RNA–Protein interactions for RNA: ENST00000229330.8

HCFC2-201, Transcript of host cell factor C2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HCFC2, Length 5,734 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2-201ENST00000229330 TNFSF12O43508 249 aa12.81□□□□□ -0.36
HCFC2-201ENST00000229330 CTHP32929 405 aa12.81□□□□□ -0.36
HCFC2-201ENST00000229330 CX3CR1P49238 355 aa12.81□□□□□ -0.36
HCFC2-201ENST00000229330 ZNF852Q6ZMS4 543 aa12.81□□□□□ -0.36
HCFC2-201ENST00000229330 ZNF561Q8N587 486 aa12.81□□□□□ -0.36
HCFC2-201ENST00000229330 TMEM255BQ8WV15 326 aa12.81□□□□□ -0.36
HCFC2-201ENST00000229330 ASB17Q8WXJ9 295 aa12.81□□□□□ -0.36
HCFC2-201ENST00000229330 FAM71F1Q96KD3 344 aaPredicted RBP12.81□□□□□ -0.36
HCFC2-201ENST00000229330 TNFRSF13CQ96RJ3 184 aa12.81□□□□□ -0.36
HCFC2-201ENST00000229330 C1orf123Q9NWV4 160 aa12.81□□□□□ -0.36
HCFC2-201ENST00000229330 ADAM29Q9UKF5 820 aa12.81□□□□□ -0.36
HCFC2-201ENST00000229330 CBY1Q9Y3M2 126 aa12.81□□□□□ -0.36
HCFC2-201ENST00000229330 CCSO14618 274 aa12.8□□□□□ -0.36
HCFC2-201ENST00000229330 IMPA1P29218 277 aa12.8□□□□□ -0.36
HCFC2-201ENST00000229330 CSNK1DP48730 415 aa12.8□□□□□ -0.36
HCFC2-201ENST00000229330 TAS2R46P59540 309 aa12.8□□□□□ -0.36
HCFC2-201ENST00000229330 HTRA3P83110 453 aa12.8□□□□□ -0.36
HCFC2-201ENST00000229330 ACVR1Q04771 509 aa12.8□□□□□ -0.36
HCFC2-201ENST00000229330 C19orf57Q0VDD7 668 aa12.8□□□□□ -0.36
HCFC2-201ENST00000229330 MRPL2Q5T653 305 aaKnown RBP12.8□□□□□ -0.36
HCFC2-201ENST00000229330 ALKBH2Q6NS38 261 aa12.8□□□□□ -0.36
HCFC2-201ENST00000229330 KCNIP4Q6PIL6 250 aa12.8□□□□□ -0.36
HCFC2-201ENST00000229330 OR8D4Q8NGM9 314 aa12.8□□□□□ -0.36
HCFC2-201ENST00000229330 RAB3CQ96E17 227 aa12.8□□□□□ -0.36
HCFC2-201ENST00000229330 ASB1Q9Y576 335 aa12.8□□□□□ -0.36
HCFC2-201ENST00000229330 A0A0U1RQK1 487 aa12.8□□□□□ -0.36
HCFC2-201ENST00000229330 HIST1H1TP22492 207 aaPredicted RBP12.8□□□□□ -0.36
HCFC2-201ENST00000229330 ZNF84P51523 738 aa12.8□□□□□ -0.36
HCFC2-201ENST00000229330 PDX1P52945 283 aa12.8□□□□□ -0.36
HCFC2-201ENST00000229330 GPR85P60893 370 aa12.8□□□□□ -0.36
HCFC2-201ENST00000229330 FIP1L1Q6UN15 594 aaKnown RBP12.8□□□□□ -0.36
HCFC2-201ENST00000229330 COX15Q7KZN9 410 aa12.8□□□□□ -0.36
HCFC2-201ENST00000229330 GDF7Q7Z4P5 450 aa12.8□□□□□ -0.36
HCFC2-201ENST00000229330 MDGA2Q7Z553 956 aa12.8□□□□□ -0.36
HCFC2-201ENST00000229330 OR51D1Q8NGF3 324 aa12.8□□□□□ -0.36
HCFC2-201ENST00000229330 BMFQ96LC9 184 aa12.8□□□□□ -0.36
HCFC2-201ENST00000229330 ARHGAP9Q9BRR9 750 aa12.8□□□□□ -0.36
HCFC2-201ENST00000229330 NIPSNAP3BQ9BS92 247 aa12.8□□□□□ -0.36
HCFC2-201ENST00000229330 PTGES2Q9H7Z7 377 aa12.8□□□□□ -0.36
HCFC2-201ENST00000229330 ARRDC5A6NEK1 342 aa12.8□□□□□ -0.36
HCFC2-201ENST00000229330 ZNF888P0CJ79 500 aaPredicted RBP12.8□□□□□ -0.36
HCFC2-201ENST00000229330 CST9Q5W186 159 aa12.8□□□□□ -0.36
HCFC2-201ENST00000229330 OR5M10Q6IEU7 315 aa12.8□□□□□ -0.36
HCFC2-201ENST00000229330 TMEM231Q9H6L2 316 aa12.8□□□□□ -0.36
HCFC2-201ENST00000229330 LRP5O75197 1615 aa12.8□□□□□ -0.36
HCFC2-201ENST00000229330 USP54Q70EL1 1684 aa12.8□□□□□ -0.36
HCFC2-201ENST00000229330 FABP1P07148 127 aa12.8□□□□□ -0.36
HCFC2-201ENST00000229330 CALCBP10092 127 aa12.8□□□□□ -0.36
HCFC2-201ENST00000229330 F3P13726 295 aa12.8□□□□□ -0.36
HCFC2-201ENST00000229330 ZNF28P17035 718 aa12.8□□□□□ -0.36
HCFC2-201ENST00000229330 ACSM1Q08AH1 577 aa12.8□□□□□ -0.36
HCFC2-201ENST00000229330 ALKAL1Q6UXT8 129 aa12.8□□□□□ -0.36
HCFC2-201ENST00000229330 MACROD1Q9BQ69 325 aa12.8□□□□□ -0.36
HCFC2-201ENST00000229330 ALG12Q9BV10 488 aa12.8□□□□□ -0.36
HCFC2-201ENST00000229330 NHSQ6T4R5 1651 aa12.8□□□□□ -0.36
HCFC2-201ENST00000229330 TOGARAM1Q9Y4F4 1720 aa12.8□□□□□ -0.36
HCFC2-201ENST00000229330 ASPDHA6ND91 283 aa12.79□□□□□ -0.36
HCFC2-201ENST00000229330 EPHA1P21709 976 aa12.79□□□□□ -0.36
HCFC2-201ENST00000229330 PRLHRP49683 370 aa12.79□□□□□ -0.36
HCFC2-201ENST00000229330 BBS1Q8NFJ9 593 aa12.79□□□□□ -0.36
HCFC2-201ENST00000229330 SLC41A2Q96JW4 573 aa12.79□□□□□ -0.36
HCFC2-201ENST00000229330 TAF9BQ9HBM6 251 aa12.79□□□□□ -0.36
HCFC2-201ENST00000229330 H7C1Q1 480 aa12.79□□□□□ -0.36
HCFC2-201ENST00000229330 ADH1BP00325 375 aa12.79□□□□□ -0.36
HCFC2-201ENST00000229330 CCNOP22674 350 aa12.79□□□□□ -0.36
HCFC2-201ENST00000229330 RPL23AP62750 156 aaKnown RBP12.79□□□□□ -0.36
HCFC2-201ENST00000229330 SGCBQ16585 318 aa12.79□□□□□ -0.36
HCFC2-201ENST00000229330 EOGTQ5NDL2 527 aa12.79□□□□□ -0.36
HCFC2-201ENST00000229330 FAM71E1Q6IPT2 247 aa12.79□□□□□ -0.36
HCFC2-201ENST00000229330 PTOV1Q86YD1 416 aa12.79□□□□□ -0.36
HCFC2-201ENST00000229330 NPRL2Q8WTW4 380 aa12.79□□□□□ -0.36
HCFC2-201ENST00000229330 FAM3DQ96BQ1 224 aa12.79□□□□□ -0.36
HCFC2-201ENST00000229330 HBE1P02100 147 aa12.79□□□□□ -0.36
HCFC2-201ENST00000229330 ITGB2P05107 769 aa12.79□□□□□ -0.36
HCFC2-201ENST00000229330 UBL4AP11441 157 aa12.79□□□□□ -0.36
HCFC2-201ENST00000229330 BDH1Q02338 343 aa12.79□□□□□ -0.36
HCFC2-201ENST00000229330 OR7E24Q6IFN5 339 aa12.79□□□□□ -0.36
HCFC2-201ENST00000229330 DPPA4Q7L190 304 aa12.79□□□□□ -0.36
HCFC2-201ENST00000229330 PLPP5Q8NEB5 264 aa12.79□□□□□ -0.36
HCFC2-201ENST00000229330 POC1BQ8TC44 478 aa12.79□□□□□ -0.36
HCFC2-201ENST00000229330 SGIP1Q9BQI5 828 aa12.79□□□□□ -0.36
HCFC2-201ENST00000229330 OR11A1Q9GZK7 315 aa12.79□□□□□ -0.36
HCFC2-201ENST00000229330 P2RY12Q9H244 342 aa12.79□□□□□ -0.36
HCFC2-201ENST00000229330 EXOSC3Q9NQT5 275 aaKnown RBP12.79□□□□□ -0.36
HCFC2-201ENST00000229330 MOKQ9UQ07 419 aa12.79□□□□□ -0.36
HCFC2-201ENST00000229330 IGLON5A6NGN9 336 aa12.79□□□□□ -0.36
HCFC2-201ENST00000229330 CNOT4O95628 575 aaKnown RBP12.79□□□□□ -0.36
HCFC2-201ENST00000229330 VASPP50552 380 aaPredicted RBP12.79□□□□□ -0.36
HCFC2-201ENST00000229330 MFGE8Q08431 387 aaPredicted RBP12.79□□□□□ -0.36
HCFC2-201ENST00000229330 ALKBH1Q13686 389 aaKnown RBP12.79□□□□□ -0.36
HCFC2-201ENST00000229330 IGSF11Q5DX21 431 aa12.79□□□□□ -0.36
HCFC2-201ENST00000229330 FAM74A1Q5RGS3 127 aa12.79□□□□□ -0.36
HCFC2-201ENST00000229330 RTL6Q6ICC9 239 aa12.79□□□□□ -0.36
HCFC2-201ENST00000229330 CMTM1Q8IZ96 169 aa12.79□□□□□ -0.36
HCFC2-201ENST00000229330 LOC100289279A0A1B0GTE1 492 aa12.79□□□□□ -0.36
HCFC2-201ENST00000229330 DSCR3O14972 297 aa12.79□□□□□ -0.36
HCFC2-201ENST00000229330 OR2C1O95371 312 aa12.79□□□□□ -0.36
HCFC2-201ENST00000229330 CD53P19397 219 aa12.79□□□□□ -0.36
HCFC2-201ENST00000229330 TEAD1P28347 426 aa12.79□□□□□ -0.36
HCFC2-201ENST00000229330 PFN3P60673 137 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms