ENST00000230480 AHSA1O95433 338 aa12.09□□□□□ -0.47
VEGFA-201ENST00000230480 PLAUP00749 431 aa12.09□□□□□ -0.47
VEGFA-201ENST00000230480 RPSAP08865 295 aaKnown RBP12.09□□□□□ -0.47
VEGFA-201ENST00000230480 TSPAN19P0C672 248 aa12.09□□□□□ -0.47
VEGFA-201ENST00000230480 HSD17B1P14061 328 aa12.09□□□□□ -0.47
VEGFA-201ENST00000230480 PEX19P40855 299 aa12.09□□□□□ -0.47
VEGFA-201ENST00000230480 YAP1P46937 504 aaKnown RBP12.09□□□□□ -0.47
VEGFA-201ENST00000230480 SELENOPP49908 381 aa12.09□□□□□ -0.47
VEGFA-201ENST00000230480 TESK1Q15569 626 aa12.09□□□□□ -0.47
VEGFA-201ENST00000230480 TAB1Q15750 504 aa12.09□□□□□ -0.47
VEGFA-201ENST00000230480 ZNF74Q16587 644 aa12.09□□□□□ -0.47
VEGFA-201ENST00000230480 FBXW9Q5XUX1 488 aa12.09□□□□□ -0.47
VEGFA-201ENST00000230480 RINLQ6ZS11 566 aa12.09□□□□□ -0.47
VEGFA-201ENST00000230480 ASRGL1Q7L266 308 aa12.09□□□□□ -0.47
VEGFA-201ENST00000230480 RANBP3LQ86VV4 465 aaPredicted RBP12.09□□□□□ -0.47
VEGFA-201ENST00000230480 WDR31Q8NA23 367 aa12.09□□□□□ -0.47
VEGFA-201ENST00000230480 LILRB1Q8NHL6 650 aaPredicted RBP12.09□□□□□ -0.47
VEGFA-201ENST00000230480 TMEM255BQ8WV15 326 aa12.09□□□□□ -0.47
VEGFA-201ENST00000230480 ZFAND2BQ8WV99 257 aa12.09□□□□□ -0.47
VEGFA-201ENST00000230480 ZNF837Q96EG3 531 aaPredicted RBP12.09□□□□□ -0.47
VEGFA-201ENST00000230480 TXNDC15Q96J42 360 aa12.09□□□□□ -0.47
VEGFA-201ENST00000230480 CDRT15Q96T59 188 aa12.09□□□□□ -0.47
VEGFA-201ENST00000230480 NAA11Q9BSU3 229 aaPredicted RBP12.09□□□□□ -0.47
VEGFA-201ENST00000230480 ACTR6Q9GZN1 396 aa12.09□□□□□ -0.47
VEGFA-201ENST00000230480 OR10A4Q9H209 315 aa12.09□□□□□ -0.47
VEGFA-201ENST00000230480 NELFAQ9H3P2 528 aa12.09□□□□□ -0.47
VEGFA-201ENST00000230480 CACYBPQ9HB71 228 aaKnown RBP12.09□□□□□ -0.47
VEGFA-201ENST00000230480 FANCFQ9NPI8 374 aa12.09□□□□□ -0.47
VEGFA-201ENST00000230480 ETAA1Q9NY74 926 aa12.09□□□□□ -0.47
VEGFA-201ENST00000230480 RPS6KB2Q9UBS0 482 aa12.09□□□□□ -0.47
VEGFA-201ENST00000230480 BAG5Q9UL15 447 aa12.09□□□□□ -0.47
VEGFA-201ENST00000230480 AP3M1Q9Y2T2 418 aa12.09□□□□□ -0.47
VEGFA-201ENST00000230480 NOSIPQ9Y314 301 aaKnown RBP12.09□□□□□ -0.47
VEGFA-201ENST00000230480 PLPP3O14495 311 aa12.08□□□□□ -0.48
VEGFA-201ENST00000230480 GPR171O14626 319 aa12.08□□□□□ -0.48
VEGFA-201ENST00000230480 UPK3AO75631 287 aa12.08□□□□□ -0.48
VEGFA-201ENST00000230480 DCTN3O75935 186 aa12.08□□□□□ -0.48
VEGFA-201ENST00000230480 LYZL6O75951 148 aa12.08□□□□□ -0.48
VEGFA-201ENST00000230480 CNOT4O95628 575 aaKnown RBP12.08□□□□□ -0.48
VEGFA-201ENST00000230480 SERPINA1P01009 418 aa12.08□□□□□ -0.48
VEGFA-201ENST00000230480 ASAH2BP0C7U1 165 aa12.08□□□□□ -0.48
VEGFA-201ENST00000230480 ITGADQ13349 1161 aa12.08□□□□□ -0.48
VEGFA-201ENST00000230480 P2RY6Q15077 328 aa12.08□□□□□ -0.48
VEGFA-201ENST00000230480 GABRA6Q16445 453 aa12.08□□□□□ -0.48
VEGFA-201ENST00000230480 GLYATQ6IB77 296 aa12.08□□□□□ -0.48
VEGFA-201ENST00000230480 H1FNTQ75WM6 255 aaPredicted RBP12.08□□□□□ -0.48
VEGFA-201ENST00000230480 TMEM123Q8N131 208 aa12.08□□□□□ -0.48
VEGFA-201ENST00000230480 ADPRHL1Q8NDY3 354 aa12.08□□□□□ -0.48
VEGFA-201ENST00000230480 PFN4Q8NHR9 129 aa12.08□□□□□ -0.48
VEGFA-201ENST00000230480 SLC26A7Q8TE54 656 aa12.08□□□□□ -0.48
VEGFA-201ENST00000230480 RASSF5Q8WWW0 418 aa12.08□□□□□ -0.48
VEGFA-201ENST00000230480 IGFBPL1Q8WX77 278 aa12.08□□□□□ -0.48
VEGFA-201ENST00000230480 ZHX1-C8orf76Q96EF9 292 aa12.08□□□□□ -0.48
VEGFA-201ENST00000230480 ZC3HAV1LQ96H79 300 aaKnown RBP12.08□□□□□ -0.48
VEGFA-201ENST00000230480 NSL1Q96IY1 281 aa12.08□□□□□ -0.48
VEGFA-201ENST00000230480 TPD52L3Q96J77 140 aa12.08□□□□□ -0.48
VEGFA-201ENST00000230480 HSH2DQ96JZ2 352 aa12.08□□□□□ -0.48
VEGFA-201ENST00000230480 MUS81Q96NY9 551 aa12.08□□□□□ -0.48
VEGFA-201ENST00000230480 OXGR1Q96P68 337 aa12.08□□□□□ -0.48
VEGFA-201ENST00000230480 KCTD14Q9BQ13 255 aaPredicted RBP12.08□□□□□ -0.48
VEGFA-201ENST00000230480 TMEM204Q9BSN7 226 aa12.08□□□□□ -0.48
VEGFA-201ENST00000230480 FUZQ9BT04 418 aa12.08□□□□□ -0.48
VEGFA-201ENST00000230480 SPAG4Q9NPE6 437 aa12.08□□□□□ -0.48
VEGFA-201ENST00000230480 DCAF13Q9NV06 445 aaKnown RBP12.08□□□□□ -0.48
VEGFA-201ENST00000230480 MRPL39Q9NYK5 338 aaKnown RBP12.08□□□□□ -0.48
VEGFA-201ENST00000230480 NPAP1Q9NZP6 1156 aa12.08□□□□□ -0.48
VEGFA-201ENST00000230480 RASD1Q9Y272 281 aa12.08□□□□□ -0.48
VEGFA-201ENST00000230480 CELSR1Q9NYQ6 3014 aa12.07□□□□□ -0.48
VEGFA-201ENST00000230480 OR2T1O43869 369 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms